Gene annotation
Transcriptome id Sobic.002G313000.2,Sobic.002G313000.1
Synonym Sb02g034250, TPX2
Functional annotation targeting protein-related, putative, expressed
UniProt A0A1B6QEE5 , A0A1W0W6L7
Pfam PF06886 PF12214
Panther DB PTHR14326 PTHR14326:SF17
NCBI CDD -
KEGG Orthology K16812; targeting protein for Xklp2
Gene Ontology GO:0005874; microtubule GO:0005819spindle


Orthologs (automatic annotation)
TAIR AT1G03780 : targeting protein for XKLP2
RAP-DB (Rice) LOC_Os07g32390.1 : targeting protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a014746 , Zm00025a048175
Brachypodium KQK16088 , KQK16089
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
2 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
3 Sobic.008G114900 rhoGAP domain containing protein, expressed -
4 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
5 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
6 Sobic.001G140600 expressed protein -
7 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
8 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
9 Sobic.001G398400 expressed protein -
10 Sobic.004G198100 expressed protein -
11 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
12 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
13 Sobic.001G155700 expansin precursor, putative, expressed -
14 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
15 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
16 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
17 Sobic.007G116800 BURP domain containing protein, expressed -
18 Sobic.010G119300 expressed protein -
19 Sobic.006G219500 remorin family protein, putative, expressed -
20 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G313000 Sobic002G313000 Sobic010G129700 Sobic010G129700 Sobic002G313000--Sobic010G129700 Sobic003G260700 Sobic003G260700 Sobic002G313000--Sobic003G260700 Sobic008G114900 Sobic008G114900 Sobic002G313000--Sobic008G114900 Sobic008G006800 Sobic008G006800 Sobic002G313000--Sobic008G006800 Sobic008G125700 Sobic008G125700 Sobic002G313000--Sobic008G125700 Sobic001G140600 Sobic001G140600 Sobic002G313000--Sobic001G140600 Sobic002G319300 Sobic002G319300 Sobic002G313000--Sobic002G319300 Sobic001G170800 Sobic001G170800 Sobic002G313000--Sobic001G170800 Sobic001G398400 Sobic001G398400 Sobic002G313000--Sobic001G398400 Sobic010G129700--Sobic002G313000 Sobic009G184200 Sobic009G184200 Sobic010G129700--Sobic009G184200 Sobic010G129700--Sobic001G398400 Sobic010G129700--Sobic003G260700 Sobic001G493900 Sobic001G493900 Sobic010G129700--Sobic001G493900 Sobic010G129700--Sobic008G114900 Sobic004G267600 Sobic004G267600 Sobic010G129700--Sobic004G267600 Sobic007G116800 Sobic007G116800 Sobic010G129700--Sobic007G116800 Sobic010G129700--Sobic008G006800 Sobic003G260700--Sobic001G170800 Sobic004G257600 Sobic004G257600 Sobic003G260700--Sobic004G257600 Sobic004G339500 Sobic004G339500 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic004G198100 Sobic004G198100 Sobic003G260700--Sobic004G198100 Sobic004G271300 Sobic004G271300 Sobic003G260700--Sobic004G271300 Sobic003G260700--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic001G155700 Sobic001G155700 Sobic008G114900--Sobic001G155700 Sobic010G119300 Sobic010G119300 Sobic008G114900--Sobic010G119300 Sobic006G219500 Sobic006G219500 Sobic008G114900--Sobic006G219500 Sobic008G114900--Sobic002G319300 Sobic008G114900--Sobic003G260700 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic005G005700 Sobic005G005700 Sobic008G006800--Sobic005G005700 Sobic008G006800--Sobic010G119300 Sobic008G006800--Sobic003G260700 Sobic008G006800--Sobic001G398400 Sobic008G006800--Sobic004G339500 Sobic010G017400 Sobic010G017400 Sobic008G006800--Sobic010G017400 Sobic008G006800--Sobic004G271300 Sobic008G006800--Sobic002G313000 Sobic002G296000 Sobic002G296000 Sobic008G006800--Sobic002G296000 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic003G102000 Sobic003G102000 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic008G125700--Sobic004G198100 Sobic008G125700--Sobic008G006800 Sobic008G125700--Sobic002G313000 Sobic008G125700--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic008G125700--Sobic005G199700 Sobic001G140600--Sobic002G313000 Sobic001G140600--Sobic008G006800 Sobic001G140600--Sobic001G177900 Sobic001G540900 Sobic001G540900 Sobic001G140600--Sobic001G540900 Sobic001G140600--Sobic003G260700 Sobic001G140600--Sobic004G271300 Sobic010G215300 Sobic010G215300 Sobic001G140600--Sobic010G215300 Sobic001G140600--Sobic003G102000 Sobic001G140600--Sobic004G339500 Sobic002G319300--Sobic001G155700 Sobic002G319300--Sobic008G114900 Sobic002G319300--Sobic001G493900 Sobic002G319300--Sobic002G313000 Sobic003G307200 Sobic003G307200 Sobic002G319300--Sobic003G307200 Sobic010G192500 Sobic010G192500 Sobic002G319300--Sobic010G192500 Sobic001G008300 Sobic001G008300 Sobic002G319300--Sobic001G008300 Sobic006G221800 Sobic006G221800 Sobic002G319300--Sobic006G221800 Sobic002G319300--Sobic006G219500 Sobic005G000500 Sobic005G000500 Sobic001G170800--Sobic005G000500 Sobic001G170800--Sobic003G260700 Sobic003G444100 Sobic003G444100 Sobic001G170800--Sobic003G444100 Sobic001G170800--Sobic001G398400 Sobic001G170800--Sobic004G271300 Sobic008G148000 Sobic008G148000 Sobic001G170800--Sobic008G148000 Sobic010G008900 Sobic010G008900 Sobic001G170800--Sobic010G008900 Sobic001G170800--Sobic001G177900 Sobic001G170800--Sobic004G339500 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic001G398400--Sobic008G006800 Sobic001G398400--Sobic009G184200 Sobic001G398400--Sobic004G271300 Sobic001G398400--Sobic005G005700 Sobic010G105400 Sobic010G105400 Sobic001G398400--Sobic010G105400 Sobic001G398400--Sobic004G198100 Sobic001G398400--Sobic004G257600
Octagon: transcription factors


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