Gene annotation
Transcriptome id Sobic.006G219500.1,Sobic.006G219500.3,Sobic.006G219500.2
Synonym Sb06g028890
Functional annotation remorin family protein, putative, expressed
UniProt C5YG53 , A0A1Z5RF35
Pfam PF03763
Panther DB PTHR31471 PTHR31471:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30320 : Remorin family protein
RAP-DB (Rice) LOC_Os04g52920.1 : remorin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a009732
Brachypodium KQJ84656 , PNT61874
Barley HORVU2Hr1G103570.10 , HORVU2Hr1G103570.2 , HORVU2Hr1G103570.3 , HORVU2Hr1G103570.1 , HORVU2Hr1G103570.6 , HORVU2Hr1G103570.7 , HORVU2Hr1G103570.4 , HORVU2Hr1G103570.5 , HORVU2Hr1G103570.8 , HORVU2Hr1G103570.9
Wheat TraesCS2A02G464000 , TraesCS2D02G464900 , TraesCS2D02G464900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G114900 rhoGAP domain containing protein, expressed -
2 Sobic.001G155700 expansin precursor, putative, expressed -
3 Sobic.001G493900 beta-galactosidase, putative, expressed -
4 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
5 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
6 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
7 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
8 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
9 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
10 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
11 Sobic.002G394500 proline-rich family protein, putative, expressed -
12 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
13 Sobic.010G241100 thaumatin family domain containing protein, expressed -
14 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
15 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
16 Sobic.009G060800 carboxyl-terminal proteinase, putative, expressed -
17 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
18 Sobic.001G140600 expressed protein -
19 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
20 Sobic.003G102000 expressed protein -


Gene co-expression network
sample Sobic006G219500 Sobic006G219500 Sobic008G114900 Sobic008G114900 Sobic006G219500--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic006G219500--Sobic001G155700 Sobic001G493900 Sobic001G493900 Sobic006G219500--Sobic001G493900 Sobic010G129700 Sobic010G129700 Sobic006G219500--Sobic010G129700 Sobic009G146700 Sobic009G146700 Sobic006G219500--Sobic009G146700 Sobic002G313000 Sobic002G313000 Sobic006G219500--Sobic002G313000 Sobic002G319300 Sobic002G319300 Sobic006G219500--Sobic002G319300 Sobic008G125700 Sobic008G125700 Sobic006G219500--Sobic008G125700 Sobic001G496400 Sobic001G496400 Sobic006G219500--Sobic001G496400 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic008G114900--Sobic001G155700 Sobic010G119300 Sobic010G119300 Sobic008G114900--Sobic010G119300 Sobic008G114900--Sobic006G219500 Sobic008G114900--Sobic002G319300 Sobic003G260700 Sobic003G260700 Sobic008G114900--Sobic003G260700 Sobic008G114900--Sobic001G493900 Sobic008G006800 Sobic008G006800 Sobic008G114900--Sobic008G006800 Sobic001G155700--Sobic002G319300 Sobic001G155700--Sobic008G114900 Sobic001G155700--Sobic001G493900 Sobic010G192500 Sobic010G192500 Sobic001G155700--Sobic010G192500 Sobic001G155700--Sobic006G219500 Sobic001G155700--Sobic002G313000 Sobic003G089300 Sobic003G089300 Sobic001G155700--Sobic003G089300 Sobic002G394500 Sobic002G394500 Sobic001G155700--Sobic002G394500 Sobic007G160300 Sobic007G160300 Sobic001G155700--Sobic007G160300 Sobic004G267600 Sobic004G267600 Sobic001G493900--Sobic004G267600 Sobic003G019900 Sobic003G019900 Sobic001G493900--Sobic003G019900 Sobic001G493900--Sobic010G129700 Sobic001G493900--Sobic002G319300 Sobic001G493900--Sobic008G114900 Sobic001G493900--Sobic001G155700 Sobic001G493900--Sobic010G192500 Sobic002G417000 Sobic002G417000 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700 Sobic010G129700--Sobic002G313000 Sobic009G184200 Sobic009G184200 Sobic010G129700--Sobic009G184200 Sobic001G398400 Sobic001G398400 Sobic010G129700--Sobic001G398400 Sobic010G129700--Sobic003G260700 Sobic010G129700--Sobic001G493900 Sobic010G129700--Sobic008G114900 Sobic010G129700--Sobic004G267600 Sobic007G116800 Sobic007G116800 Sobic010G129700--Sobic007G116800 Sobic010G129700--Sobic008G006800 Sobic005G199700 Sobic005G199700 Sobic009G146700--Sobic005G199700 Sobic009G146700--Sobic003G338700 Sobic002G363300 Sobic002G363300 Sobic009G146700--Sobic002G363300 Sobic010G014700 Sobic010G014700 Sobic009G146700--Sobic010G014700 Sobic003G010700 Sobic003G010700 Sobic009G146700--Sobic003G010700 Sobic001G286700 Sobic001G286700 Sobic009G146700--Sobic001G286700 Sobic007G180200 Sobic007G180200 Sobic009G146700--Sobic007G180200 Sobic006G107500 Sobic006G107500 Sobic009G146700--Sobic006G107500 Sobic010G014500 Sobic010G014500 Sobic009G146700--Sobic010G014500 Sobic002G313000--Sobic010G129700 Sobic002G313000--Sobic003G260700 Sobic002G313000--Sobic008G114900 Sobic002G313000--Sobic008G006800 Sobic002G313000--Sobic008G125700 Sobic001G140600 Sobic001G140600 Sobic002G313000--Sobic001G140600 Sobic002G313000--Sobic002G319300 Sobic001G170800 Sobic001G170800 Sobic002G313000--Sobic001G170800 Sobic002G313000--Sobic001G398400 Sobic002G319300--Sobic001G155700 Sobic002G319300--Sobic008G114900 Sobic002G319300--Sobic001G493900 Sobic002G319300--Sobic002G313000 Sobic003G307200 Sobic003G307200 Sobic002G319300--Sobic003G307200 Sobic002G319300--Sobic010G192500 Sobic001G008300 Sobic001G008300 Sobic002G319300--Sobic001G008300 Sobic006G221800 Sobic006G221800 Sobic002G319300--Sobic006G221800 Sobic002G319300--Sobic006G219500 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic003G102000 Sobic003G102000 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic004G198100 Sobic004G198100 Sobic008G125700--Sobic004G198100 Sobic008G125700--Sobic008G006800 Sobic008G125700--Sobic002G313000 Sobic004G339500 Sobic004G339500 Sobic008G125700--Sobic004G339500 Sobic008G125700--Sobic005G199700 Sobic001G496400--Sobic006G221800 Sobic007G209200 Sobic007G209200 Sobic001G496400--Sobic007G209200 Sobic001G496400--Sobic008G114900 Sobic001G496400--Sobic006G219500 Sobic004G003700 Sobic004G003700 Sobic001G496400--Sobic004G003700 Sobic001G496400--Sobic008G125700 Sobic006G124400 Sobic006G124400 Sobic001G496400--Sobic006G124400 Sobic001G496400--Sobic010G119300 Sobic001G101700 Sobic001G101700 Sobic001G496400--Sobic001G101700
Octagon: transcription factors


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