Gene annotation
Transcriptome id Sobic.010G087800.1
Synonym Sb10g007600
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
heat shock 22 kDa protein, mitochondrial precursor, putative, expressed
UniProt A0A194YJ36
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF166
NCBI CDD -
KEGG Orthology K13993; HSP20 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51440 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os06g11610.1 : heat shock 22 kDa protein, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a049511 , Zm00025a033133
Brachypodium -
Barley -
Wheat TraesCS7D02G179600 , TraesCS7B02G083500
Populus -


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cDNA sequences
Sobic.010G087800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G009800 expressed protein -
2 Sobic.007G043300 monocopper oxidase, putative, expressed -
3 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.003G271700 - -
5 Sobic.010G038400 expressed protein -
6 Sobic.002G035000 OsGrx_C10 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
7 Sobic.003G038800 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
8 Sobic.002G355900 LTPL64 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
10 Sobic.005G118700 expressed protein -
11 Sobic.004G202800 glycosyl hydrolase family 5 protein, putative, expressed -
12 Sobic.002G410600 - -
13 Sobic.009G046000 desiccation-related protein PCC13-62 precursor, putative, expressed -
14 Sobic.010G236000 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
15 Sobic.001G159100 expressed protein -
16 Sobic.003G038700 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
17 Sobic.002G380800 - -
18 Sobic.010G050100 expressed protein -
19 Sobic.006G006800 expressed protein -
20 Sobic.005G090100 expressed protein -


Gene co-expression network
sample Sobic010G087800 Sobic010G087800 Sobic003G009800 Sobic003G009800 Sobic010G087800--Sobic003G009800 Sobic007G043300 Sobic007G043300 Sobic010G087800--Sobic007G043300 Sobic006G089700 Sobic006G089700 Sobic010G087800--Sobic006G089700 Sobic003G271700 Sobic003G271700 Sobic010G087800--Sobic003G271700 Sobic010G038400 Sobic010G038400 Sobic010G087800--Sobic010G038400 Sobic002G035000 Sobic002G035000 Sobic010G087800--Sobic002G035000 Sobic003G038800 Sobic003G038800 Sobic010G087800--Sobic003G038800 Sobic002G355900 Sobic002G355900 Sobic010G087800--Sobic002G355900 Sobic007G206000 Sobic007G206000 Sobic010G087800--Sobic007G206000 Sobic003G009800--Sobic002G355900 Sobic001G159100 Sobic001G159100 Sobic003G009800--Sobic001G159100 Sobic003G009800--Sobic003G271700 Sobic003G009800--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic003G009800--Sobic010G236000 Sobic002G410600 Sobic002G410600 Sobic003G009800--Sobic002G410600 Sobic003G038700 Sobic003G038700 Sobic003G009800--Sobic003G038700 Sobic007G180700 Sobic007G180700 Sobic003G009800--Sobic007G180700 Sobic004G202800 Sobic004G202800 Sobic003G009800--Sobic004G202800 Sobic007G043300--Sobic010G038400 Sobic007G043300--Sobic010G087800 Sobic003G375300 Sobic003G375300 Sobic007G043300--Sobic003G375300 Sobic003G090700 Sobic003G090700 Sobic007G043300--Sobic003G090700 Sobic007G043300--Sobic003G271700 Sobic007G043300--Sobic002G035000 Sobic010G050100 Sobic010G050100 Sobic007G043300--Sobic010G050100 Sobic007G043300--Sobic006G089700 Sobic007G043300--Sobic003G009800 Sobic006G089700--Sobic007G206000 Sobic006G089700--Sobic010G236000 Sobic006G079500 Sobic006G079500 Sobic006G089700--Sobic006G079500 Sobic006G089700--Sobic004G202800 Sobic006G089700--Sobic003G271700 Sobic006G089700--Sobic002G410600 Sobic006G006800 Sobic006G006800 Sobic006G089700--Sobic006G006800 Sobic004G318800 Sobic004G318800 Sobic006G089700--Sobic004G318800 Sobic006G089700--Sobic003G038700 Sobic009G046000 Sobic009G046000 Sobic003G271700--Sobic009G046000 Sobic003G271700--Sobic006G089700 Sobic003G271700--Sobic007G206000 Sobic003G271700--Sobic010G236000 Sobic003G271700--Sobic004G202800 Sobic003G271700--Sobic002G410600 Sobic005G200700 Sobic005G200700 Sobic003G271700--Sobic005G200700 Sobic003G271700--Sobic003G038700 Sobic003G271700--Sobic006G006800 Sobic010G038400--Sobic010G050100 Sobic010G038400--Sobic009G046000 Sobic010G038400--Sobic003G271700 Sobic005G090100 Sobic005G090100 Sobic010G038400--Sobic005G090100 Sobic010G038400--Sobic006G089700 Sobic010G038400--Sobic010G236000 Sobic010G038400--Sobic007G206000 Sobic010G038400--Sobic002G410600 Sobic010G038400--Sobic007G043300 Sobic002G380800 Sobic002G380800 Sobic002G035000--Sobic002G380800 Sobic002G035000--Sobic003G038800 Sobic002G035000--Sobic009G046000 Sobic002G035000--Sobic002G410600 Sobic002G035000--Sobic003G038700 Sobic006G151800 Sobic006G151800 Sobic002G035000--Sobic006G151800 Sobic005G042200 Sobic005G042200 Sobic002G035000--Sobic005G042200 Sobic002G035000--Sobic007G206000 Sobic002G035000--Sobic005G090100 Sobic003G038800--Sobic002G410600 Sobic003G038800--Sobic003G038700 Sobic003G038800--Sobic002G380800 Sobic003G038800--Sobic007G206000 Sobic003G038800--Sobic009G046000 Sobic003G038800--Sobic005G200700 Sobic001G133200 Sobic001G133200 Sobic003G038800--Sobic001G133200 Sobic002G355900--Sobic003G009800 Sobic002G355900--Sobic001G159100 Sobic002G355900--Sobic007G180700 Sobic003G444400 Sobic003G444400 Sobic002G355900--Sobic003G444400 Sobic006G098300 Sobic006G098300 Sobic002G355900--Sobic006G098300 Sobic002G399600 Sobic002G399600 Sobic002G355900--Sobic002G399600 Sobic002G270400 Sobic002G270400 Sobic002G355900--Sobic002G270400 Sobic006G267400 Sobic006G267400 Sobic002G355900--Sobic006G267400 Sobic007G107500 Sobic007G107500 Sobic002G355900--Sobic007G107500 Sobic007G206000--Sobic003G038700 Sobic005G226500 Sobic005G226500 Sobic007G206000--Sobic005G226500 Sobic007G206000--Sobic002G410600 Sobic007G206000--Sobic010G236000 Sobic008G032400 Sobic008G032400 Sobic007G206000--Sobic008G032400 Sobic006G006900 Sobic006G006900 Sobic007G206000--Sobic006G006900 Sobic007G098600 Sobic007G098600 Sobic007G206000--Sobic007G098600 Sobic007G037400 Sobic007G037400 Sobic007G206000--Sobic007G037400 Sobic007G206000--Sobic007G107500
Octagon: transcription factors


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