Gene annotation
Transcriptome id Sobic.005G140001.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIM2
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF15
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G13870 : xyloglucan endotransglucosylase/hydrolase 5
RAP-DB (Rice) LOC_Os11g33270.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a018309 , Zm00025a019784 , Zm00025a033566 , Zm00025a018310 , Zm00025a050765 , Zm00025a054957 , Zm00025a036323
Brachypodium KQK17338 , KQJ94401 , KQJ94399 , KQJ84411 , KQJ84413 , KQJ84414 , KQJ97550 , KQK17340 , KQK17341 , KQJ88316
Barley HORVU0Hr1G022110.1 , HORVU2Hr1G014530.1 , HORVU2Hr1G014530.3 , HORVU2Hr1G014530.2 , HORVU4Hr1G028720.1 , HORVU7Hr1G081740.1 , HORVU7Hr1G098330.6 , HORVU7Hr1G098330.4 , HORVU7Hr1G098330.5 , HORVU7Hr1G098330.2 , HORVU7Hr1G098330.1 , HORVU7Hr1G098280.2 , HORVU7Hr1G098280.3 , HORVU7Hr1G098280.1 , HORVU7Hr1G098440.1 , HORVU7Hr1G098440.2 , HORVU7Hr1G098440.3 , HORVU7Hr1G098440.4 , HORVU7Hr1G098440.5 , HORVU7Hr1G098440.6 , HORVU2Hr1G101160.3 , HORVU2Hr1G101160.2 , HORVU2Hr1G101160.1 , HORVU2Hr1G101160.4 , HORVU7Hr1G098370.2 , HORVU7Hr1G098370.3 , HORVU7Hr1G098370.1 , HORVU7Hr1G098370.4 , HORVU7Hr1G098320.2 , HORVU7Hr1G098320.3 , HORVU7Hr1G098260.1 , HORVU7Hr1G098260.2 , HORVU7Hr1G098260.3 , HORVU2Hr1G101150.2 , HORVU2Hr1G101150.3 , HORVU2Hr1G101150.1 , HORVU2Hr1G101150.4
Wheat TraesCS2B02G454600 , TraesCS2B02G454600 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS7B02G326900 , TraesCS7B02G327200 , TraesCS2A02G089000 , TraesCS7B02G327400 , TraesCSU02G175000 , TraesCS7B02G327700 , TraesCS7D02G339400 , TraesCS2D02G086800 , TraesCS7B02G327000 , TraesCS7A02G426900 , TraesCS2D02G431600 , TraesCS2A02G433500 , TraesCS2B02G454500 , TraesCS7B02G242900 , TraesCS7A02G427600 , TraesCS7A02G426100 , TraesCS7D02G418700 , TraesCS2B02G104700 , TraesCS7A02G427100 , TraesCS7D02G419400 , TraesCS4D02G142800 , TraesCS4D02G142800 , TraesCS7A02G426600 , TraesCS7A02G426700 , TraesCS2D02G431500 , TraesCS7A02G427300 , TraesCS2A02G433600 , TraesCS2A02G498500 , TraesCS4A02G172600 , TraesCS7D02G419900 , TraesCS7A02G331200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -
2 Sobic.001G393200 expressed protein -
3 Sobic.007G207700 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
4 Sobic.010G119300 expressed protein -
5 Sobic.007G017700 IQ calmodulin-binding motif domain containing protein, expressed -
6 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
7 Sobic.009G120700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
8 Sobic.001G091500 expressed protein -
9 Sobic.003G316601 - -
10 Sobic.006G129800 ankyrin repeat domain containing protein, expressed -
11 Sobic.003G084100 expressed protein -
12 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
14 Sobic.003G102000 expressed protein -
15 Sobic.003G387700 expressed protein -
16 Sobic.006G065400 expressed protein -
17 Sobic.010G234800 expressed protein -
18 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
19 Sobic.006G138900 expressed protein -
20 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -


Gene co-expression network
sample Sobic005G140001 Sobic005G140001 Sobic001G299600 Sobic001G299600 Sobic005G140001--Sobic001G299600 Sobic001G393200 Sobic001G393200 Sobic005G140001--Sobic001G393200 Sobic007G207700 Sobic007G207700 Sobic005G140001--Sobic007G207700 Sobic010G119300 Sobic010G119300 Sobic005G140001--Sobic010G119300 Sobic007G017700 Sobic007G017700 Sobic005G140001--Sobic007G017700 Sobic008G125700 Sobic008G125700 Sobic005G140001--Sobic008G125700 Sobic009G120700 Sobic009G120700 Sobic005G140001--Sobic009G120700 Sobic001G091500 Sobic001G091500 Sobic005G140001--Sobic001G091500 Sobic003G316601 Sobic003G316601 Sobic005G140001--Sobic003G316601 Sobic007G180200 Sobic007G180200 Sobic001G299600--Sobic007G180200 Sobic010G014500 Sobic010G014500 Sobic001G299600--Sobic010G014500 Sobic001G488900 Sobic001G488900 Sobic001G299600--Sobic001G488900 Sobic003G338700 Sobic003G338700 Sobic001G299600--Sobic003G338700 Sobic005G199700 