Gene annotation
Transcriptome id Sobic.004G003700.1
Synonym SbTri05, Sb04g000520
Functional annotation Trihelix Family (PubMedID : 24864043)
expressed protein
UniProt C5XRJ0
Pfam PF13837
Panther DB PTHR21654 PTHR21654:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76890 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os02g01380.1 : expressed protein
MaizeGDB (Corn) Zm00025a017424 , Zm00025a056623 , Zm00025a010385 , Zm00025a032162 , Zm00025a035087 , Zm00025a000196 , Zm00025a018641
Brachypodium KQJ83849 , KQJ83848 , KQJ97389 , KQJ97388 , PNT67683 , KQJ83854 , KQJ83850 , KQJ83851 , KQJ83852 , KQJ83853 , KQJ97390 , PNT69145 , KQK24020 , KQJ92790
Barley HORVU2Hr1G092650.6 , HORVU2Hr1G092650.7 , HORVU2Hr1G092650.4 , HORVU2Hr1G092650.5 , HORVU2Hr1G092650.2 , HORVU2Hr1G092650.3 , HORVU2Hr1G092650.1 , HORVU1Hr1G046940.8 , HORVU1Hr1G046940.9 , HORVU1Hr1G046940.4 , HORVU1Hr1G046940.5 , HORVU1Hr1G046940.6 , HORVU1Hr1G046940.7 , HORVU1Hr1G046940.1 , HORVU1Hr1G046940.2 , HORVU1Hr1G046940.3 , HORVU3Hr1G011160.1 , HORVU0Hr1G014900.2 , HORVU0Hr1G014900.1 , HORVU0Hr1G014900.4 , HORVU4Hr1G089120.2 , HORVU4Hr1G089120.3 , HORVU4Hr1G089120.1 , HORVU4Hr1G089120.6 , HORVU4Hr1G089120.4 , HORVU0Hr1G014900.3
Wheat TraesCS1D02G162400 , TraesCS1D02G162400 , TraesCS6D02G016300 , TraesCS4B02G396900 , TraesCS2A02G389200 , TraesCS2A02G389200 , TraesCS2A02G389200 , TraesCS1A02G176700 , TraesCS1A02G176700 , TraesCS1B02G203300 , TraesCS1B02G203300 , TraesCS6D02G222500 , TraesCS6D02G222500 , TraesCS6D02G222500 , TraesCS6A02G013200 , TraesCS6A02G013200 , TraesCS6B02G284400 , TraesCS6B02G284400 , TraesCS6B02G284400 , TraesCS6B02G020100 , TraesCS2D02G387100 , TraesCS2D02G387100 , TraesCS2D02G387100 , TraesCS2B02G407400 , TraesCS2B02G407400 , TraesCS2B02G407400 , TraesCS2B02G407400 , TraesCS5A02G558200 , TraesCSU02G029700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
2 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
3 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
5 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
6 Sobic.009G047500 E3 ubiquitin-protein ligase SINA-like, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
8 Sobic.005G168400 expressed protein -
9 Sobic.008G138000 XH domain containing protein, expressed -
10 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
11 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
12 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.002G360500 expressed protein -
14 Sobic.010G014500 aspartic protease, putative, expressed -
15 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
16 Sobic.001G493900 beta-galactosidase, putative, expressed -
17 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
18 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.008G114900 rhoGAP domain containing protein, expressed -
20 Sobic.009G087700 proline-rich family protein, putative, expressed -


Gene co-expression network
sample Sobic004G003700 Sobic004G003700 Sobic001G143400 Sobic001G143400 Sobic004G003700--Sobic001G143400 Sobic007G209200 Sobic007G209200 Sobic004G003700--Sobic007G209200 Sobic010G168700 Sobic010G168700 Sobic004G003700--Sobic010G168700 Sobic007G147200 Sobic007G147200 Sobic004G003700--Sobic007G147200 Sobic006G221800 Sobic006G221800 Sobic004G003700--Sobic006G221800 Sobic009G047500 Sobic009G047500 Sobic004G003700--Sobic009G047500 Sobic001G101700 Sobic001G101700 Sobic004G003700--Sobic001G101700 Sobic005G168400 Sobic005G168400 Sobic004G003700--Sobic005G168400 Sobic008G138000 Sobic008G138000 Sobic004G003700--Sobic008G138000 Sobic001G143400--Sobic004G003700 Sobic001G143400--Sobic010G168700 