Gene annotation
Transcriptome id Sobic.010G276600.1
Synonym Sb10g031030, AGO1
Functional annotation PAZ domain containing protein, putative, expressed
UniProt A0A194YLW3
Pfam PF16487 PF12764 PF16488 PF08699 PF16486 PF02170 PF02171
Panther DB PTHR22891 PTHR22891:SF57
NCBI CDD -
KEGG Orthology K11593; ELF2C, eukaryotic translation initiation factor 2C
Gene Ontology GO:0005515; protein binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT1G48410 : Stabilizer of iron transporter SufD / Polynucleotidyl transferase
RAP-DB (Rice) LOC_Os06g51310.2 : PAZ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a018569
Brachypodium KQJ84078 , PNT61672 , KQK16625 , KQK02165 , KQK02166 , KQK02167
Barley HORVU7Hr1G120600.2 , HORVU7Hr1G120600.4 , HORVU7Hr1G120600.9 , HORVU7Hr1G120600.3 , HORVU7Hr1G120600.1 , HORVU7Hr1G120600.6 , HORVU7Hr1G120600.7 , HORVU7Hr1G120600.5 , HORVU7Hr1G120600.18 , HORVU7Hr1G120600.19 , HORVU7Hr1G120600.10 , HORVU7Hr1G120600.11 , HORVU7Hr1G120600.13 , HORVU7Hr1G120600.15 , HORVU7Hr1G120600.16 , HORVU7Hr1G120600.17 , HORVU7Hr1G120600.24 , HORVU7Hr1G120600.21 , HORVU7Hr1G120600.20 , HORVU7Hr1G120600.23 , HORVU7Hr1G120600.22
Wheat TraesCS7D02G553000 , TraesCS7B02G482100 , TraesCS6D02G403900 , TraesCS7A02G557400 , TraesCSU02G081900 , TraesCSU02G081900 , TraesCS6B02G466700
Populus PNT09284 , PNT09283


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
2 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.006G273600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
5 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
6 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
8 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
9 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
10 Sobic.002G363300 - -
11 Sobic.010G247000 expressed protein -
12 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
13 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
14 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
15 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
16 Sobic.010G014500 aspartic protease, putative, expressed -
17 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
18 Sobic.005G168400 expressed protein -
19 Sobic.002G360600 expressed protein -
20 Sobic.008G138000 XH domain containing protein, expressed -


