Gene annotation
Transcriptome id Sobic.004G313200.1
Synonym Sb04g034530
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5XTH4
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF116
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G05790 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os02g53200.2 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a022261 , Zm00025a050933 , Zm00025a050957 , Zm00025a001555
Brachypodium KQJ86083 , KQK15883 , KQK15882 , PNT62429 , KQK18106 , PNT66703 , PNT66704 , KQK01695
Barley HORVU7Hr1G091100.10 , HORVU7Hr1G091100.11 , HORVU7Hr1G091100.12 , HORVU7Hr1G091100.13 , HORVU7Hr1G091100.14 , HORVU7Hr1G091100.8 , HORVU7Hr1G091100.9 , HORVU7Hr1G091100.2 , HORVU7Hr1G091100.3 , HORVU7Hr1G091100.1 , HORVU7Hr1G091100.6 , HORVU7Hr1G091100.7 , HORVU7Hr1G091100.4 , HORVU5Hr1G084900.10 , HORVU5Hr1G084900.11 , HORVU5Hr1G084900.12 , HORVU5Hr1G084900.13 , HORVU0Hr1G021440.2 , HORVU0Hr1G021440.1 , HORVU2Hr1G044460.4 , HORVU2Hr1G044460.2 , HORVU2Hr1G044460.3 , HORVU2Hr1G044450.8 , HORVU2Hr1G044450.7 , HORVU2Hr1G044450.6 , HORVU2Hr1G044450.5 , HORVU2Hr1G044450.4 , HORVU2Hr1G044450.3 , HORVU2Hr1G044450.2 , HORVU2Hr1G044450.1 , HORVU6Hr1G079630.8 , HORVU6Hr1G079630.7 , HORVU6Hr1G079630.6 , HORVU6Hr1G079630.5 , HORVU6Hr1G079630.4 , HORVU6Hr1G079630.3 , HORVU6Hr1G079630.2 , HORVU6Hr1G079630.1 , HORVU5Hr1G084900.8 , HORVU5Hr1G084900.9 , HORVU5Hr1G084900.2 , HORVU5Hr1G084900.3 , HORVU5Hr1G084900.6 , HORVU5Hr1G084900.7 , HORVU5Hr1G084900.4 , HORVU5Hr1G084900.5
Wheat TraesCS7A02G346300 , TraesCS7A02G346300 , TraesCS2D02G221800 , TraesCS6D02G305000 , TraesCS6B02G355600 , TraesCS7B02G236800 , TraesCS2A02G216200 , TraesCS2D02G292500 , TraesCS1D02G431200 , TraesCS2D02G292500 , TraesCS6A02G325300 , TraesCS2B02G241200 , TraesCS5A02G338400 , TraesCS5A02G338400 , TraesCS5A02G338400 , TraesCS5A02G338400 , TraesCS2B02G241200 , TraesCS2B02G241200 , TraesCS7D02G332800
Populus -


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cDNA sequences
Sobic.004G313200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
3 Sobic.001G108100 expressed protein -
4 Sobic.001G140600 expressed protein -
5 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
6 Sobic.003G102000 expressed protein -
7 Sobic.010G241100 thaumatin family domain containing protein, expressed -
8 Sobic.006G219500 remorin family protein, putative, expressed -
9 Sobic.007G116800 BURP domain containing protein, expressed -
10 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
11 Sobic.003G373900 universal stress protein domain containing protein, putative, expressed -
12 Sobic.010G269700 expressed protein -
13 Sobic.010G111200 "GASR7(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659934)@GASR7 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
14 Sobic.001G199400 monocopper oxidase, putative, expressed -
15 Sobic.010G014700 expressed protein -
16 Sobic.007G180200 NC domain-containing protein, putative, expressed -
17 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
18 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
19 Sobic.007G000500 HMG1/2, putative, expressed -
20 Sobic.002G227900 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic004G313200 Sobic004G313200 Sobic001G083500 Sobic001G083500 Sobic004G313200--Sobic001G083500 Sobic002G222500 Sobic002G222500 Sobic004G313200--Sobic002G222500 Sobic001G108100 Sobic001G108100 Sobic004G313200--Sobic001G108100 Sobic001G140600 Sobic001G140600 Sobic004G313200--Sobic001G140600 Sobic009G146700 Sobic009G146700 Sobic004G313200--Sobic009G146700 Sobic003G102000 Sobic003G102000 Sobic004G313200--Sobic003G102000 Sobic010G241100 Sobic010G241100 Sobic004G313200--Sobic010G241100 Sobic006G219500 Sobic006G219500 Sobic004G313200--Sobic006G219500 Sobic007G116800 Sobic007G116800 Sobic004G313200--Sobic007G116800 Sobic001G083500--Sobic004G313200 Sobic002G335900 Sobic002G335900 Sobic001G083500--Sobic002G335900 Sobic009G088700 Sobic009G088700 Sobic001G083500--Sobic009G088700 Sobic002G337600 Sobic002G337600 Sobic001G083500--Sobic002G337600 Sobic001G074000 Sobic001G074000 Sobic001G083500--Sobic001G074000 Sobic002G160800 Sobic002G160800 Sobic001G083500--Sobic002G160800 Sobic001G452900 Sobic001G452900 