Gene annotation
Transcriptome id Sobic.003G414400.1
Synonym Sb03g044840
Functional annotation expressed protein
UniProt C5XH22
Pfam -
Panther DB PTHR21567 PTHR21567:SF35
NCBI CDD KOG2933; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15830 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os01g70560.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK11364
Barley -
Wheat TraesCS3A02G449000 , TraesCS3B02G485700 , TraesCS3D02G441700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G284900 expressed protein -
2 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
3 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
4 Sobic.010G202100 expressed protein -
5 Sobic.003G047200 expressed protein -
6 Sobic.010G234800 expressed protein -
7 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
8 Sobic.001G070200 - -
9 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
10 Sobic.005G056800 FHA domain containing protein, putative, expressed -
11 Sobic.004G198200 expressed protein -
12 Sobic.001G427400 AAA-type ATPase family protein, putative, expressed K11269: CTF18, chromosome transmission fidelity protein 18
13 Sobic.001G244400 IQ calmodulin-binding motif family protein, putative, expressed -
14 Sobic.008G114500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
15 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
16 Sobic.009G025400 myosin heavy chain-related, putative, expressed -
17 Sobic.002G293800 expressed protein -
18 Sobic.008G147500 cyclin, putative, expressed K18811: cyclin D5, plant
19 Sobic.001G140600 expressed protein -
20 Sobic.007G017700 IQ calmodulin-binding motif domain containing protein, expressed -


Gene co-expression network
sample Sobic003G414400 Sobic003G414400 Sobic001G284900 Sobic001G284900 Sobic003G414400--Sobic001G284900 Sobic010G215300 Sobic010G215300 Sobic003G414400--Sobic010G215300 Sobic001G098900 Sobic001G098900 Sobic003G414400--Sobic001G098900 Sobic010G202100 Sobic010G202100 Sobic003G414400--Sobic010G202100 Sobic003G047200 Sobic003G047200 Sobic003G414400--Sobic003G047200 Sobic010G234800 Sobic010G234800 Sobic003G414400--Sobic010G234800 Sobic006G155900 Sobic006G155900 Sobic003G414400--Sobic006G155900 Sobic001G070200 Sobic001G070200 Sobic003G414400--Sobic001G070200 Sobic004G271300 Sobic004G271300 Sobic003G414400--Sobic004G271300 Sobic001G284900--Sobic003G414400 Sobic005G056800 Sobic005G056800 Sobic001G284900--Sobic005G056800 Sobic001G284900--Sobic003G047200 Sobic001G284900--Sobic010G215300 Sobic001G284900--Sobic004G271300 Sobic009G025400 Sobic009G025400 Sobic001G284900--Sobic009G025400 Sobic001G427400 Sobic001G427400 Sobic001G284900--Sobic001G427400 Sobic010G017400 Sobic010G017400 Sobic001G284900--Sobic010G017400 Sobic001G284900--Sobic001G098900 Sobic010G215300--Sobic001G098900 Sobic010G215300--Sobic010G234800 Sobic010G215300--Sobic003G414400 Sobic010G215300--Sobic010G202100 Sobic001G140600 Sobic001G140600 Sobic010G215300--Sobic001G140600 Sobic010G215300--Sobic003G047200 Sobic008G114500 Sobic008G114500 Sobic010G215300--Sobic008G114500 Sobic001G540900 Sobic001G540900 Sobic010G215300--Sobic001G540900 Sobic010G215300--Sobic001G284900 Sobic001G098900--Sobic010G215300 Sobic001G098900--Sobic010G234800 Sobic001G098900--Sobic010G202100 Sobic001G244400 Sobic001G244400 Sobic001G098900--Sobic001G244400 Sobic001G098900--Sobic003G047200 Sobic001G098900--Sobic003G414400 Sobic002G293800 Sobic002G293800 Sobic001G098900--Sobic002G293800 Sobic001G098900--Sobic008G114500 Sobic001G098900--Sobic006G155900 Sobic010G202100--Sobic010G215300 Sobic010G202100--Sobic010G234800 Sobic010G202100--Sobic001G098900 Sobic007G017700 Sobic007G017700 Sobic010G202100--Sobic007G017700 Sobic010G202100--Sobic003G414400 Sobic010G202100--Sobic009G025400 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic010G202100--Sobic008G114500 Sobic003G047200--Sobic010G234800 Sobic003G047200--Sobic001G098900 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic010G234800--Sobic001G098900 Sobic010G234800--Sobic010G215300 Sobic010G234800--Sobic010G202100 Sobic010G234800--Sobic003G047200 Sobic010G234800--Sobic008G114500 Sobic010G234800--Sobic002G293800 Sobic010G234800--Sobic007G017700 Sobic010G234800--Sobic003G414400 Sobic010G234800--Sobic001G140600 Sobic009G190400 Sobic009G190400 Sobic006G155900--Sobic009G190400 Sobic004G198200 Sobic004G198200 Sobic006G155900--Sobic004G198200 Sobic003G040100 Sobic003G040100 Sobic006G155900--Sobic003G040100 Sobic001G494300 Sobic001G494300 Sobic006G155900--Sobic001G494300 Sobic008G020500 Sobic008G020500 Sobic006G155900--Sobic008G020500 Sobic006G155900--Sobic003G047200 Sobic006G155900--Sobic003G414400 Sobic006G155900--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic006G155900--Sobic001G331100 Sobic001G070200--Sobic004G198200 Sobic001G070200--Sobic006G155900 Sobic001G070200--Sobic003G414400 Sobic006G176400 Sobic006G176400 Sobic001G070200--Sobic006G176400 Sobic009G081400 Sobic009G081400 Sobic001G070200--Sobic009G081400 Sobic001G070200--Sobic010G215300 Sobic004G133000 Sobic004G133000 Sobic001G070200--Sobic004G133000 Sobic001G070200--Sobic008G020500 Sobic001G070200--Sobic009G190400 Sobic007G168900 Sobic007G168900 Sobic004G271300--Sobic007G168900 Sobic005G000500 Sobic005G000500 Sobic004G271300--Sobic005G000500 Sobic003G260700 Sobic003G260700 Sobic004G271300--Sobic003G260700 Sobic001G170800 Sobic001G170800 Sobic004G271300--Sobic001G170800 Sobic005G005700 Sobic005G005700 Sobic004G271300--Sobic005G005700 Sobic001G398400 Sobic001G398400 Sobic004G271300--Sobic001G398400 Sobic008G006800 Sobic008G006800 Sobic004G271300--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic004G271300--Sobic001G177900 Sobic005G144600 Sobic005G144600 Sobic004G271300--Sobic005G144600
Octagon: transcription factors


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