Sobic005G199700 Sobic001G299600--Sobic005G199700 Sobic001G199400 Sobic001G199400 Sobic001G299600--Sobic001G199400 Sobic001G155700 Sobic001G155700 Sobic001G299600--Sobic001G155700 Sobic007G165800 Sobic007G165800 Sobic001G299600--Sobic007G165800 Sobic001G493900 Sobic001G493900 Sobic001G299600--Sobic001G493900 Sobic010G168700 Sobic010G168700 Sobic001G393200--Sobic010G168700 Sobic009G047500 Sobic009G047500 Sobic001G393200--Sobic009G047500 Sobic005G168400 Sobic005G168400 Sobic001G393200--Sobic005G168400 Sobic001G393200--Sobic008G125700 Sobic002G360500 Sobic002G360500 Sobic001G393200--Sobic002G360500 Sobic001G347201 Sobic001G347201 Sobic001G393200--Sobic001G347201 Sobic001G393200--Sobic005G199700 Sobic001G393200--Sobic010G119300 Sobic001G393200--Sobic007G180200 Sobic003G328500 Sobic003G328500 Sobic007G207700--Sobic003G328500 Sobic006G134200 Sobic006G134200 Sobic007G207700--Sobic006G134200 Sobic005G016300 Sobic005G016300 Sobic007G207700--Sobic005G016300 Sobic007G207700--Sobic007G017700 Sobic001G075400 Sobic001G075400 Sobic007G207700--Sobic001G075400 Sobic006G179200 Sobic006G179200 Sobic007G207700--Sobic006G179200 Sobic007G207700--Sobic001G091500 Sobic005G210600 Sobic005G210600 Sobic007G207700--Sobic005G210600 Sobic002G313000 Sobic002G313000 Sobic007G207700--Sobic002G313000 Sobic010G119300--Sobic008G125700 Sobic008G006800 Sobic008G006800 Sobic010G119300--Sobic008G006800 Sobic003G260700 Sobic003G260700 Sobic010G119300--Sobic003G260700 Sobic004G198100 Sobic004G198100 Sobic010G119300--Sobic004G198100 Sobic003G102000 Sobic003G102000 Sobic010G119300--Sobic003G102000 Sobic005G005700 Sobic005G005700 Sobic010G119300--Sobic005G005700 Sobic004G339500 Sobic004G339500 Sobic010G119300--Sobic004G339500 Sobic008G114900 Sobic008G114900 Sobic010G119300--Sobic008G114900 Sobic001G398400 Sobic001G398400 Sobic010G119300--Sobic001G398400 Sobic003G387700 Sobic003G387700 Sobic007G017700--Sobic003G387700 Sobic002G289800 Sobic002G289800 Sobic007G017700--Sobic002G289800 Sobic007G017700--Sobic007G207700 Sobic010G202100 Sobic010G202100 Sobic007G017700--Sobic010G202100 Sobic007G017700--Sobic006G134200 Sobic010G215300 Sobic010G215300 Sobic007G017700--Sobic010G215300 Sobic007G017700--Sobic001G091500 Sobic010G234800 Sobic010G234800 Sobic007G017700--Sobic010G234800 Sobic008G114500 Sobic008G114500 Sobic007G017700--Sobic008G114500 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic008G125700--Sobic004G198100 Sobic008G125700--Sobic008G006800 Sobic008G125700--Sobic002G313000 Sobic008G125700--Sobic004G339500 Sobic008G125700--Sobic005G199700 Sobic009G120700--Sobic001G091500 Sobic009G120700--Sobic010G119300 Sobic009G120700--Sobic003G102000 Sobic009G120700--Sobic003G328500 Sobic009G120700--Sobic003G387700 Sobic002G426800 Sobic002G426800 Sobic009G120700--Sobic002G426800 Sobic007G100600 Sobic007G100600 Sobic009G120700--Sobic007G100600 Sobic001G230300 Sobic001G230300 Sobic009G120700--Sobic001G230300 Sobic007G132900 Sobic007G132900 Sobic009G120700--Sobic007G132900 Sobic001G091500--Sobic002G426800 Sobic001G091500--Sobic003G387700 Sobic001G091500--Sobic009G120700 Sobic001G091500--Sobic003G260700 Sobic004G047100 Sobic004G047100 Sobic001G091500--Sobic004G047100 Sobic002G222500 Sobic002G222500 Sobic001G091500--Sobic002G222500 Sobic001G091500--Sobic004G339500 Sobic001G091500--Sobic010G119300 Sobic001G091500--Sobic004G198100 Sobic004G237000 Sobic004G237000 Sobic003G316601--Sobic004G237000 Sobic007G147200 Sobic007G147200 Sobic003G316601--Sobic007G147200 Sobic001G106500 Sobic001G106500 Sobic003G316601--Sobic001G106500 Sobic003G085900 Sobic003G085900 Sobic003G316601--Sobic003G085900 Sobic003G046400 Sobic003G046400 Sobic003G316601--Sobic003G046400 Sobic010G070900 Sobic010G070900 Sobic003G316601--Sobic010G070900 Sobic006G107500 Sobic006G107500 Sobic003G316601--Sobic006G107500 Sobic003G092300 Sobic003G092300 Sobic003G316601--Sobic003G092300 Sobic010G255000 Sobic010G255000 Sobic003G316601--Sobic010G255000
Octagon: transcription factors


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