Gene annotation
Transcriptome id Sobic.008G138000.3,Sobic.008G138000.2,Sobic.008G138000.1
Synonym Sb08g018875
Functional annotation XH domain containing protein, expressed
UniProt A0A1Z5R7I8 , A0A1B6PDJ8
Pfam PF03469
Panther DB PTHR21596 PTHR21596:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15910 : XH/XS domain-containing protein
RAP-DB (Rice) LOC_Os12g38440.1 : XH domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
2 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
3 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
4 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
5 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
6 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
8 Sobic.003G002000 expressed protein -
9 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
10 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
11 Sobic.008G151600 PMR5, putative, expressed -
12 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
13 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
14 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
15 Sobic.010G247000 expressed protein -
16 Sobic.010G276600 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
17 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
18 Sobic.009G047500 E3 ubiquitin-protein ligase SINA-like, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.001G175100 DEK C terminal domain containing protein, expressed -
20 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -


Gene co-expression network
sample Sobic008G138000 Sobic008G138000 Sobic007G209200 Sobic007G209200 Sobic008G138000--Sobic007G209200 Sobic004G003700 Sobic004G003700 Sobic008G138000--Sobic004G003700 Sobic001G143400 Sobic001G143400 Sobic008G138000--Sobic001G143400 Sobic007G147200 Sobic007G147200 Sobic008G138000--Sobic007G147200 Sobic006G163300 Sobic006G163300 Sobic008G138000--Sobic006G163300 Sobic010G168700 Sobic010G168700 Sobic008G138000--Sobic010G168700 Sobic001G101700 Sobic001G101700 Sobic008G138000--Sobic001G101700 Sobic003G002000 Sobic003G002000 Sobic008G138000--Sobic003G002000 Sobic010G077000 Sobic010G077000 Sobic008G138000--Sobic010G077000 Sobic007G209200--Sobic008G138000 Sobic007G209200--Sobic004G003700 Sobic007G209200--Sobic003G002000 Sobic001G496400 Sobic001G496400 Sobic007G209200--Sobic001G496400 Sobic006G274200 Sobic006G274200 Sobic007G209200--Sobic006G274200 Sobic009G208300 Sobic009G208300 Sobic007G209200--Sobic009G208300 Sobic007G209200--Sobic001G143400 Sobic007G209200--Sobic001G101700 Sobic007G209200--Sobic007G147200 Sobic004G003700--Sobic001G143400 Sobic004G003700--Sobic007G209200 Sobic004G003700--Sobic010G168700 Sobic004G003700--Sobic007G147200 Sobic006G221800 Sobic006G221800 Sobic004G003700--Sobic006G221800 Sobic009G047500 Sobic009G047500 Sobic004G003700--Sobic009G047500 Sobic004G003700--Sobic001G101700 Sobic005G168400 Sobic005G168400 Sobic004G003700--Sobic005G168400 Sobic004G003700--Sobic008G138000 Sobic001G143400--Sobic004G003700 Sobic001G143400--Sobic010G168700 Sobic001G143400--Sobic005G168400 Sobic001G143400--Sobic007G147200 Sobic010G070900 Sobic010G070900 Sobic001G143400--Sobic010G070900 Sobic001G143400--Sobic009G047500 Sobic005G199700 Sobic005G199700 Sobic001G143400--Sobic005G199700 Sobic001G143400--Sobic008G138000 Sobic001G143400--Sobic007G209200 Sobic007G147200--Sobic010G070900 Sobic010G255000 Sobic010G255000 Sobic007G147200--Sobic010G255000 Sobic007G147200--Sobic004G003700 Sobic003G046400 Sobic003G046400 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic003G019900 Sobic003G019900 Sobic007G147200--Sobic003G019900 Sobic006G107500 Sobic006G107500 Sobic007G147200--Sobic006G107500 Sobic007G147200--Sobic001G101700 Sobic002G360600 Sobic002G360600 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic006G163300--Sobic010G070900 Sobic006G163300--Sobic007G147200 Sobic007G033700 Sobic007G033700 Sobic006G163300--Sobic007G033700 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic010G168700--Sobic009G047500 Sobic010G168700--Sobic001G143400 Sobic010G168700--Sobic005G168400 Sobic010G168700--Sobic004G003700 Sobic010G168700--Sobic010G070900 Sobic010G168700--Sobic005G199700 Sobic010G276600 Sobic010G276600 Sobic010G168700--Sobic010G276600 Sobic002G426000 Sobic002G426000 Sobic010G168700--Sobic002G426000 Sobic006G273600 Sobic006G273600 Sobic010G168700--Sobic006G273600 Sobic001G101700--Sobic006G221800 Sobic001G101700--Sobic010G255000 Sobic001G101700--Sobic004G003700 Sobic001G101700--Sobic007G147200 Sobic007G201900 Sobic007G201900 Sobic001G101700--Sobic007G201900 Sobic001G101700--Sobic007G209200 Sobic008G151600 Sobic008G151600 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G101700--Sobic001G143400 Sobic003G002000--Sobic006G274200 Sobic003G002000--Sobic007G209200 Sobic003G002000--Sobic006G163300 Sobic003G002000--Sobic003G019900 Sobic003G002000--Sobic003G010700 Sobic003G002000--Sobic001G101900 Sobic003G002000--Sobic008G138000 Sobic010G269700 Sobic010G269700 Sobic003G002000--Sobic010G269700 Sobic003G002000--Sobic007G147200 Sobic003G338700 Sobic003G338700 Sobic010G077000--Sobic003G338700 Sobic010G014500 Sobic010G014500 Sobic010G077000--Sobic010G014500 Sobic010G077000--Sobic003G019900 Sobic010G077000--Sobic004G003700 Sobic010G077000--Sobic006G163300 Sobic001G379900 Sobic001G379900 Sobic010G077000--Sobic001G379900 Sobic001G493900 Sobic001G493900 Sobic010G077000--Sobic001G493900 Sobic010G077000--Sobic003G010700 Sobic010G077000--Sobic007G147200
Octagon: transcription factors


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