Gene annotation
Transcriptome id Sobic.003G328500.1
Synonym CYC1BAT, CYCB1, Sb03g037460, 2
Functional annotation Expressed in younger stem (PubMedID : 28649278)
cyclin, putative, expressed
UniProt C5XMJ2
Pfam PF02984 PF00134
Panther DB PTHR10177 PTHR10177:SF241
NCBI CDD KOG0653; Cyclin B and related kinase-activating proteins
KEGG Orthology K05868; G2/mitotic-specific cyclin-B1
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT5G06150 : Cyclin family protein
RAP-DB (Rice) LOC_Os01g59120.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a027163 , Zm00025a039828
Brachypodium KQK10215
Barley -
Wheat TraesCS3B02G363200 , TraesCS3D02G326600 , TraesCS3B02G363200 , TraesCS3B02G363200 , TraesCS3A02G333000 , TraesCS3A02G333000 , TraesCS3B02G363200 , TraesCS3D02G326600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G134200 expressed protein -
2 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
3 Sobic.001G075400 expressed protein -
4 Sobic.007G207700 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
5 Sobic.003G387700 expressed protein -
6 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
7 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
8 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
9 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.003G102000 expressed protein -
11 Sobic.007G100600 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.001G091500 expressed protein -
13 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
14 Sobic.010G119300 expressed protein -
15 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
16 Sobic.001G140600 expressed protein -
17 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
18 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
19 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
20 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex


Gene co-expression network
sample Sobic003G328500 Sobic003G328500 Sobic006G134200 Sobic006G134200 Sobic003G328500--Sobic006G134200 Sobic001G177900 Sobic001G177900 Sobic003G328500--Sobic001G177900 Sobic001G075400 Sobic001G075400 Sobic003G328500--Sobic001G075400 Sobic007G207700 Sobic007G207700 Sobic003G328500--Sobic007G207700 Sobic003G387700 Sobic003G387700 Sobic003G328500--Sobic003G387700 Sobic004G257600 Sobic004G257600 Sobic003G328500--Sobic004G257600 Sobic003G260700 Sobic003G260700 Sobic003G328500--Sobic003G260700 Sobic005G144600 Sobic005G144600 Sobic003G328500--Sobic005G144600 Sobic002G426800 Sobic002G426800 Sobic003G328500--Sobic002G426800 Sobic006G134200--Sobic003G328500 Sobic006G134200--Sobic003G387700 Sobic006G134200--Sobic007G207700 Sobic006G134200--Sobic004G257600 Sobic007G100600 Sobic007G100600 Sobic006G134200--Sobic007G100600 Sobic006G134200--Sobic001G075400 Sobic006G134200--Sobic001G177900 Sobic010G105400 Sobic010G105400 Sobic006G134200--Sobic010G105400 Sobic006G134200--Sobic005G144600 Sobic007G168900 Sobic007G168900 Sobic001G177900--Sobic007G168900 Sobic003G314900 Sobic003G314900 Sobic001G177900--Sobic003G314900 Sobic005G000500 Sobic005G000500 Sobic001G177900--Sobic005G000500 Sobic001G177900--Sobic003G260700 Sobic001G170800 Sobic001G170800 Sobic001G177900--Sobic001G170800 Sobic010G008900 Sobic010G008900 Sobic001G177900--Sobic010G008900 Sobic004G339500 Sobic004G339500 Sobic001G177900--Sobic004G339500 Sobic001G177900--Sobic005G144600 Sobic003G294500 Sobic003G294500 Sobic001G177900--Sobic003G294500 Sobic001G075400--Sobic003G328500 Sobic004G077100 Sobic004G077100 Sobic001G075400--Sobic004G077100 Sobic001G075400--Sobic001G177900 Sobic001G075400--Sobic006G134200 Sobic009G233500 Sobic009G233500 Sobic001G075400--Sobic009G233500 Sobic001G075400--Sobic007G207700 Sobic002G313000 Sobic002G313000 Sobic001G075400--Sobic002G313000 Sobic005G016300 Sobic005G016300 Sobic001G075400--Sobic005G016300 Sobic001G131300 Sobic001G131300 Sobic001G075400--Sobic001G131300 Sobic007G207700--Sobic003G328500 Sobic007G207700--Sobic006G134200 Sobic007G207700--Sobic005G016300 Sobic007G017700 Sobic007G017700 Sobic007G207700--Sobic007G017700 Sobic007G207700--Sobic001G075400 Sobic006G179200 Sobic006G179200 Sobic007G207700--Sobic006G179200 Sobic001G091500 Sobic001G091500 Sobic007G207700--Sobic001G091500 Sobic005G210600 Sobic005G210600 Sobic007G207700--Sobic005G210600 Sobic007G207700--Sobic002G313000 Sobic003G387700--Sobic004G257600 Sobic003G387700--Sobic006G134200 Sobic003G387700--Sobic010G105400 Sobic003G387700--Sobic001G091500 Sobic001G105800 Sobic001G105800 Sobic003G387700--Sobic001G105800 Sobic010G119300 Sobic010G119300 Sobic003G387700--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic003G387700--Sobic001G398400 Sobic003G387700--Sobic003G328500 Sobic003G387700--Sobic007G100600 Sobic004G257600--Sobic003G260700 Sobic004G257600--Sobic003G387700 Sobic004G257600--Sobic001G398400 Sobic004G257600--Sobic001G177900 Sobic004G198100 Sobic004G198100 Sobic004G257600--Sobic004G198100 Sobic004G257600--Sobic001G170800 Sobic003G444100 Sobic003G444100 Sobic004G257600--Sobic003G444100 Sobic004G257600--Sobic007G168900 Sobic004G257600--Sobic004G339500 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic003G260700--Sobic004G198100 Sobic004G271300 Sobic004G271300 Sobic003G260700--Sobic004G271300 Sobic008G006800 Sobic008G006800 Sobic003G260700--Sobic008G006800 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic005G144600--Sobic007G168900 Sobic005G144600--Sobic010G105400 Sobic005G144600--Sobic003G294500 Sobic005G144600--Sobic005G000500 Sobic005G144600--Sobic003G314900 Sobic005G144600--Sobic001G177900 Sobic004G047100 Sobic004G047100 Sobic005G144600--Sobic004G047100 Sobic005G144600--Sobic004G271300 Sobic003G179500 Sobic003G179500 Sobic005G144600--Sobic003G179500 Sobic009G181500 Sobic009G181500 Sobic002G426800--Sobic009G181500 Sobic002G426800--Sobic001G091500 Sobic002G426800--Sobic005G144600 Sobic002G426800--Sobic004G047100 Sobic002G426800--Sobic003G260700 Sobic001G078600 Sobic001G078600 Sobic002G426800--Sobic001G078600 Sobic002G426800--Sobic003G314900 Sobic002G426800--Sobic003G444100 Sobic002G426800--Sobic010G105400
Octagon: transcription factors


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