Gene annotation
Transcriptome id Sobic.007G017700.1
Synonym Sb07g001510, iqd17
Functional annotation IQ calmodulin-binding motif domain containing protein, expressed
UniProt C5YM18
Pfam PF00612 PF13178
Panther DB PTHR32295 PTHR32295:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G01110 : IQ-domain 18
RAP-DB (Rice) LOC_Os08g02250.1 : IQ calmodulin-binding motif domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030259 , Zm00025a037523
Brachypodium KQJ94865 , KQJ94866 , KQK03147
Barley HORVU3Hr1G019240.1 , HORVU3Hr1G019240.2 , HORVU7Hr1G075720.4 , HORVU7Hr1G075720.5 , HORVU7Hr1G075720.6 , HORVU7Hr1G075720.7 , HORVU7Hr1G075720.1 , HORVU7Hr1G075720.2 , HORVU7Hr1G075720.3
Wheat TraesCS3A02G105600 , TraesCS7A02G317400 , TraesCS7A02G317400 , TraesCS7A02G317400 , TraesCS1A02G122900 , TraesCS7B02G218800 , TraesCS7B02G218800 , TraesCS7B02G218800 , TraesCS4B02G277100 , TraesCS4B02G277100 , TraesCSU02G104800 , TraesCSU02G104800 , TraesCSU02G104800 , TraesCS3B02G124000 , TraesCS3B02G124000 , TraesCS3D02G107700 , TraesCS1A02G122900 , TraesCS4D02G275700 , TraesCS4D02G275700 , TraesCS4D02G275700 , TraesCS1D02G123800 , TraesCS1D02G123800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G387700 expressed protein -
2 Sobic.002G289800 HMG1/2, putative, expressed -
3 Sobic.007G207700 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
4 Sobic.010G202100 expressed protein -
5 Sobic.006G134200 expressed protein -
6 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
7 Sobic.001G091500 expressed protein -
8 Sobic.010G234800 expressed protein -
9 Sobic.008G114500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
10 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
11 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
12 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
13 Sobic.003G316601 - -
14 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
15 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
16 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
17 Sobic.005G140001 - K08235: xyloglucan:xyloglucosyl transferase
18 Sobic.001G230300 shugoshin-1, putative, expressed -
19 Sobic.009G120700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
20 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic007G017700 Sobic007G017700 Sobic003G387700 Sobic003G387700 Sobic007G017700--Sobic003G387700 Sobic002G289800 Sobic002G289800 Sobic007G017700--Sobic002G289800 Sobic007G207700 Sobic007G207700 Sobic007G017700--Sobic007G207700 Sobic010G202100 Sobic010G202100 Sobic007G017700--Sobic010G202100 Sobic006G134200 Sobic006G134200 Sobic007G017700--Sobic006G134200 Sobic010G215300 Sobic010G215300 Sobic007G017700--Sobic010G215300 Sobic001G091500 Sobic001G091500 Sobic007G017700--Sobic001G091500 Sobic010G234800 Sobic010G234800 Sobic007G017700--Sobic010G234800 Sobic008G114500 Sobic008G114500 Sobic007G017700--Sobic008G114500 Sobic004G257600 Sobic004G257600 Sobic003G387700--Sobic004G257600 Sobic003G387700--Sobic006G134200 Sobic010G105400 Sobic010G105400 Sobic003G387700--Sobic010G105400 Sobic003G387700--Sobic001G091500 Sobic001G105800 Sobic001G105800 Sobic003G387700--Sobic001G105800 Sobic010G119300 Sobic010G119300 Sobic003G387700--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic003G387700--Sobic001G398400 Sobic003G328500 Sobic003G328500 Sobic003G387700--Sobic003G328500 Sobic007G100600 Sobic007G100600 Sobic003G387700--Sobic007G100600 Sobic001G289900 Sobic001G289900 