Gene annotation
Transcriptome id Sobic.001G496400.1
Synonym Sb01g046365, SbEPFL5, epidermal patterning factor/EPF-like
Functional annotation Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure. (PubMedID : 23755192)
expressed protein
UniProt C5WWY1
Pfam -
Panther DB PTHR33109 PTHR33109:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14723 : -
RAP-DB (Rice) LOC_Os03g06610.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK23529
Barley HORVU4Hr1G073590.6 , HORVU4Hr1G073590.7 , HORVU4Hr1G073590.4 , HORVU4Hr1G073590.5 , HORVU4Hr1G073590.2 , HORVU4Hr1G073590.3 , HORVU4Hr1G073590.1 , HORVU4Hr1G073590.8
Wheat TraesCS4B02G277700 , TraesCS4D02G276000 , TraesCS4A02G028300
Populus -


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cDNA sequences
Sobic.001G496400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
2 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
3 Sobic.008G114900 rhoGAP domain containing protein, expressed -
4 Sobic.006G219500 remorin family protein, putative, expressed -
5 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
6 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
7 Sobic.006G124400 ATP binding protein, putative, expressed -
8 Sobic.010G119300 expressed protein -
9 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
10 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
11 Sobic.001G155700 expansin precursor, putative, expressed -
12 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
13 Sobic.001G493900 beta-galactosidase, putative, expressed -
14 Sobic.002G360500 expressed protein -
15 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
16 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
18 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
19 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
20 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G496400 Sobic001G496400 Sobic006G221800 Sobic006G221800 Sobic001G496400--Sobic006G221800 Sobic007G209200 Sobic007G209200 Sobic001G496400--Sobic007G209200 Sobic008G114900 Sobic008G114900 Sobic001G496400--Sobic008G114900 Sobic006G219500 Sobic006G219500 Sobic001G496400--Sobic006G219500 Sobic004G003700 Sobic004G003700 Sobic001G496400--Sobic004G003700 Sobic008G125700 Sobic008G125700 Sobic001G496400--Sobic008G125700 Sobic006G124400 Sobic006G124400 Sobic001G496400--Sobic006G124400 Sobic010G119300 Sobic010G119300 Sobic001G496400--Sobic010G119300 Sobic001G101700 Sobic001G101700 Sobic001G496400--Sobic001G101700 Sobic006G221800--Sobic001G496400 Sobic006G221800--Sobic001G101700 Sobic006G221800--Sobic008G114900 Sobic006G221800--Sobic004G003700 Sobic002G050700 Sobic002G050700 Sobic006G221800--Sobic002G050700 Sobic008G151600 Sobic008G151600 Sobic006G221800--Sobic008G151600 Sobic002G319300 Sobic002G319300 Sobic006G221800--Sobic002G319300 Sobic009G087700 Sobic009G087700 Sobic006G221800--Sobic009G087700 Sobic001G493900 Sobic001G493900 Sobic006G221800--Sobic001G493900 Sobic008G138000 Sobic008G138000 Sobic007G209200--Sobic008G138000 Sobic007G209200--Sobic004G003700 Sobic003G002000 Sobic003G002000 Sobic007G209200--Sobic003G002000 Sobic007G209200--Sobic001G496400 Sobic006G274200 Sobic006G274200 Sobic007G209200--Sobic006G274200 Sobic009G208300 Sobic009G208300 Sobic007G209200--Sobic009G208300 Sobic001G143400 Sobic001G143400 Sobic007G209200--Sobic001G143400 Sobic007G209200--Sobic001G101700 Sobic007G147200 Sobic007G147200 Sobic007G209200--Sobic007G147200 Sobic008G114900--Sobic008G125700 Sobic002G313000 Sobic002G313000 Sobic008G114900--Sobic002G313000 Sobic001G155700 Sobic001G155700 Sobic008G114900--Sobic001G155700 Sobic008G114900--Sobic010G119300 Sobic008G114900--Sobic006G219500 Sobic008G114900--Sobic002G319300 Sobic003G260700 Sobic003G260700 Sobic008G114900--Sobic003G260700 Sobic008G114900--Sobic001G493900 Sobic008G006800 Sobic008G006800 Sobic008G114900--Sobic008G006800 Sobic006G219500--Sobic008G114900 Sobic006G219500--Sobic001G155700 Sobic006G219500--Sobic001G493900 Sobic010G129700 Sobic010G129700 Sobic006G219500--Sobic010G129700 Sobic009G146700 Sobic009G146700 Sobic006G219500--Sobic009G146700 Sobic006G219500--Sobic002G313000 Sobic006G219500--Sobic002G319300 Sobic006G219500--Sobic008G125700 Sobic006G219500--Sobic001G496400 Sobic004G003700--Sobic001G143400 Sobic004G003700--Sobic007G209200 Sobic010G168700 Sobic010G168700 Sobic004G003700--Sobic010G168700 Sobic004G003700--Sobic007G147200 Sobic004G003700--Sobic006G221800 Sobic009G047500 Sobic009G047500 Sobic004G003700--Sobic009G047500 Sobic004G003700--Sobic001G101700 Sobic005G168400 Sobic005G168400 Sobic004G003700--Sobic005G168400 Sobic004G003700--Sobic008G138000 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic003G102000 Sobic003G102000 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic004G198100 Sobic004G198100 Sobic008G125700--Sobic004G198100 Sobic008G125700--Sobic008G006800 Sobic008G125700--Sobic002G313000 Sobic004G339500 Sobic004G339500 Sobic008G125700--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic008G125700--Sobic005G199700 Sobic002G296000 Sobic002G296000 Sobic006G124400--Sobic002G296000 Sobic010G105400 Sobic010G105400 Sobic006G124400--Sobic010G105400 Sobic009G101100 Sobic009G101100 Sobic006G124400--Sobic009G101100 Sobic007G027900 Sobic007G027900 Sobic006G124400--Sobic007G027900 Sobic004G273000 Sobic004G273000 Sobic006G124400--Sobic004G273000 Sobic005G005700 Sobic005G005700 Sobic006G124400--Sobic005G005700 Sobic006G124400--Sobic008G006800 Sobic001G477400 Sobic001G477400 Sobic006G124400--Sobic001G477400 Sobic001G398400 Sobic001G398400 Sobic006G124400--Sobic001G398400 Sobic010G119300--Sobic008G125700 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic010G119300--Sobic003G102000 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic010G119300--Sobic008G114900 Sobic010G119300--Sobic001G398400 Sobic001G101700--Sobic006G221800 Sobic010G255000 Sobic010G255000 Sobic001G101700--Sobic010G255000 Sobic001G101700--Sobic004G003700 Sobic001G101700--Sobic007G147200 Sobic007G201900 Sobic007G201900 Sobic001G101700--Sobic007G201900 Sobic001G101700--Sobic007G209200 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G101700--Sobic001G143400
Octagon: transcription factors


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