Gene annotation
Transcriptome id Sobic.010G202100.1
Synonym Sb10g025010
Functional annotation expressed protein
UniProt C5Z6L7
Pfam PF00560 PF08263 PF13855 PF07714 PF00069
Panther DB PTHR27008 PTHR27008:SF42
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT4G37250 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os06g43170.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a051426 , Zm00025a045986
Brachypodium KQK16736
Barley HORVU7Hr1G116470.8 , HORVU7Hr1G116470.9 , HORVU7Hr1G116470.1 , HORVU7Hr1G116470.2 , HORVU7Hr1G116470.3 , HORVU7Hr1G116470.4 , HORVU7Hr1G116470.5 , HORVU7Hr1G116470.6 , HORVU7Hr1G116470.7 , HORVU3Hr1G109760.1 , HORVU3Hr1G109760.2 , HORVU3Hr1G109760.4 , HORVU3Hr1G109760.5
Wheat TraesCS3D02G502600 , TraesCS5B02G158000 , TraesCS7B02G441200 , TraesCS5D02G165400 , TraesCS7A02G523900 , TraesCS7D02G512900 , TraesCS5A02G160500
Populus -


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cDNA sequences
Sobic.010G202100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
2 Sobic.010G234800 expressed protein -
3 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
4 Sobic.007G017700 IQ calmodulin-binding motif domain containing protein, expressed -
5 Sobic.003G414400 expressed protein -
6 Sobic.009G025400 myosin heavy chain-related, putative, expressed -
7 Sobic.003G047200 expressed protein -
8 Sobic.006G201300 expressed protein -
9 Sobic.008G114500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
10 Sobic.001G140600 expressed protein -
11 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
12 Sobic.002G293800 expressed protein -
13 Sobic.007G019600 expressed protein -
14 Sobic.009G195600 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
15 Sobic.001G244400 IQ calmodulin-binding motif family protein, putative, expressed -
16 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
17 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
18 Sobic.001G284900 expressed protein -
19 Sobic.005G056800 FHA domain containing protein, putative, expressed -
20 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic010G202100 Sobic010G202100 Sobic010G215300 Sobic010G215300 Sobic010G202100--Sobic010G215300 Sobic010G234800 Sobic010G234800 Sobic010G202100--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic010G202100--Sobic001G098900 Sobic007G017700 Sobic007G017700 Sobic010G202100--Sobic007G017700 Sobic003G414400 Sobic003G414400 Sobic010G202100--Sobic003G414400 Sobic009G025400 Sobic009G025400 Sobic010G202100--Sobic009G025400 Sobic003G047200 Sobic003G047200 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic008G114500 Sobic008G114500 Sobic010G202100--Sobic008G114500 Sobic010G215300--Sobic001G098900 Sobic010G215300--Sobic010G234800 Sobic010G215300--Sobic003G414400 Sobic010G215300--Sobic010G202100 Sobic001G140600 Sobic001G140600 Sobic010G215300--Sobic001G140600 Sobic010G215300--Sobic003G047200 Sobic010G215300--Sobic008G114500 Sobic001G540900 Sobic001G540900 Sobic010G215300--Sobic001G540900 Sobic001G284900 Sobic001G284900 Sobic010G215300--Sobic001G284900 Sobic010G234800--Sobic001G098900 Sobic010G234800--Sobic010G215300 Sobic010G234800--Sobic010G202100 Sobic010G234800--Sobic003G047200 Sobic010G234800--Sobic008G114500 Sobic002G293800 Sobic002G293800 Sobic010G234800--Sobic002G293800 Sobic010G234800--Sobic007G017700 Sobic010G234800--Sobic003G414400 Sobic010G234800--Sobic001G140600 Sobic001G098900--Sobic010G215300 Sobic001G098900--Sobic010G234800 Sobic001G098900--Sobic010G202100 Sobic001G244400 Sobic001G244400 Sobic001G098900--Sobic001G244400 Sobic001G098900--Sobic003G047200 Sobic001G098900--Sobic003G414400 Sobic001G098900--Sobic002G293800 Sobic001G098900--Sobic008G114500 Sobic006G155900 Sobic006G155900 Sobic001G098900--Sobic006G155900 Sobic003G387700 Sobic003G387700 Sobic007G017700--Sobic003G387700 Sobic002G289800 Sobic002G289800 Sobic007G017700--Sobic002G289800 Sobic007G207700 Sobic007G207700 Sobic007G017700--Sobic007G207700 Sobic007G017700--Sobic010G202100 Sobic006G134200 Sobic006G134200 Sobic007G017700--Sobic006G134200 Sobic007G017700--Sobic010G215300 Sobic001G091500 Sobic001G091500 Sobic007G017700--Sobic001G091500 Sobic007G017700--Sobic010G234800 Sobic007G017700--Sobic008G114500 Sobic003G414400--Sobic001G284900 Sobic003G414400--Sobic010G215300 Sobic003G414400--Sobic001G098900 Sobic003G414400--Sobic010G202100 Sobic003G414400--Sobic003G047200 Sobic003G414400--Sobic010G234800 Sobic003G414400--Sobic006G155900 Sobic001G070200 Sobic001G070200 Sobic003G414400--Sobic001G070200 Sobic004G271300 Sobic004G271300 Sobic003G414400--Sobic004G271300 Sobic005G056800 Sobic005G056800 Sobic009G025400--Sobic005G056800 Sobic009G025400--Sobic010G202100 Sobic004G108400 Sobic004G108400 Sobic009G025400--Sobic004G108400 Sobic002G394200 Sobic002G394200 Sobic009G025400--Sobic002G394200 Sobic009G257900 Sobic009G257900 Sobic009G025400--Sobic009G257900 Sobic006G112800 Sobic006G112800 Sobic009G025400--Sobic006G112800 Sobic009G025400--Sobic003G414400 Sobic009G025400--Sobic001G284900 Sobic003G083500 Sobic003G083500 Sobic009G025400--Sobic003G083500 Sobic003G047200--Sobic010G234800 Sobic003G047200--Sobic001G098900 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic006G201300--Sobic010G202100 Sobic006G201300--Sobic001G140600 Sobic006G201300--Sobic003G047200 Sobic006G201300--Sobic009G025400 Sobic005G168400 Sobic005G168400 Sobic006G201300--Sobic005G168400 Sobic006G201300--Sobic010G234800 Sobic006G201300--Sobic010G215300 Sobic006G201300--Sobic004G271300 Sobic002G313000 Sobic002G313000 Sobic006G201300--Sobic002G313000 Sobic008G114500--Sobic010G234800 Sobic008G114500--Sobic010G215300 Sobic004G205300 Sobic004G205300 Sobic008G114500--Sobic004G205300 Sobic008G114500--Sobic007G017700 Sobic008G114500--Sobic001G098900 Sobic008G114500--Sobic010G202100 Sobic008G114500--Sobic002G293800 Sobic008G114500--Sobic003G414400 Sobic004G279601 Sobic004G279601 Sobic008G114500--Sobic004G279601
Octagon: transcription factors


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