Sobic001G143400--Sobic005G168400 Sobic001G143400--Sobic007G147200 Sobic010G070900 Sobic010G070900 Sobic001G143400--Sobic010G070900 Sobic001G143400--Sobic009G047500 Sobic005G199700 Sobic005G199700 Sobic001G143400--Sobic005G199700 Sobic001G143400--Sobic008G138000 Sobic001G143400--Sobic007G209200 Sobic007G209200--Sobic008G138000 Sobic007G209200--Sobic004G003700 Sobic003G002000 Sobic003G002000 Sobic007G209200--Sobic003G002000 Sobic001G496400 Sobic001G496400 Sobic007G209200--Sobic001G496400 Sobic006G274200 Sobic006G274200 Sobic007G209200--Sobic006G274200 Sobic009G208300 Sobic009G208300 Sobic007G209200--Sobic009G208300 Sobic007G209200--Sobic001G143400 Sobic007G209200--Sobic001G101700 Sobic007G209200--Sobic007G147200 Sobic010G168700--Sobic009G047500 Sobic010G168700--Sobic001G143400 Sobic010G168700--Sobic005G168400 Sobic010G168700--Sobic004G003700 Sobic010G168700--Sobic010G070900 Sobic010G168700--Sobic005G199700 Sobic010G276600 Sobic010G276600 Sobic010G168700--Sobic010G276600 Sobic002G426000 Sobic002G426000 Sobic010G168700--Sobic002G426000 Sobic006G273600 Sobic006G273600 Sobic010G168700--Sobic006G273600 Sobic007G147200--Sobic010G070900 Sobic010G255000 Sobic010G255000 Sobic007G147200--Sobic010G255000 Sobic007G147200--Sobic004G003700 Sobic003G046400 Sobic003G046400 Sobic007G147200--Sobic003G046400 Sobic006G163300 Sobic006G163300 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic003G019900 Sobic003G019900 Sobic007G147200--Sobic003G019900 Sobic006G107500 Sobic006G107500 Sobic007G147200--Sobic006G107500 Sobic007G147200--Sobic001G101700 Sobic006G221800--Sobic001G496400 Sobic006G221800--Sobic001G101700 Sobic008G114900 Sobic008G114900 Sobic006G221800--Sobic008G114900 Sobic006G221800--Sobic004G003700 Sobic002G050700 Sobic002G050700 Sobic006G221800--Sobic002G050700 Sobic008G151600 Sobic008G151600 Sobic006G221800--Sobic008G151600 Sobic002G319300 Sobic002G319300 Sobic006G221800--Sobic002G319300 Sobic009G087700 Sobic009G087700 Sobic006G221800--Sobic009G087700 Sobic001G493900 Sobic001G493900 Sobic006G221800--Sobic001G493900 Sobic009G047500--Sobic010G168700 Sobic009G047500--Sobic004G003700 Sobic009G047500--Sobic001G143400 Sobic001G393200 Sobic001G393200 Sobic009G047500--Sobic001G393200 Sobic009G047500--Sobic005G168400 Sobic010G235300 Sobic010G235300 Sobic009G047500--Sobic010G235300 Sobic001G347201 Sobic001G347201 Sobic009G047500--Sobic001G347201 Sobic006G084201 Sobic006G084201 Sobic009G047500--Sobic006G084201 Sobic009G047500--Sobic006G273600 Sobic001G101700--Sobic006G221800 Sobic001G101700--Sobic010G255000 Sobic001G101700--Sobic004G003700 Sobic001G101700--Sobic007G147200 Sobic007G201900 Sobic007G201900 Sobic001G101700--Sobic007G201900 Sobic001G101700--Sobic007G209200 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G101700--Sobic001G143400 Sobic005G168400--Sobic010G168700 Sobic005G168400--Sobic001G143400 Sobic005G168400--Sobic004G003700 Sobic003G319900 Sobic003G319900 Sobic005G168400--Sobic003G319900 Sobic005G168400--Sobic001G393200 Sobic005G168400--Sobic009G047500 Sobic005G168400--Sobic005G199700 Sobic001G379900 Sobic001G379900 Sobic005G168400--Sobic001G379900 Sobic007G152300 Sobic007G152300 Sobic005G168400--Sobic007G152300 Sobic008G138000--Sobic007G209200 Sobic008G138000--Sobic004G003700 Sobic008G138000--Sobic001G143400 Sobic008G138000--Sobic007G147200 Sobic008G138000--Sobic006G163300 Sobic008G138000--Sobic010G168700 Sobic008G138000--Sobic001G101700 Sobic008G138000--Sobic003G002000 Sobic010G077000 Sobic010G077000 Sobic008G138000--Sobic010G077000
Octagon: transcription factors


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