Gene annotation
Transcriptome id Sobic.007G116800.1
Synonym Sb07g019310, PG2
Functional annotation BURP domain containing protein, expressed
UniProt C5YKK7
Pfam PF03181
Panther DB PTHR31458 PTHR31458:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70370 : polygalacturonase 2
RAP-DB (Rice) LOC_Os08g29200.1 : BURP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046535 , Zm00025a030958
Brachypodium PNT64409 , KQJ98109
Barley HORVU7Hr1G019680.3 , HORVU7Hr1G019680.1 , HORVU6Hr1G002600.1 , HORVU6Hr1G002600.2 , HORVU4Hr1G017600.1 , HORVU7Hr1G019590.1 , HORVU7Hr1G019680.2
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.007G116800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G087800 expressed protein K06085: SSX2IP, synovial sarcoma, X breakpoint 2 interacting protein
2 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
3 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
4 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
5 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
6 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.008G114900 rhoGAP domain containing protein, expressed -
8 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
9 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
10 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
11 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
12 Sobic.001G493900 beta-galactosidase, putative, expressed -
13 Sobic.003G031700 protein kinase family protein, putative, expressed -
14 Sobic.003G102000 expressed protein -
15 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
16 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
17 Sobic.004G246500 ATMAP70 protein, putative, expressed -
18 Sobic.001G398400 expressed protein -
19 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
20 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic007G116800 Sobic007G116800 Sobic007G087800 Sobic007G087800 Sobic007G116800--Sobic007G087800 Sobic010G129700 Sobic010G129700 Sobic007G116800--Sobic010G129700 Sobic001G522300 Sobic001G522300 Sobic007G116800--Sobic001G522300 Sobic003G260700 Sobic003G260700 Sobic007G116800--Sobic003G260700 Sobic002G313000 Sobic002G313000 Sobic007G116800--Sobic002G313000 Sobic010G092400 Sobic010G092400 Sobic007G116800--Sobic010G092400 Sobic008G114900 Sobic008G114900 Sobic007G116800--Sobic008G114900 Sobic009G184200 Sobic009G184200 Sobic007G116800--Sobic009G184200 Sobic004G257600 Sobic004G257600 Sobic007G116800--Sobic004G257600 Sobic007G087800--Sobic007G116800 Sobic007G087800--Sobic010G092400 Sobic004G246500 Sobic004G246500 Sobic007G087800--Sobic004G246500 Sobic002G074000 Sobic002G074000 Sobic007G087800--Sobic002G074000 Sobic003G031700 Sobic003G031700 Sobic007G087800--Sobic003G031700 Sobic001G493900 Sobic001G493900 Sobic007G087800--Sobic001G493900 Sobic007G087800--Sobic010G129700 Sobic004G267600 Sobic004G267600 Sobic007G087800--Sobic004G267600 Sobic006G014400 Sobic006G014400 Sobic007G087800--Sobic006G014400 Sobic010G129700--Sobic002G313000 Sobic010G129700--Sobic009G184200 Sobic001G398400 Sobic001G398400 Sobic010G129700--Sobic001G398400 Sobic010G129700--Sobic003G260700 Sobic010G129700--Sobic001G493900 Sobic010G129700--Sobic008G114900 Sobic010G129700--Sobic004G267600 Sobic010G129700--Sobic007G116800 Sobic008G006800 Sobic008G006800 Sobic010G129700--Sobic008G006800 Sobic001G074000 Sobic001G074000 Sobic001G522300--Sobic001G074000 Sobic001G522300--Sobic007G116800 Sobic001G522300--Sobic001G493900 Sobic001G522300--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G522300--Sobic002G362700 Sobic001G286400 Sobic001G286400 Sobic001G522300--Sobic001G286400 Sobic009G235700 Sobic009G235700 Sobic001G522300--Sobic009G235700 Sobic009G129700 Sobic009G129700 Sobic001G522300--Sobic009G129700 Sobic004G283800 Sobic004G283800 Sobic001G522300--Sobic004G283800 Sobic001G170800 Sobic001G170800 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic004G339500 Sobic004G339500 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic004G198100 Sobic004G198100 Sobic003G260700--Sobic004G198100 Sobic004G271300 Sobic004G271300 Sobic003G260700--Sobic004G271300 Sobic003G260700--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic002G313000--Sobic010G129700 Sobic002G313000--Sobic003G260700 Sobic002G313000--Sobic008G114900 Sobic002G313000--Sobic008G006800 Sobic008G125700 Sobic008G125700 Sobic002G313000--Sobic008G125700 Sobic001G140600 Sobic001G140600 Sobic002G313000--Sobic001G140600 Sobic002G319300 Sobic002G319300 Sobic002G313000--Sobic002G319300 Sobic002G313000--Sobic001G170800 Sobic002G313000--Sobic001G398400 Sobic010G092400--Sobic007G116800 Sobic005G062600 Sobic005G062600 Sobic010G092400--Sobic005G062600 Sobic003G085900 Sobic003G085900 Sobic010G092400--Sobic003G085900 Sobic007G007800 Sobic007G007800 Sobic010G092400--Sobic007G007800 Sobic010G092400--Sobic009G184200 Sobic010G269700 Sobic010G269700 Sobic010G092400--Sobic010G269700 Sobic010G092400--Sobic007G087800 Sobic003G387700 Sobic003G387700 Sobic010G092400--Sobic003G387700 Sobic008G070700 Sobic008G070700 Sobic010G092400--Sobic008G070700 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic001G155700 Sobic001G155700 Sobic008G114900--Sobic001G155700 Sobic010G119300 Sobic010G119300 Sobic008G114900--Sobic010G119300 Sobic006G219500 Sobic006G219500 Sobic008G114900--Sobic006G219500 Sobic008G114900--Sobic002G319300 Sobic008G114900--Sobic003G260700 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic002G204400 Sobic002G204400 Sobic009G184200--Sobic002G204400 Sobic010G105400 Sobic010G105400 Sobic009G184200--Sobic010G105400 Sobic009G184200--Sobic001G398400 Sobic003G393100 Sobic003G393100 Sobic009G184200--Sobic003G393100 Sobic009G184200--Sobic010G129700 Sobic003G032200 Sobic003G032200 Sobic009G184200--Sobic003G032200 Sobic009G184200--Sobic001G170800 Sobic009G184200--Sobic007G007800 Sobic009G184200--Sobic003G260700 Sobic004G257600--Sobic003G260700 Sobic004G257600--Sobic003G387700 Sobic004G257600--Sobic001G398400 Sobic004G257600--Sobic001G177900 Sobic004G257600--Sobic004G198100 Sobic004G257600--Sobic001G170800 Sobic003G444100 Sobic003G444100 Sobic004G257600--Sobic003G444100 Sobic007G168900 Sobic007G168900 Sobic004G257600--Sobic007G168900 Sobic004G257600--Sobic004G339500
Octagon: transcription factors


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