Gene annotation
Transcriptome id Sobic.002G227900.1
Synonym
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt A0A1B6QD03
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF165
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os09g28690.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a047289 , Zm00025a016606 , Zm00025a005431 , Zm00025a014087
Brachypodium KQJ98619 , KQK14954 , KQJ90535 , KQJ98621
Barley HORVU3Hr1G022640.3 , HORVU3Hr1G022640.2 , HORVU3Hr1G022640.1 , HORVU5Hr1G069040.1
Wheat TraesCS5B02G240600 , TraesCS5A02G241900 , TraesCS3A02G122000
Populus -


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cDNA sequences
Sobic.002G227900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G230000 serine/threonine-protein kinase, putative, expressed -
2 Sobic.002G394500 proline-rich family protein, putative, expressed -
3 Sobic.001G473500 domain of unknown function DUF966 domain containing protein, expressed -
4 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.001G393200 expressed protein -
6 Sobic.007G180200 NC domain-containing protein, putative, expressed -
7 Sobic.006G219500 remorin family protein, putative, expressed -
8 Sobic.001G155700 expansin precursor, putative, expressed -
9 Sobic.003G307200 expressed protein -
10 Sobic.002G363300 - -
11 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
12 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
13 Sobic.001G488900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
14 Sobic.003G102000 expressed protein -
15 Sobic.003G084100 expressed protein -
16 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
17 Sobic.003G300400 expressed protein -
18 Sobic.004G211700 - -
19 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
20 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic002G227900 Sobic002G227900 Sobic003G230000 Sobic003G230000 Sobic002G227900--Sobic003G230000 Sobic002G394500 Sobic002G394500 Sobic002G227900--Sobic002G394500 Sobic001G473500 Sobic001G473500 Sobic002G227900--Sobic001G473500 Sobic004G313200 Sobic004G313200 Sobic002G227900--Sobic004G313200 Sobic001G393200 Sobic001G393200 Sobic002G227900--Sobic001G393200 Sobic007G180200 Sobic007G180200 Sobic002G227900--Sobic007G180200 Sobic006G219500 Sobic006G219500 Sobic002G227900--Sobic006G219500 Sobic001G155700 Sobic001G155700 Sobic002G227900--Sobic001G155700 Sobic003G307200 Sobic003G307200 Sobic002G227900--Sobic003G307200 Sobic003G230000--Sobic002G227900 Sobic003G230000--Sobic003G307200 Sobic001G493900 Sobic001G493900 Sobic003G230000--Sobic001G493900 Sobic004G267600 Sobic004G267600 Sobic003G230000--Sobic004G267600 Sobic003G230000--Sobic002G394500 Sobic002G360500 Sobic002G360500 Sobic003G230000--Sobic002G360500 Sobic001G199400 Sobic001G199400 Sobic003G230000--Sobic001G199400 Sobic003G230000--Sobic006G219500 Sobic001G231200 Sobic001G231200 Sobic003G230000--Sobic001G231200 Sobic002G394500--Sobic001G155700 Sobic002G394500--Sobic006G219500 Sobic010G241100 Sobic010G241100 Sobic002G394500--Sobic010G241100 Sobic006G105600 Sobic006G105600 Sobic002G394500--Sobic006G105600 Sobic002G319300 Sobic002G319300 Sobic002G394500--Sobic002G319300 Sobic010G192500 Sobic010G192500 Sobic002G394500--Sobic010G192500 Sobic003G260700 Sobic003G260700 Sobic002G394500--Sobic003G260700 Sobic008G114900 Sobic008G114900 Sobic002G394500--Sobic008G114900 Sobic002G313000 