Gene annotation
Transcriptome id Sobic.003G102000.1
Synonym Sb03g008530
Functional annotation expressed protein
UniProt C5XEY7
Pfam PF06075
Panther DB PTHR31928 PTHR31928:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70340 : Plant protein of unknown function (DUF936)
RAP-DB (Rice) LOC_Os01g01890.1 : expressed protein
MaizeGDB (Corn) Zm00025a023786 , Zm00025a029194 , Zm00025a014982
Brachypodium KQK02313
Barley HORVU3Hr1G000140.12 , HORVU3Hr1G000140.10 , HORVU3Hr1G000140.11 , HORVU3Hr1G000140.8 , HORVU3Hr1G000140.9 , HORVU3Hr1G000140.1 , HORVU3Hr1G000140.2 , HORVU3Hr1G000140.3 , HORVU3Hr1G000140.4 , HORVU3Hr1G000140.5 , HORVU3Hr1G000140.6 , HORVU3Hr1G000140.7
Wheat TraesCS3A02G000300 , TraesCS3D02G008800 , TraesCS3B02G003800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
2 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
3 Sobic.010G119300 expressed protein -
4 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
5 Sobic.008G114900 rhoGAP domain containing protein, expressed -
6 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
7 Sobic.004G198100 expressed protein -
8 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
9 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
10 Sobic.001G398400 expressed protein -
11 Sobic.001G140600 expressed protein -
12 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
13 Sobic.001G091500 expressed protein -
14 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
15 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
16 Sobic.003G387700 expressed protein -
17 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
18 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
19 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
20 Sobic.007G116800 BURP domain containing protein, expressed -


Gene co-expression network
sample Sobic003G102000 Sobic003G102000 Sobic008G125700 Sobic008G125700 Sobic003G102000--Sobic008G125700 Sobic003G260700 Sobic003G260700 Sobic003G102000--Sobic003G260700 Sobic010G119300 Sobic010G119300 Sobic003G102000--Sobic010G119300 Sobic004G339500 Sobic004G339500 Sobic003G102000--Sobic004G339500 Sobic008G114900 Sobic008G114900 Sobic003G102000--Sobic008G114900 Sobic004G257600 Sobic004G257600 Sobic003G102000--Sobic004G257600 Sobic004G198100 Sobic004G198100 Sobic003G102000--Sobic004G198100 Sobic008G006800 Sobic008G006800 Sobic003G102000--Sobic008G006800 Sobic002G313000 Sobic002G313000 Sobic003G102000--Sobic002G313000 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic008G125700--Sobic004G198100 Sobic008G125700--Sobic008G006800 Sobic008G125700--Sobic002G313000 Sobic008G125700--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic008G125700--Sobic005G199700 Sobic001G170800 Sobic001G170800 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic001G398400 Sobic001G398400 Sobic003G260700--Sobic001G398400 Sobic003G260700--Sobic004G198100 Sobic004G271300 Sobic004G271300 Sobic003G260700--Sobic004G271300 Sobic003G260700--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic010G119300--Sobic008G125700 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic010G119300--Sobic003G102000 Sobic005G005700 Sobic005G005700 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic010G119300--Sobic008G114900 Sobic010G119300--Sobic001G398400 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic004G339500--Sobic001G177900 Sobic004G339500--Sobic010G119300 Sobic004G339500--Sobic003G102000 Sobic004G339500--Sobic004G198100 Sobic004G339500--Sobic008G125700 Sobic004G339500--Sobic005G005700 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic001G155700 Sobic001G155700 Sobic008G114900--Sobic001G155700 Sobic008G114900--Sobic010G119300 Sobic006G219500 Sobic006G219500 Sobic008G114900--Sobic006G219500 Sobic002G319300 Sobic002G319300 Sobic008G114900--Sobic002G319300 Sobic008G114900--Sobic003G260700 Sobic001G493900 Sobic001G493900 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic004G257600--Sobic003G260700 Sobic003G387700 Sobic003G387700 Sobic004G257600--Sobic003G387700 Sobic004G257600--Sobic001G398400 Sobic004G257600--Sobic001G177900 Sobic004G257600--Sobic004G198100 Sobic004G257600--Sobic001G170800 Sobic003G444100 Sobic003G444100 Sobic004G257600--Sobic003G444100 Sobic007G168900 Sobic007G168900 Sobic004G257600--Sobic007G168900 Sobic004G257600--Sobic004G339500 Sobic004G198100--Sobic003G260700 Sobic004G198100--Sobic010G119300 Sobic004G198100--Sobic001G398400 Sobic004G198100--Sobic008G125700 Sobic004G198100--Sobic004G257600 Sobic004G198100--Sobic001G170800 Sobic004G198100--Sobic004G339500 Sobic004G198100--Sobic002G313000 Sobic004G198100--Sobic004G271300 Sobic008G006800--Sobic005G005700 Sobic008G006800--Sobic010G119300 Sobic008G006800--Sobic003G260700 Sobic008G006800--Sobic001G398400 Sobic008G006800--Sobic004G339500 Sobic010G017400 Sobic010G017400 Sobic008G006800--Sobic010G017400 Sobic008G006800--Sobic004G271300 Sobic008G006800--Sobic002G313000 Sobic002G296000 Sobic002G296000 Sobic008G006800--Sobic002G296000 Sobic010G129700 Sobic010G129700 Sobic002G313000--Sobic010G129700 Sobic002G313000--Sobic003G260700 Sobic002G313000--Sobic008G114900 Sobic002G313000--Sobic008G006800 Sobic002G313000--Sobic008G125700 Sobic001G140600 Sobic001G140600 Sobic002G313000--Sobic001G140600 Sobic002G313000--Sobic002G319300 Sobic002G313000--Sobic001G170800 Sobic002G313000--Sobic001G398400
Octagon: transcription factors


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