Gene annotation
Transcriptome id Sobic.003G387700.1
Synonym Sb03g042590
Functional annotation expressed protein
UniProt C5XEU0
Pfam -
Panther DB PTHR34124 PTHR34124:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G36800 : -
RAP-DB (Rice) LOC_Os01g67110.1 : expressed protein
MaizeGDB (Corn) Zm00025a039453 , Zm00025a026448
Brachypodium KQK11009
Barley HORVU3Hr1G089620.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G387700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
2 Sobic.006G134200 expressed protein -
3 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
4 Sobic.001G091500 expressed protein -
5 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
6 Sobic.010G119300 expressed protein -
7 Sobic.001G398400 expressed protein -
8 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
9 Sobic.007G100600 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
11 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
12 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
13 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
14 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
15 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
16 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
17 Sobic.007G017700 IQ calmodulin-binding motif domain containing protein, expressed -
18 Sobic.004G198100 expressed protein -
19 Sobic.006G124400 ATP binding protein, putative, expressed -
20 Sobic.003G102000 expressed protein -


Gene co-expression network
sample Sobic003G387700 Sobic003G387700 Sobic004G257600 Sobic004G257600 Sobic003G387700--Sobic004G257600 Sobic006G134200 Sobic006G134200 Sobic003G387700--Sobic006G134200 Sobic010G105400 Sobic010G105400 Sobic003G387700--Sobic010G105400 Sobic001G091500 Sobic001G091500 Sobic003G387700--Sobic001G091500 Sobic001G105800 Sobic001G105800 Sobic003G387700--Sobic001G105800 Sobic010G119300 Sobic010G119300 Sobic003G387700--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic003G387700--Sobic001G398400 Sobic003G328500 Sobic003G328500 Sobic003G387700--Sobic003G328500 Sobic007G100600 Sobic007G100600 Sobic003G387700--Sobic007G100600 Sobic003G260700 Sobic003G260700 Sobic004G257600--Sobic003G260700 Sobic004G257600--Sobic003G387700 Sobic004G257600--Sobic001G398400 Sobic001G177900 Sobic001G177900 Sobic004G257600--Sobic001G177900 Sobic004G198100 Sobic004G198100 Sobic004G257600--Sobic004G198100 Sobic001G170800 Sobic001G170800 Sobic004G257600--Sobic001G170800 Sobic003G444100 Sobic003G444100 Sobic004G257600--Sobic003G444100 Sobic007G168900 Sobic007G168900 Sobic004G257600--Sobic007G168900 Sobic004G339500 Sobic004G339500 Sobic004G257600--Sobic004G339500 Sobic006G134200--Sobic003G328500 Sobic006G134200--Sobic003G387700 Sobic007G207700 Sobic007G207700 Sobic006G134200--Sobic007G207700 Sobic006G134200--Sobic004G257600 Sobic006G134200--Sobic007G100600 Sobic001G075400 Sobic001G075400 Sobic006G134200--Sobic001G075400 Sobic006G134200--Sobic001G177900 Sobic006G134200--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic006G134200--Sobic005G144600 Sobic010G105400--Sobic005G144600 Sobic004G047100 Sobic004G047100 Sobic010G105400--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic010G105400--Sobic009G184200 Sobic005G000500 Sobic005G000500 Sobic010G105400--Sobic005G000500 Sobic010G105400--Sobic001G398400 Sobic003G179500 Sobic003G179500 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic010G105400--Sobic007G168900 Sobic002G204400 Sobic002G204400 Sobic010G105400--Sobic002G204400 Sobic002G426800 Sobic002G426800 Sobic001G091500--Sobic002G426800 Sobic001G091500--Sobic003G387700 Sobic009G120700 Sobic009G120700 Sobic001G091500--Sobic009G120700 Sobic001G091500--Sobic003G260700 Sobic001G091500--Sobic004G047100 Sobic002G222500 Sobic002G222500 Sobic001G091500--Sobic002G222500 Sobic001G091500--Sobic004G339500 Sobic001G091500--Sobic010G119300 Sobic001G091500--Sobic004G198100 Sobic007G007800 Sobic007G007800 Sobic001G105800--Sobic007G007800 Sobic002G223900 Sobic002G223900 Sobic001G105800--Sobic002G223900 Sobic001G105800--Sobic009G184200 Sobic003G444300 Sobic003G444300 Sobic001G105800--Sobic003G444300 Sobic001G105800--Sobic003G387700 Sobic001G083300 Sobic001G083300 Sobic001G105800--Sobic001G083300 Sobic001G456500 Sobic001G456500 Sobic001G105800--Sobic001G456500 Sobic001G105800--Sobic010G105400 Sobic009G172950 Sobic009G172950 Sobic001G105800--Sobic009G172950 Sobic008G125700 Sobic008G125700 Sobic010G119300--Sobic008G125700 Sobic008G006800 Sobic008G006800 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic003G102000 Sobic003G102000 Sobic010G119300--Sobic003G102000 Sobic005G005700 Sobic005G005700 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic008G114900 Sobic008G114900 Sobic010G119300--Sobic008G114900 Sobic010G119300--Sobic001G398400 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic001G398400--Sobic008G006800 Sobic001G398400--Sobic009G184200 Sobic004G271300 Sobic004G271300 Sobic001G398400--Sobic004G271300 Sobic001G398400--Sobic005G005700 Sobic001G398400--Sobic010G105400 Sobic001G398400--Sobic004G198100 Sobic001G398400--Sobic004G257600 Sobic003G328500--Sobic006G134200 Sobic003G328500--Sobic001G177900 Sobic003G328500--Sobic001G075400 Sobic003G328500--Sobic007G207700 Sobic003G328500--Sobic003G387700 Sobic003G328500--Sobic004G257600 Sobic003G328500--Sobic003G260700 Sobic003G328500--Sobic005G144600 Sobic003G328500--Sobic002G426800 Sobic001G070300 Sobic001G070300 Sobic007G100600--Sobic001G070300 Sobic007G100600--Sobic004G257600 Sobic007G100600--Sobic003G387700 Sobic007G100600--Sobic003G328500 Sobic001G142000 Sobic001G142000 Sobic007G100600--Sobic001G142000 Sobic010G003100 Sobic010G003100 Sobic007G100600--Sobic010G003100 Sobic007G100600--Sobic006G134200 Sobic002G255500 Sobic002G255500 Sobic007G100600--Sobic002G255500 Sobic010G274000 Sobic010G274000 Sobic007G100600--Sobic010G274000
Octagon: transcription factors


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