Gene co-expression network
sample Sobic010G276600 Sobic010G276600 Sobic003G010700 Sobic003G010700 Sobic010G276600--Sobic003G010700 Sobic010G168700 Sobic010G168700 Sobic010G276600--Sobic010G168700 Sobic006G273600 Sobic006G273600 Sobic010G276600--Sobic006G273600 Sobic005G199700 Sobic005G199700 Sobic010G276600--Sobic005G199700 Sobic007G170100 Sobic007G170100 Sobic010G276600--Sobic007G170100 Sobic003G338700 Sobic003G338700 Sobic010G276600--Sobic003G338700 Sobic001G379900 Sobic001G379900 Sobic010G276600--Sobic001G379900 Sobic006G163300 Sobic006G163300 Sobic010G276600--Sobic006G163300 Sobic001G286700 Sobic001G286700 Sobic010G276600--Sobic001G286700 Sobic002G363300 Sobic002G363300 Sobic003G010700--Sobic002G363300 Sobic003G010700--Sobic006G273600 Sobic003G010700--Sobic007G170100 Sobic003G010700--Sobic006G163300 Sobic003G010700--Sobic005G199700 Sobic002G360600 Sobic002G360600 Sobic003G010700--Sobic002G360600 Sobic009G146700 Sobic009G146700 Sobic003G010700--Sobic009G146700 Sobic003G010700--Sobic003G338700 Sobic003G010700--Sobic010G276600 Sobic009G047500 Sobic009G047500 Sobic010G168700--Sobic009G047500 Sobic001G143400 Sobic001G143400 Sobic010G168700--Sobic001G143400 Sobic005G168400 Sobic005G168400 Sobic010G168700--Sobic005G168400 Sobic004G003700 Sobic004G003700 Sobic010G168700--Sobic004G003700 Sobic010G070900 Sobic010G070900 Sobic010G168700--Sobic010G070900 Sobic010G168700--Sobic005G199700 Sobic010G168700--Sobic010G276600 Sobic002G426000 Sobic002G426000 Sobic010G168700--Sobic002G426000 Sobic010G168700--Sobic006G273600 Sobic006G273600--Sobic007G170100 Sobic005G009600 Sobic005G009600 Sobic006G273600--Sobic005G009600 Sobic006G273600--Sobic002G363300 Sobic006G273600--Sobic003G010700 Sobic010G235300 Sobic010G235300 Sobic006G273600--Sobic010G235300 Sobic006G273600--Sobic001G286700 Sobic006G273600--Sobic005G199700 Sobic003G027100 Sobic003G027100 Sobic006G273600--Sobic003G027100 Sobic010G166300 Sobic010G166300 Sobic006G273600--Sobic010G166300 Sobic005G199700--Sobic009G146700 Sobic005G199700--Sobic003G338700 Sobic005G199700--Sobic002G363300 Sobic007G180200 Sobic007G180200 Sobic005G199700--Sobic007G180200 Sobic005G199700--Sobic001G286700 Sobic005G199700--Sobic006G273600 Sobic005G199700--Sobic003G010700 Sobic005G199700--Sobic003G027100 Sobic010G014700 Sobic010G014700 Sobic005G199700--Sobic010G014700 Sobic007G170100--Sobic006G273600 Sobic007G170100--Sobic005G009600 Sobic007G170100--Sobic010G235300 Sobic007G170100--Sobic003G010700 Sobic007G170100--Sobic002G363300 Sobic007G170100--Sobic001G286700 Sobic007G165800 Sobic007G165800 Sobic007G170100--Sobic007G165800 Sobic007G170100--Sobic005G199700 Sobic007G170100--Sobic003G027100 Sobic003G338700--Sobic009G146700 Sobic003G338700--Sobic005G199700 Sobic010G014500 Sobic010G014500 Sobic003G338700--Sobic010G014500 Sobic003G338700--Sobic010G014700 Sobic003G338700--Sobic002G363300 Sobic003G338700--Sobic001G286700 Sobic003G338700--Sobic007G180200 Sobic001G199400 Sobic001G199400 Sobic003G338700--Sobic001G199400 Sobic003G019900 Sobic003G019900 Sobic003G338700--Sobic003G019900 Sobic001G379900--Sobic004G003700 Sobic010G077000 Sobic010G077000 Sobic001G379900--Sobic010G077000 Sobic001G379900--Sobic010G276600 Sobic006G221800 Sobic006G221800 Sobic001G379900--Sobic006G221800 Sobic001G493900 Sobic001G493900 Sobic001G379900--Sobic001G493900 Sobic001G379900--Sobic006G163300 Sobic001G379900--Sobic001G143400 Sobic001G379900--Sobic003G010700 Sobic003G307200 Sobic003G307200 Sobic001G379900--Sobic003G307200 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic003G046400 Sobic003G046400 Sobic006G163300--Sobic003G046400 Sobic006G163300--Sobic003G010700 Sobic006G163300--Sobic010G070900 Sobic007G147200 Sobic007G147200 Sobic006G163300--Sobic007G147200 Sobic007G033700 Sobic007G033700 Sobic006G163300--Sobic007G033700 Sobic006G107500 Sobic006G107500 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic001G286700--Sobic002G363300 Sobic004G211700 Sobic004G211700 Sobic001G286700--Sobic004G211700 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic001G286700--Sobic003G338700 Sobic001G286700--Sobic005G199700 Sobic001G286700--Sobic007G165800
Octagon: transcription factors


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