Gene annotation
Transcriptome id Sobic.006G138900.2
Synonym Sb06g021830
Functional annotation expressed protein
UniProt A0A1Z5REM6
Pfam -
Panther DB PTHR34287 PTHR34287:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15140 : -
RAP-DB (Rice) LOC_Os04g42540.1 : expressed protein
MaizeGDB (Corn) Zm00025a010762
Brachypodium KQJ83435
Barley HORVU2Hr1G087070.1 , HORVU2Hr1G087070.2 , HORVU2Hr1G087070.3
Wheat TraesCS2B02G377700 , TraesCS2D02G357100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G227200 expressed protein -
2 Sobic.003G387700 expressed protein -
3 Sobic.009G157600 DUF740 domain containing protein, expressed -
4 Sobic.002G162300 expressed protein K11270: chromosome transmission fidelity protein 8
5 Sobic.009G120700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
6 Sobic.001G091500 expressed protein -
7 Sobic.006G134200 expressed protein -
8 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
10 Sobic.005G140001 - K08235: xyloglucan:xyloglucosyl transferase
11 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
12 Sobic.001G255600 endonuclease/Exonuclease/phosphatase family protein, expressed -
13 Sobic.007G017700 IQ calmodulin-binding motif domain containing protein, expressed -
14 Sobic.001G289900 AT hook motif domain containing protein, expressed -
15 Sobic.004G279601 - K11254: histone H4
16 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
17 Sobic.001G230300 shugoshin-1, putative, expressed -
18 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
19 Sobic.004G285900 HMG1/2, putative, expressed -
20 Sobic.002G230800 expressed protein -


Gene co-expression network
sample Sobic006G138900 Sobic006G138900 Sobic010G227200 Sobic010G227200 Sobic006G138900--Sobic010G227200 Sobic003G387700 Sobic003G387700 Sobic006G138900--Sobic003G387700 Sobic009G157600 Sobic009G157600 Sobic006G138900--Sobic009G157600 Sobic002G162300 Sobic002G162300 Sobic006G138900--Sobic002G162300 Sobic009G120700 Sobic009G120700 Sobic006G138900--Sobic009G120700 Sobic001G091500 Sobic001G091500 Sobic006G138900--Sobic001G091500 Sobic006G134200 Sobic006G134200 Sobic006G138900--Sobic006G134200 Sobic002G426800 Sobic002G426800 Sobic006G138900--Sobic002G426800 Sobic003G328500 Sobic003G328500 Sobic006G138900--Sobic003G328500 Sobic010G227200--Sobic006G138900 Sobic010G227200--Sobic009G157600 Sobic002G392500 Sobic002G392500 Sobic010G227200--Sobic002G392500 Sobic006G124400 Sobic006G124400 Sobic010G227200--Sobic006G124400 Sobic005G129700 Sobic005G129700 Sobic010G227200--Sobic005G129700 Sobic001G255600 Sobic001G255600 Sobic010G227200--Sobic001G255600 Sobic004G273000 Sobic004G273000 Sobic010G227200--Sobic004G273000 Sobic002G230800 Sobic002G230800 Sobic010G227200--Sobic002G230800 Sobic001G289900 Sobic001G289900 Sobic010G227200--Sobic001G289900 Sobic004G257600 Sobic004G257600 Sobic003G387700--Sobic004G257600 Sobic003G387700--Sobic006G134200 Sobic010G105400 Sobic010G105400 Sobic003G387700--Sobic010G105400 Sobic003G387700--Sobic001G091500 Sobic001G105800 Sobic001G105800 Sobic003G387700--Sobic001G105800 Sobic010G119300 Sobic010G119300 Sobic003G387700--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic003G387700--Sobic001G398400 Sobic003G387700--Sobic003G328500 Sobic007G100600 Sobic007G100600 Sobic003G387700--Sobic007G100600 Sobic009G157600--Sobic010G227200 Sobic004G047100 Sobic004G047100 Sobic009G157600--Sobic004G047100 Sobic009G157600--Sobic002G230800 Sobic003G107200 Sobic003G107200 Sobic009G157600--Sobic003G107200 Sobic009G157600--Sobic006G138900 Sobic006G081800 Sobic006G081800 Sobic009G157600--Sobic006G081800 Sobic009G157600--Sobic001G255600 Sobic009G157600--Sobic001G091500 Sobic009G157600--Sobic009G120700 Sobic001G078600 Sobic001G078600 Sobic002G162300--Sobic001G078600 Sobic004G285900 Sobic004G285900 Sobic002G162300--Sobic004G285900 Sobic002G162300--Sobic006G081800 Sobic006G102900 Sobic006G102900 Sobic002G162300--Sobic006G102900 Sobic002G162300--Sobic006G138900 Sobic002G162300--Sobic009G120700 Sobic001G261549 Sobic001G261549 Sobic002G162300--Sobic001G261549 Sobic001G401600 Sobic001G401600 Sobic002G162300--Sobic001G401600 Sobic004G279601 Sobic004G279601 Sobic002G162300--Sobic004G279601 Sobic009G120700--Sobic001G091500 Sobic009G120700--Sobic010G119300 Sobic003G102000 Sobic003G102000 Sobic009G120700--Sobic003G102000 Sobic009G120700--Sobic003G328500 Sobic009G120700--Sobic003G387700 Sobic009G120700--Sobic002G426800 Sobic009G120700--Sobic007G100600 Sobic001G230300 Sobic001G230300 Sobic009G120700--Sobic001G230300 Sobic007G132900 Sobic007G132900 Sobic009G120700--Sobic007G132900 Sobic001G091500--Sobic002G426800 Sobic001G091500--Sobic003G387700 Sobic001G091500--Sobic009G120700 Sobic003G260700 Sobic003G260700 Sobic001G091500--Sobic003G260700 Sobic001G091500--Sobic004G047100 Sobic002G222500 Sobic002G222500 Sobic001G091500--Sobic002G222500 Sobic004G339500 Sobic004G339500 Sobic001G091500--Sobic004G339500 Sobic001G091500--Sobic010G119300 Sobic004G198100 Sobic004G198100 Sobic001G091500--Sobic004G198100 Sobic006G134200--Sobic003G328500 Sobic006G134200--Sobic003G387700 Sobic007G207700 Sobic007G207700 Sobic006G134200--Sobic007G207700 Sobic006G134200--Sobic004G257600 Sobic006G134200--Sobic007G100600 Sobic001G075400 Sobic001G075400 Sobic006G134200--Sobic001G075400 Sobic001G177900 Sobic001G177900 Sobic006G134200--Sobic001G177900 Sobic006G134200--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic006G134200--Sobic005G144600 Sobic009G181500 Sobic009G181500 Sobic002G426800--Sobic009G181500 Sobic002G426800--Sobic001G091500 Sobic002G426800--Sobic005G144600 Sobic002G426800--Sobic004G047100 Sobic002G426800--Sobic003G260700 Sobic002G426800--Sobic001G078600 Sobic003G314900 Sobic003G314900 Sobic002G426800--Sobic003G314900 Sobic003G444100 Sobic003G444100 Sobic002G426800--Sobic003G444100 Sobic002G426800--Sobic010G105400 Sobic003G328500--Sobic006G134200 Sobic003G328500--Sobic001G177900 Sobic003G328500--Sobic001G075400 Sobic003G328500--Sobic007G207700 Sobic003G328500--Sobic003G387700 Sobic003G328500--Sobic004G257600 Sobic003G328500--Sobic003G260700 Sobic003G328500--Sobic005G144600 Sobic003G328500--Sobic002G426800
Octagon: transcription factors


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