Gene annotation
Transcriptome id Sobic.009G120700.1
Synonym ATN, Sb09g018850, ATTAN
Functional annotation microtubule-binding protein TANGLED1, putative, expressed
UniProt C5YXC4
Pfam -
Panther DB PTHR35728
NCBI CDD -
KEGG Orthology K18636; microtubule-binding protein TANGLED1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05330 : cyclin family
RAP-DB (Rice) LOC_Os02g26140.1 : microtubule-binding protein TANGLED1, putative, expressed
MaizeGDB (Corn) Zm00025a002285 , Zm00025a043512
Brachypodium KQK20556
Barley HORVU1Hr1G072820.4 , HORVU1Hr1G072820.5 , HORVU1Hr1G072820.1 , HORVU1Hr1G072820.2 , HORVU1Hr1G072820.3
Wheat TraesCS1B02G290400 , TraesCS1A02G281200 , TraesCS1D02G280500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G091500 expressed protein -
2 Sobic.010G119300 expressed protein -
3 Sobic.003G102000 expressed protein -
4 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
5 Sobic.003G387700 expressed protein -
6 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.007G100600 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.001G230300 shugoshin-1, putative, expressed -
9 Sobic.007G132900 linker histone H1 and H5 family protein, expressed -
10 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
11 Sobic.006G065400 expressed protein -
12 Sobic.007G017700 IQ calmodulin-binding motif domain containing protein, expressed -
13 Sobic.002G289800 HMG1/2, putative, expressed -
14 Sobic.005G140001 - K08235: xyloglucan:xyloglucosyl transferase
15 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
16 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
17 Sobic.001G289900 AT hook motif domain containing protein, expressed -
18 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
19 Sobic.007G219400 expressed protein -
20 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase


Gene co-expression network
sample Sobic009G120700 Sobic009G120700 Sobic001G091500 Sobic001G091500 Sobic009G120700--Sobic001G091500 Sobic010G119300 Sobic010G119300 Sobic009G120700--Sobic010G119300 Sobic003G102000 Sobic003G102000 Sobic009G120700--Sobic003G102000 Sobic003G328500 Sobic003G328500 Sobic009G120700--Sobic003G328500 Sobic003G387700 Sobic003G387700 Sobic009G120700--Sobic003G387700 Sobic002G426800 Sobic002G426800 Sobic009G120700--Sobic002G426800 Sobic007G100600 Sobic007G100600 Sobic009G120700--Sobic007G100600 Sobic001G230300 Sobic001G230300 Sobic009G120700--Sobic001G230300 Sobic007G132900 Sobic007G132900 Sobic009G120700--Sobic007G132900 Sobic001G091500--Sobic002G426800 Sobic001G091500--Sobic003G387700 Sobic001G091500--Sobic009G120700 Sobic003G260700 Sobic003G260700 Sobic001G091500--Sobic003G260700 Sobic004G047100 Sobic004G047100 Sobic001G091500--Sobic004G047100 Sobic002G222500 Sobic002G222500 Sobic001G091500--Sobic002G222500 Sobic004G339500 Sobic004G339500 Sobic001G091500--Sobic004G339500 Sobic001G091500--Sobic010G119300 Sobic004G198100 Sobic004G198100 Sobic001G091500--Sobic004G198100 Sobic008G125700 Sobic008G125700 Sobic010G119300--Sobic008G125700 Sobic008G006800 Sobic008G006800 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic010G119300--Sobic003G102000 Sobic005G005700 Sobic005G005700 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic008G114900 Sobic008G114900 Sobic010G119300--Sobic008G114900 Sobic001G398400 Sobic001G398400 Sobic010G119300--Sobic001G398400 Sobic003G102000--Sobic008G125700 Sobic003G102000--Sobic003G260700 Sobic003G102000--Sobic010G119300 Sobic003G102000--Sobic004G339500 Sobic003G102000--Sobic008G114900 Sobic004G257600 Sobic004G257600 Sobic003G102000--Sobic004G257600 Sobic003G102000--Sobic004G198100 Sobic003G102000--Sobic008G006800 Sobic002G313000 Sobic002G313000 Sobic003G102000--Sobic002G313000 Sobic006G134200 Sobic006G134200 Sobic003G328500--Sobic006G134200 Sobic001G177900 Sobic001G177900 Sobic003G328500--Sobic001G177900 Sobic001G075400 Sobic001G075400 Sobic003G328500--Sobic001G075400 Sobic007G207700 Sobic007G207700 Sobic003G328500--Sobic007G207700 Sobic003G328500--Sobic003G387700 Sobic003G328500--Sobic004G257600 Sobic003G328500--Sobic003G260700 Sobic005G144600 Sobic005G144600 Sobic003G328500--Sobic005G144600 Sobic003G328500--Sobic002G426800 Sobic003G387700--Sobic004G257600 Sobic003G387700--Sobic006G134200 Sobic010G105400 Sobic010G105400 Sobic003G387700--Sobic010G105400 Sobic003G387700--Sobic001G091500 Sobic001G105800 Sobic001G105800 Sobic003G387700--Sobic001G105800 Sobic003G387700--Sobic010G119300 Sobic003G387700--Sobic001G398400 Sobic003G387700--Sobic003G328500 Sobic003G387700--Sobic007G100600 Sobic009G181500 Sobic009G181500 Sobic002G426800--Sobic009G181500 Sobic002G426800--Sobic001G091500 Sobic002G426800--Sobic005G144600 Sobic002G426800--Sobic004G047100 Sobic002G426800--Sobic003G260700 Sobic001G078600 Sobic001G078600 Sobic002G426800--Sobic001G078600 Sobic003G314900 Sobic003G314900 Sobic002G426800--Sobic003G314900 Sobic003G444100 Sobic003G444100 Sobic002G426800--Sobic003G444100 Sobic002G426800--Sobic010G105400 Sobic001G070300 Sobic001G070300 Sobic007G100600--Sobic001G070300 Sobic007G100600--Sobic004G257600 Sobic007G100600--Sobic003G387700 Sobic007G100600--Sobic003G328500 Sobic001G142000 Sobic001G142000 Sobic007G100600--Sobic001G142000 Sobic010G003100 Sobic010G003100 Sobic007G100600--Sobic010G003100 Sobic007G100600--Sobic006G134200 Sobic002G255500 Sobic002G255500 Sobic007G100600--Sobic002G255500 Sobic010G274000 Sobic010G274000 Sobic007G100600--Sobic010G274000 Sobic001G230300--Sobic001G091500 Sobic001G230300--Sobic003G387700 Sobic001G230300--Sobic008G114900 Sobic001G230300--Sobic003G102000 Sobic001G230300--Sobic004G339500 Sobic001G230300--Sobic010G119300 Sobic001G230300--Sobic003G260700 Sobic001G230300--Sobic008G125700 Sobic001G230300--Sobic002G222500 Sobic001G289900 Sobic001G289900 Sobic007G132900--Sobic001G289900 Sobic006G065400 Sobic006G065400 Sobic007G132900--Sobic006G065400 Sobic002G289800 Sobic002G289800 Sobic007G132900--Sobic002G289800 Sobic007G132900--Sobic003G102000 Sobic007G132900--Sobic009G120700 Sobic007G132900--Sobic010G119300 Sobic007G132900--Sobic003G260700 Sobic007G132900--Sobic004G198100 Sobic002G353200 Sobic002G353200 Sobic007G132900--Sobic002G353200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.