Gene annotation
Transcriptome id Sobic.002G394500.1,Sobic.002G394500.3,Sobic.002G394500.4,Sobic.002G394500.2
Synonym Sb02g040980
Functional annotation proline-rich family protein, putative, expressed
UniProt C5X3Y5
Pfam PF16711 PF16712 PF16709
Panther DB PTHR31172 PTHR31172:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26770 : plectin-related
RAP-DB (Rice) LOC_Os07g44830.1 : proline-rich family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048948 , Zm00025a055973
Brachypodium PNT74656 , PNT74657 , KQK14962
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G155700 expansin precursor, putative, expressed -
2 Sobic.006G219500 remorin family protein, putative, expressed -
3 Sobic.010G241100 thaumatin family domain containing protein, expressed -
4 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
5 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
6 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
7 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
8 Sobic.008G114900 rhoGAP domain containing protein, expressed -
9 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
10 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
11 Sobic.001G140600 expressed protein -
12 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
14 Sobic.002G146601 - -
15 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
16 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
17 Sobic.003G307200 expressed protein -
18 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
19 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
20 Sobic.001G398400 expressed protein -


Gene co-expression network
sample Sobic002G394500 Sobic002G394500 Sobic001G155700 Sobic001G155700 Sobic002G394500--Sobic001G155700 Sobic006G219500 Sobic006G219500 Sobic002G394500--Sobic006G219500 Sobic010G241100 Sobic010G241100 Sobic002G394500--Sobic010G241100 Sobic006G105600 Sobic006G105600 Sobic002G394500--Sobic006G105600 Sobic002G319300 Sobic002G319300 Sobic002G394500--Sobic002G319300 Sobic010G192500 Sobic010G192500 Sobic002G394500--Sobic010G192500 Sobic003G260700 Sobic003G260700 Sobic002G394500--Sobic003G260700 Sobic008G114900 Sobic008G114900 Sobic002G394500--Sobic008G114900 Sobic002G313000 Sobic002G313000 Sobic002G394500--Sobic002G313000 Sobic001G155700--Sobic002G319300 Sobic001G155700--Sobic008G114900 Sobic001G493900 Sobic001G493900 Sobic001G155700--Sobic001G493900 Sobic001G155700--Sobic010G192500 Sobic001G155700--Sobic006G219500 Sobic001G155700--Sobic002G313000 Sobic003G089300 Sobic003G089300 Sobic001G155700--Sobic003G089300 Sobic001G155700--Sobic002G394500 Sobic007G160300 Sobic007G160300 Sobic001G155700--Sobic007G160300 Sobic006G219500--Sobic008G114900 Sobic006G219500--Sobic001G155700 Sobic006G219500--Sobic001G493900 Sobic010G129700 Sobic010G129700 Sobic006G219500--Sobic010G129700 Sobic009G146700 Sobic009G146700 Sobic006G219500--Sobic009G146700 Sobic006G219500--Sobic002G313000 Sobic006G219500--Sobic002G319300 Sobic008G125700 Sobic008G125700 Sobic006G219500--Sobic008G125700 Sobic001G496400 Sobic001G496400 Sobic006G219500--Sobic001G496400 Sobic010G241100--Sobic010G192500 Sobic010G086000 Sobic010G086000 Sobic010G241100--Sobic010G086000 Sobic003G032200 Sobic003G032200 Sobic010G241100--Sobic003G032200 Sobic002G337600 Sobic002G337600 Sobic010G241100--Sobic002G337600 Sobic010G241100--Sobic002G394500 Sobic002G222500 Sobic002G222500 Sobic010G241100--Sobic002G222500 Sobic010G023400 Sobic010G023400 Sobic010G241100--Sobic010G023400 Sobic001G452900 Sobic001G452900 Sobic010G241100--Sobic001G452900 Sobic010G241100--Sobic007G160300 Sobic005G091000 Sobic005G091000 Sobic006G105600--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic006G105600--Sobic001G267100 Sobic006G124400 Sobic006G124400 Sobic006G105600--Sobic006G124400 Sobic002G296000 Sobic002G296000 Sobic006G105600--Sobic002G296000 Sobic009G137500 Sobic009G137500 Sobic006G105600--Sobic009G137500 Sobic006G105600--Sobic002G394500 Sobic004G233700 Sobic004G233700 Sobic006G105600--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic006G105600--Sobic008G083500 Sobic001G304800 Sobic001G304800 Sobic006G105600--Sobic001G304800 Sobic002G319300--Sobic001G155700 Sobic002G319300--Sobic008G114900 Sobic002G319300--Sobic001G493900 Sobic002G319300--Sobic002G313000 Sobic003G307200 Sobic003G307200 Sobic002G319300--Sobic003G307200 Sobic002G319300--Sobic010G192500 Sobic001G008300 Sobic001G008300 Sobic002G319300--Sobic001G008300 Sobic006G221800 Sobic006G221800 Sobic002G319300--Sobic006G221800 Sobic002G319300--Sobic006G219500 Sobic009G060800 Sobic009G060800 Sobic010G192500--Sobic009G060800 Sobic010G192500--Sobic003G089300 Sobic010G192500--Sobic002G337600 Sobic003G366000 Sobic003G366000 Sobic010G192500--Sobic003G366000 Sobic010G192500--Sobic010G241100 Sobic010G192500--Sobic001G155700 Sobic010G192500--Sobic001G493900 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic001G170800 Sobic001G170800 Sobic003G260700--Sobic001G170800 Sobic004G257600 Sobic004G257600 Sobic003G260700--Sobic004G257600 Sobic004G339500 Sobic004G339500 Sobic003G260700--Sobic004G339500 Sobic001G398400 Sobic001G398400 Sobic003G260700--Sobic001G398400 Sobic004G198100 Sobic004G198100 Sobic003G260700--Sobic004G198100 Sobic004G271300 Sobic004G271300 Sobic003G260700--Sobic004G271300 Sobic008G006800 Sobic008G006800 Sobic003G260700--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic008G114900--Sobic001G155700 Sobic010G119300 Sobic010G119300 Sobic008G114900--Sobic010G119300 Sobic008G114900--Sobic006G219500 Sobic008G114900--Sobic002G319300 Sobic008G114900--Sobic003G260700 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic002G313000--Sobic010G129700 Sobic002G313000--Sobic003G260700 Sobic002G313000--Sobic008G114900 Sobic002G313000--Sobic008G006800 Sobic002G313000--Sobic008G125700 Sobic001G140600 Sobic001G140600 Sobic002G313000--Sobic001G140600 Sobic002G313000--Sobic002G319300 Sobic002G313000--Sobic001G170800 Sobic002G313000--Sobic001G398400
Octagon: transcription factors


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