Sobic002G289800--Sobic001G289900 Sobic002G289800--Sobic007G017700 Sobic003G316601 Sobic003G316601 Sobic002G289800--Sobic003G316601 Sobic004G237000 Sobic004G237000 Sobic002G289800--Sobic004G237000 Sobic004G327600 Sobic004G327600 Sobic002G289800--Sobic004G327600 Sobic007G132900 Sobic007G132900 Sobic002G289800--Sobic007G132900 Sobic010G222100 Sobic010G222100 Sobic002G289800--Sobic010G222100 Sobic001G300400 Sobic001G300400 Sobic002G289800--Sobic001G300400 Sobic006G081800 Sobic006G081800 Sobic002G289800--Sobic006G081800 Sobic007G207700--Sobic003G328500 Sobic007G207700--Sobic006G134200 Sobic005G016300 Sobic005G016300 Sobic007G207700--Sobic005G016300 Sobic007G207700--Sobic007G017700 Sobic001G075400 Sobic001G075400 Sobic007G207700--Sobic001G075400 Sobic006G179200 Sobic006G179200 Sobic007G207700--Sobic006G179200 Sobic007G207700--Sobic001G091500 Sobic005G210600 Sobic005G210600 Sobic007G207700--Sobic005G210600 Sobic002G313000 Sobic002G313000 Sobic007G207700--Sobic002G313000 Sobic010G202100--Sobic010G215300 Sobic010G202100--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic010G202100--Sobic001G098900 Sobic010G202100--Sobic007G017700 Sobic003G414400 Sobic003G414400 Sobic010G202100--Sobic003G414400 Sobic009G025400 Sobic009G025400 Sobic010G202100--Sobic009G025400 Sobic003G047200 Sobic003G047200 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic010G202100--Sobic008G114500 Sobic006G134200--Sobic003G328500 Sobic006G134200--Sobic003G387700 Sobic006G134200--Sobic007G207700 Sobic006G134200--Sobic004G257600 Sobic006G134200--Sobic007G100600 Sobic006G134200--Sobic001G075400 Sobic001G177900 Sobic001G177900 Sobic006G134200--Sobic001G177900 Sobic006G134200--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic006G134200--Sobic005G144600 Sobic010G215300--Sobic001G098900 Sobic010G215300--Sobic010G234800 Sobic010G215300--Sobic003G414400 Sobic010G215300--Sobic010G202100 Sobic001G140600 Sobic001G140600 Sobic010G215300--Sobic001G140600 Sobic010G215300--Sobic003G047200 Sobic010G215300--Sobic008G114500 Sobic001G540900 Sobic001G540900 Sobic010G215300--Sobic001G540900 Sobic001G284900 Sobic001G284900 Sobic010G215300--Sobic001G284900 Sobic002G426800 Sobic002G426800 Sobic001G091500--Sobic002G426800 Sobic001G091500--Sobic003G387700 Sobic009G120700 Sobic009G120700 Sobic001G091500--Sobic009G120700 Sobic003G260700 Sobic003G260700 Sobic001G091500--Sobic003G260700 Sobic004G047100 Sobic004G047100 Sobic001G091500--Sobic004G047100 Sobic002G222500 Sobic002G222500 Sobic001G091500--Sobic002G222500 Sobic004G339500 Sobic004G339500 Sobic001G091500--Sobic004G339500 Sobic001G091500--Sobic010G119300 Sobic004G198100 Sobic004G198100 Sobic001G091500--Sobic004G198100 Sobic010G234800--Sobic001G098900 Sobic010G234800--Sobic010G215300 Sobic010G234800--Sobic010G202100 Sobic010G234800--Sobic003G047200 Sobic010G234800--Sobic008G114500 Sobic002G293800 Sobic002G293800 Sobic010G234800--Sobic002G293800 Sobic010G234800--Sobic007G017700 Sobic010G234800--Sobic003G414400 Sobic010G234800--Sobic001G140600 Sobic008G114500--Sobic010G234800 Sobic008G114500--Sobic010G215300 Sobic004G205300 Sobic004G205300 Sobic008G114500--Sobic004G205300 Sobic008G114500--Sobic007G017700 Sobic008G114500--Sobic001G098900 Sobic008G114500--Sobic010G202100 Sobic008G114500--Sobic002G293800 Sobic008G114500--Sobic003G414400 Sobic004G279601 Sobic004G279601 Sobic008G114500--Sobic004G279601
Octagon: transcription factors


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