Gene annotation
Transcriptome id Sobic.006G273600.1
Synonym Sb06g033500
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YAP6
Pfam -
Panther DB PTHR33177 PTHR33177:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11600 : -
RAP-DB (Rice) LOC_Os04g58790.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ83605 , KQJ85375
Barley HORVU2Hr1G089140.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
2 Sobic.005G009600 pectinesterase, putative, expressed K01051: pectinesterase
3 Sobic.002G363300 - -
4 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
5 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
6 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
7 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
8 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
9 Sobic.010G166300 expressed protein -
10 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.009G023900 homeobox domain containing protein, expressed -
12 Sobic.010G276600 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
13 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
14 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
16 Sobic.001G473500 domain of unknown function DUF966 domain containing protein, expressed -
17 Sobic.004G211700 - -
18 Sobic.007G180200 NC domain-containing protein, putative, expressed -
19 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
20 Sobic.002G312300 SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -


Gene co-expression network
sample Sobic006G273600 Sobic006G273600 Sobic007G170100 Sobic007G170100 Sobic006G273600--Sobic007G170100 Sobic005G009600 Sobic005G009600 Sobic006G273600--Sobic005G009600 Sobic002G363300 Sobic002G363300 Sobic006G273600--Sobic002G363300 Sobic003G010700 Sobic003G010700 Sobic006G273600--Sobic003G010700 Sobic010G235300 Sobic010G235300 Sobic006G273600--Sobic010G235300 Sobic001G286700 Sobic001G286700 Sobic006G273600--Sobic001G286700 Sobic005G199700 Sobic005G199700 Sobic006G273600--Sobic005G199700 Sobic003G027100 Sobic003G027100 Sobic006G273600--Sobic003G027100 Sobic010G166300 Sobic010G166300 Sobic006G273600--Sobic010G166300 Sobic007G170100--Sobic006G273600 Sobic007G170100--Sobic005G009600 Sobic007G170100--Sobic010G235300 Sobic007G170100--Sobic003G010700 Sobic007G170100--Sobic002G363300 Sobic007G170100--Sobic001G286700 Sobic007G165800 Sobic007G165800 Sobic007G170100--Sobic007G165800 Sobic007G170100--Sobic005G199700 Sobic007G170100--Sobic003G027100 Sobic005G009600--Sobic006G273600 Sobic005G009600--Sobic010G166300 Sobic005G009600--Sobic007G170100 Sobic009G023900 Sobic009G023900 Sobic005G009600--Sobic009G023900 Sobic005G009600--Sobic010G235300 Sobic005G009600--Sobic002G363300 Sobic005G009600--Sobic001G286700 Sobic005G009600--Sobic003G027100 Sobic003G178500 Sobic003G178500 Sobic005G009600--Sobic003G178500 Sobic002G363300--Sobic006G273600 Sobic002G363300--Sobic005G199700 Sobic009G146700 Sobic009G146700 Sobic002G363300--Sobic009G146700 Sobic002G363300--Sobic003G010700 Sobic002G363300--Sobic003G027100 Sobic003G338700 Sobic003G338700 Sobic002G363300--Sobic003G338700 Sobic002G363300--Sobic001G286700 Sobic002G363300--Sobic005G009600 Sobic002G363300--Sobic007G170100 Sobic003G010700--Sobic002G363300 Sobic003G010700--Sobic006G273600 Sobic003G010700--Sobic007G170100 Sobic006G163300 Sobic006G163300 Sobic003G010700--Sobic006G163300 Sobic003G010700--Sobic005G199700 Sobic002G360600 Sobic002G360600 Sobic003G010700--Sobic002G360600 Sobic003G010700--Sobic009G146700 Sobic003G010700--Sobic003G338700 Sobic010G276600 Sobic010G276600 Sobic003G010700--Sobic010G276600 Sobic010G235300--Sobic001G286700 Sobic010G235300--Sobic005G009600 Sobic010G235300--Sobic006G273600 Sobic010G235300--Sobic003G027100 Sobic010G235300--Sobic007G170100 Sobic010G235300--Sobic007G165800 Sobic010G235300--Sobic010G166300 Sobic010G235300--Sobic003G178500 Sobic010G235300--Sobic002G363300 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic001G286700--Sobic002G363300 Sobic004G211700 Sobic004G211700 Sobic001G286700--Sobic004G211700 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic001G286700--Sobic003G338700 Sobic001G286700--Sobic005G199700 Sobic001G286700--Sobic007G165800 Sobic005G199700--Sobic009G146700 Sobic005G199700--Sobic003G338700 Sobic005G199700--Sobic002G363300 Sobic007G180200 Sobic007G180200 Sobic005G199700--Sobic007G180200 Sobic005G199700--Sobic001G286700 Sobic005G199700--Sobic006G273600 Sobic005G199700--Sobic003G010700 Sobic005G199700--Sobic003G027100 Sobic010G014700 Sobic010G014700 Sobic005G199700--Sobic010G014700 Sobic003G027100--Sobic003G178500 Sobic003G027100--Sobic002G363300 Sobic003G027100--Sobic001G286700 Sobic003G027100--Sobic010G235300 Sobic003G027100--Sobic004G211700 Sobic003G027100--Sobic010G166300 Sobic003G027100--Sobic007G165800 Sobic005G034500 Sobic005G034500 Sobic003G027100--Sobic005G034500 Sobic002G312300 Sobic002G312300 Sobic003G027100--Sobic002G312300 Sobic010G166300--Sobic009G023900 Sobic010G166300--Sobic005G009600 Sobic010G166300--Sobic003G178500 Sobic007G076100 Sobic007G076100 Sobic010G166300--Sobic007G076100 Sobic001G341700 Sobic001G341700 Sobic010G166300--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic010G166300--Sobic002G312200 Sobic010G166300--Sobic002G312300 Sobic010G166300--Sobic003G027100 Sobic005G218000 Sobic005G218000 Sobic010G166300--Sobic005G218000
Octagon: transcription factors


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