Gene annotation
Transcriptome id Sobic.006G274200.1
Synonym Sb06g033560
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Eukaryotic aspartyl protease domain containing protein, expressed
UniProt C5YAZ3
Pfam PF14543
Panther DB PTHR13683 PTHR13683:SF225
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT3G52500 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os04g58840.1 : Eukaryotic aspartyl protease domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009233
Brachypodium PNT62171
Barley HORVU0Hr1G005860.5 , HORVU0Hr1G005860.4 , HORVU0Hr1G005860.3 , HORVU0Hr1G005860.2 , HORVU0Hr1G005860.1
Wheat -
Populus -


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cDNA sequences
Sobic.006G274200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.010G269700 expressed protein -
3 Sobic.003G002000 expressed protein -
4 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
5 Sobic.001G101900 SCP-like extracellular protein, expressed -
6 Sobic.008G151600 PMR5, putative, expressed -
7 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
8 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.001G493900 beta-galactosidase, putative, expressed -
10 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
11 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
12 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
13 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
14 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
15 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
16 Sobic.002G360600 expressed protein -
17 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.008G114900 rhoGAP domain containing protein, expressed -
19 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
20 Sobic.003G373900 universal stress protein domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G274200 Sobic006G274200 Sobic003G019900 Sobic003G019900 Sobic006G274200--Sobic003G019900 Sobic010G269700 Sobic010G269700 Sobic006G274200--Sobic010G269700 Sobic003G002000 Sobic003G002000 Sobic006G274200--Sobic003G002000 Sobic007G209200 Sobic007G209200 Sobic006G274200--Sobic007G209200 Sobic001G101900 Sobic001G101900 Sobic006G274200--Sobic001G101900 Sobic008G151600 Sobic008G151600 Sobic006G274200--Sobic008G151600 Sobic009G146700 Sobic009G146700 Sobic006G274200--Sobic009G146700 Sobic003G338700 Sobic003G338700 Sobic006G274200--Sobic003G338700 Sobic001G493900 Sobic001G493900 Sobic006G274200--Sobic001G493900 Sobic003G019900--Sobic006G274200 Sobic003G019900--Sobic001G493900 Sobic003G019900--Sobic003G338700 Sobic003G019900--Sobic008G151600 Sobic007G147200 Sobic007G147200 Sobic003G019900--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic003G019900--Sobic010G014500 Sobic006G163300 Sobic006G163300 Sobic003G019900--Sobic006G163300 Sobic001G074000 Sobic001G074000 Sobic003G019900--Sobic001G074000 Sobic004G267600 Sobic004G267600 Sobic003G019900--Sobic004G267600 Sobic010G269700--Sobic006G274200 Sobic010G269700--Sobic003G019900 Sobic002G222500 Sobic002G222500 Sobic010G269700--Sobic002G222500 Sobic003G373900 Sobic003G373900 Sobic010G269700--Sobic003G373900 Sobic010G092400 Sobic010G092400 Sobic010G269700--Sobic010G092400 Sobic010G086000 Sobic010G086000 Sobic010G269700--Sobic010G086000 Sobic010G269700--Sobic003G002000 Sobic005G020100 Sobic005G020100 Sobic010G269700--Sobic005G020100 Sobic010G241100 Sobic010G241100 Sobic010G269700--Sobic010G241100 Sobic003G002000--Sobic006G274200 Sobic003G002000--Sobic007G209200 Sobic003G002000--Sobic006G163300 Sobic003G002000--Sobic003G019900 Sobic003G010700 Sobic003G010700 Sobic003G002000--Sobic003G010700 Sobic003G002000--Sobic001G101900 Sobic008G138000 Sobic008G138000 Sobic003G002000--Sobic008G138000 Sobic003G002000--Sobic010G269700 Sobic003G002000--Sobic007G147200 Sobic007G209200--Sobic008G138000 Sobic004G003700 Sobic004G003700 Sobic007G209200--Sobic004G003700 Sobic007G209200--Sobic003G002000 Sobic001G496400 Sobic001G496400 Sobic007G209200--Sobic001G496400 Sobic007G209200--Sobic006G274200 Sobic009G208300 Sobic009G208300 Sobic007G209200--Sobic009G208300 Sobic001G143400 Sobic001G143400 Sobic007G209200--Sobic001G143400 Sobic001G101700 Sobic001G101700 Sobic007G209200--Sobic001G101700 Sobic007G209200--Sobic007G147200 Sobic001G101900--Sobic006G163300 Sobic001G101900--Sobic007G147200 Sobic001G101900--Sobic006G274200 Sobic010G070900 Sobic010G070900 Sobic001G101900--Sobic010G070900 Sobic001G101900--Sobic003G019900 Sobic002G360600 Sobic002G360600 Sobic001G101900--Sobic002G360600 Sobic001G101900--Sobic004G003700 Sobic009G087700 Sobic009G087700 Sobic001G101900--Sobic009G087700 Sobic001G101900--Sobic003G002000 Sobic008G151600--Sobic003G019900 Sobic006G221800 Sobic006G221800 Sobic008G151600--Sobic006G221800 Sobic008G151600--Sobic006G274200 Sobic008G151600--Sobic001G493900 Sobic008G151600--Sobic001G101700 Sobic010G077000 Sobic010G077000 Sobic008G151600--Sobic010G077000 Sobic007G161600 Sobic007G161600 Sobic008G151600--Sobic007G161600 Sobic005G032600 Sobic005G032600 Sobic008G151600--Sobic005G032600 Sobic008G151600--Sobic007G147200 Sobic005G199700 Sobic005G199700 Sobic009G146700--Sobic005G199700 Sobic009G146700--Sobic003G338700 Sobic002G363300 Sobic002G363300 Sobic009G146700--Sobic002G363300 Sobic010G014700 Sobic010G014700 Sobic009G146700--Sobic010G014700 Sobic009G146700--Sobic003G010700 Sobic001G286700 Sobic001G286700 Sobic009G146700--Sobic001G286700 Sobic007G180200 Sobic007G180200 Sobic009G146700--Sobic007G180200 Sobic006G107500 Sobic006G107500 Sobic009G146700--Sobic006G107500 Sobic009G146700--Sobic010G014500 Sobic003G338700--Sobic009G146700 Sobic003G338700--Sobic005G199700 Sobic003G338700--Sobic010G014500 Sobic003G338700--Sobic010G014700 Sobic003G338700--Sobic002G363300 Sobic003G338700--Sobic001G286700 Sobic003G338700--Sobic007G180200 Sobic001G199400 Sobic001G199400 Sobic003G338700--Sobic001G199400 Sobic003G338700--Sobic003G019900 Sobic001G493900--Sobic004G267600 Sobic001G493900--Sobic003G019900 Sobic010G129700 Sobic010G129700 Sobic001G493900--Sobic010G129700 Sobic002G319300 Sobic002G319300 Sobic001G493900--Sobic002G319300 Sobic008G114900 Sobic008G114900 Sobic001G493900--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic001G493900--Sobic001G155700 Sobic010G192500 Sobic010G192500 Sobic001G493900--Sobic010G192500 Sobic002G417000 Sobic002G417000 Sobic001G493900--Sobic002G417000 Sobic001G493900--Sobic003G338700
Octagon: transcription factors


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