Sobic001G083500--Sobic001G452900 Sobic003G100700 Sobic003G100700 Sobic001G083500--Sobic003G100700 Sobic001G199400 Sobic001G199400 Sobic001G083500--Sobic001G199400 Sobic001G091500 Sobic001G091500 Sobic002G222500--Sobic001G091500 Sobic008G114900 Sobic008G114900 Sobic002G222500--Sobic008G114900 Sobic010G269700 Sobic010G269700 Sobic002G222500--Sobic010G269700 Sobic003G387700 Sobic003G387700 Sobic002G222500--Sobic003G387700 Sobic002G222500--Sobic010G241100 Sobic003G444100 Sobic003G444100 Sobic002G222500--Sobic003G444100 Sobic002G222500--Sobic004G313200 Sobic002G222500--Sobic006G219500 Sobic003G032200 Sobic003G032200 Sobic002G222500--Sobic003G032200 Sobic004G215400 Sobic004G215400 Sobic001G108100--Sobic004G215400 Sobic006G185600 Sobic006G185600 Sobic001G108100--Sobic006G185600 Sobic006G068200 Sobic006G068200 Sobic001G108100--Sobic006G068200 Sobic001G108100--Sobic004G313200 Sobic010G087600 Sobic010G087600 Sobic001G108100--Sobic010G087600 Sobic010G087700 Sobic010G087700 Sobic001G108100--Sobic010G087700 Sobic005G118700 Sobic005G118700 Sobic001G108100--Sobic005G118700 Sobic005G180000 Sobic005G180000 Sobic001G108100--Sobic005G180000 Sobic005G179800 Sobic005G179800 Sobic001G108100--Sobic005G179800 Sobic002G313000 Sobic002G313000 Sobic001G140600--Sobic002G313000 Sobic008G006800 Sobic008G006800 Sobic001G140600--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic001G140600--Sobic001G177900 Sobic001G540900 Sobic001G540900 Sobic001G140600--Sobic001G540900 Sobic003G260700 Sobic003G260700 Sobic001G140600--Sobic003G260700 Sobic004G271300 Sobic004G271300 Sobic001G140600--Sobic004G271300 Sobic010G215300 Sobic010G215300 Sobic001G140600--Sobic010G215300 Sobic001G140600--Sobic003G102000 Sobic004G339500 Sobic004G339500 Sobic001G140600--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic009G146700--Sobic005G199700 Sobic003G338700 Sobic003G338700 Sobic009G146700--Sobic003G338700 Sobic002G363300 Sobic002G363300 Sobic009G146700--Sobic002G363300 Sobic010G014700 Sobic010G014700 Sobic009G146700--Sobic010G014700 Sobic003G010700 Sobic003G010700 Sobic009G146700--Sobic003G010700 Sobic001G286700 Sobic001G286700 Sobic009G146700--Sobic001G286700 Sobic007G180200 Sobic007G180200 Sobic009G146700--Sobic007G180200 Sobic006G107500 Sobic006G107500 Sobic009G146700--Sobic006G107500 Sobic010G014500 Sobic010G014500 Sobic009G146700--Sobic010G014500 Sobic008G125700 Sobic008G125700 Sobic003G102000--Sobic008G125700 Sobic003G102000--Sobic003G260700 Sobic010G119300 Sobic010G119300 Sobic003G102000--Sobic010G119300 Sobic003G102000--Sobic004G339500 Sobic003G102000--Sobic008G114900 Sobic004G257600 Sobic004G257600 Sobic003G102000--Sobic004G257600 Sobic004G198100 Sobic004G198100 Sobic003G102000--Sobic004G198100 Sobic003G102000--Sobic008G006800 Sobic003G102000--Sobic002G313000 Sobic010G192500 Sobic010G192500 Sobic010G241100--Sobic010G192500 Sobic010G086000 Sobic010G086000 Sobic010G241100--Sobic010G086000 Sobic010G241100--Sobic003G032200 Sobic010G241100--Sobic002G337600 Sobic002G394500 Sobic002G394500 Sobic010G241100--Sobic002G394500 Sobic010G241100--Sobic002G222500 Sobic010G023400 Sobic010G023400 Sobic010G241100--Sobic010G023400 Sobic010G241100--Sobic001G452900 Sobic007G160300 Sobic007G160300 Sobic010G241100--Sobic007G160300 Sobic006G219500--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic006G219500--Sobic001G155700 Sobic001G493900 Sobic001G493900 Sobic006G219500--Sobic001G493900 Sobic010G129700 Sobic010G129700 Sobic006G219500--Sobic010G129700 Sobic006G219500--Sobic009G146700 Sobic006G219500--Sobic002G313000 Sobic002G319300 Sobic002G319300 Sobic006G219500--Sobic002G319300 Sobic006G219500--Sobic008G125700 Sobic001G496400 Sobic001G496400 Sobic006G219500--Sobic001G496400 Sobic007G087800 Sobic007G087800 Sobic007G116800--Sobic007G087800 Sobic007G116800--Sobic010G129700 Sobic001G522300 Sobic001G522300 Sobic007G116800--Sobic001G522300 Sobic007G116800--Sobic003G260700 Sobic007G116800--Sobic002G313000 Sobic010G092400 Sobic010G092400 Sobic007G116800--Sobic010G092400 Sobic007G116800--Sobic008G114900 Sobic009G184200 Sobic009G184200 Sobic007G116800--Sobic009G184200 Sobic007G116800--Sobic004G257600
Octagon: transcription factors


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