Sobic002G313000 Sobic002G394500--Sobic002G313000 Sobic001G286700 Sobic001G286700 Sobic001G473500--Sobic001G286700 Sobic004G211700 Sobic004G211700 Sobic001G473500--Sobic004G211700 Sobic002G363300 Sobic002G363300 Sobic001G473500--Sobic002G363300 Sobic010G235300 Sobic010G235300 Sobic001G473500--Sobic010G235300 Sobic001G046400 Sobic001G046400 Sobic001G473500--Sobic001G046400 Sobic009G208300 Sobic009G208300 Sobic001G473500--Sobic009G208300 Sobic001G473500--Sobic010G192500 Sobic009G060800 Sobic009G060800 Sobic001G473500--Sobic009G060800 Sobic009G146700 Sobic009G146700 Sobic001G473500--Sobic009G146700 Sobic001G083500 Sobic001G083500 Sobic004G313200--Sobic001G083500 Sobic002G222500 Sobic002G222500 Sobic004G313200--Sobic002G222500 Sobic001G108100 Sobic001G108100 Sobic004G313200--Sobic001G108100 Sobic001G140600 Sobic001G140600 Sobic004G313200--Sobic001G140600 Sobic004G313200--Sobic009G146700 Sobic003G102000 Sobic003G102000 Sobic004G313200--Sobic003G102000 Sobic004G313200--Sobic010G241100 Sobic004G313200--Sobic006G219500 Sobic007G116800 Sobic007G116800 Sobic004G313200--Sobic007G116800 Sobic010G168700 Sobic010G168700 Sobic001G393200--Sobic010G168700 Sobic009G047500 Sobic009G047500 Sobic001G393200--Sobic009G047500 Sobic005G168400 Sobic005G168400 Sobic001G393200--Sobic005G168400 Sobic008G125700 Sobic008G125700 Sobic001G393200--Sobic008G125700 Sobic001G393200--Sobic002G360500 Sobic001G347201 Sobic001G347201 Sobic001G393200--Sobic001G347201 Sobic005G199700 Sobic005G199700 Sobic001G393200--Sobic005G199700 Sobic010G119300 Sobic010G119300 Sobic001G393200--Sobic010G119300 Sobic001G393200--Sobic007G180200 Sobic007G180200--Sobic005G199700 Sobic007G165800 Sobic007G165800 Sobic007G180200--Sobic007G165800 Sobic001G299600 Sobic001G299600 Sobic007G180200--Sobic001G299600 Sobic003G338700 Sobic003G338700 Sobic007G180200--Sobic003G338700 Sobic003G027100 Sobic003G027100 Sobic007G180200--Sobic003G027100 Sobic007G180200--Sobic009G146700 Sobic007G180200--Sobic001G199400 Sobic010G014700 Sobic010G014700 Sobic007G180200--Sobic010G014700 Sobic007G180200--Sobic010G235300 Sobic006G219500--Sobic008G114900 Sobic006G219500--Sobic001G155700 Sobic006G219500--Sobic001G493900 Sobic010G129700 Sobic010G129700 Sobic006G219500--Sobic010G129700 Sobic006G219500--Sobic009G146700 Sobic006G219500--Sobic002G313000 Sobic006G219500--Sobic002G319300 Sobic006G219500--Sobic008G125700 Sobic001G496400 Sobic001G496400 Sobic006G219500--Sobic001G496400 Sobic001G155700--Sobic002G319300 Sobic001G155700--Sobic008G114900 Sobic001G155700--Sobic001G493900 Sobic001G155700--Sobic010G192500 Sobic001G155700--Sobic006G219500 Sobic001G155700--Sobic002G313000 Sobic003G089300 Sobic003G089300 Sobic001G155700--Sobic003G089300 Sobic001G155700--Sobic002G394500 Sobic007G160300 Sobic007G160300 Sobic001G155700--Sobic007G160300 Sobic003G307200--Sobic002G319300 Sobic003G307200--Sobic002G360500 Sobic003G307200--Sobic001G493900 Sobic002G417000 Sobic002G417000 Sobic003G307200--Sobic002G417000 Sobic003G307200--Sobic001G155700 Sobic006G221800 Sobic006G221800 Sobic003G307200--Sobic006G221800 Sobic002G074000 Sobic002G074000 Sobic003G307200--Sobic002G074000 Sobic001G518000 Sobic001G518000 Sobic003G307200--Sobic001G518000 Sobic001G379900 Sobic001G379900 Sobic003G307200--Sobic001G379900
Octagon: transcription factors


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