Gene annotation
Transcriptome id Sobic.004G198200.1,Sobic.004G198200.3,Sobic.004G198200.2
Synonym UVI4, PYM, Sb04g024490
Functional annotation expressed protein
UniProt C5XWE8
Pfam -
Panther DB PTHR35119
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42260 : uv-b-insensitive 4
RAP-DB (Rice) LOC_Os02g37850.2,LOC_Os02g37850.1 : expressed protein
MaizeGDB (Corn) Zm00025a021352
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G020500 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
2 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
3 Sobic.009G190400 expressed protein -
4 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
5 Sobic.001G070200 - -
6 Sobic.007G130000 STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.001G494300 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
8 Sobic.003G414400 expressed protein -
9 Sobic.001G427400 AAA-type ATPase family protein, putative, expressed K11269: CTF18, chromosome transmission fidelity protein 18
10 Sobic.001G284900 expressed protein -
11 Sobic.003G047200 expressed protein -
12 Sobic.001G331100 expressed protein -
13 Sobic.009G081400 expressed protein -
14 Sobic.005G056800 FHA domain containing protein, putative, expressed -
15 Sobic.003G415500 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
16 Sobic.008G147500 cyclin, putative, expressed K18811: cyclin D5, plant
17 Sobic.006G176400 ATROPGEF7/ROPGEF7, putative, expressed -
18 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
19 Sobic.004G133000 - -
20 Sobic.001G295400 protein kinase domain containing protein, expressed K02214: cell division control protein 7


Gene co-expression network
sample Sobic004G198200 Sobic004G198200 Sobic008G020500 Sobic008G020500 Sobic004G198200--Sobic008G020500 Sobic006G155900 Sobic006G155900 Sobic004G198200--Sobic006G155900 Sobic009G190400 Sobic009G190400 Sobic004G198200--Sobic009G190400 Sobic003G040100 Sobic003G040100 Sobic004G198200--Sobic003G040100 Sobic001G070200 Sobic001G070200 Sobic004G198200--Sobic001G070200 Sobic007G130000 Sobic007G130000 Sobic004G198200--Sobic007G130000 Sobic001G494300 Sobic001G494300 Sobic004G198200--Sobic001G494300 Sobic003G414400 Sobic003G414400 Sobic004G198200--Sobic003G414400 Sobic001G427400 Sobic001G427400 Sobic004G198200--Sobic001G427400 Sobic008G020500--Sobic004G198200 Sobic008G020500--Sobic003G040100 Sobic008G020500--Sobic006G155900 Sobic008G020500--Sobic001G494300 Sobic008G020500--Sobic009G190400 Sobic008G020500--Sobic007G130000 Sobic008G020500--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic008G020500--Sobic001G331100 Sobic004G156600 Sobic004G156600 Sobic008G020500--Sobic004G156600 Sobic006G155900--Sobic009G190400 Sobic006G155900--Sobic004G198200 Sobic006G155900--Sobic003G040100 Sobic006G155900--Sobic001G494300 Sobic006G155900--Sobic008G020500 Sobic003G047200 Sobic003G047200 Sobic006G155900--Sobic003G047200 Sobic006G155900--Sobic003G414400 Sobic006G155900--Sobic001G070200 Sobic006G155900--Sobic001G331100 Sobic009G190400--Sobic003G040100 Sobic009G190400--Sobic006G155900 Sobic009G190400--Sobic004G198200 Sobic009G064600 Sobic009G064600 Sobic009G190400--Sobic009G064600 Sobic003G415500 Sobic003G415500 Sobic009G190400--Sobic003G415500 Sobic009G190400--Sobic008G020500 Sobic002G282100 Sobic002G282100 Sobic009G190400--Sobic002G282100 Sobic009G190400--Sobic004G156600 Sobic009G190400--Sobic001G070200 Sobic003G040100--Sobic009G190400 Sobic003G040100--Sobic008G020500 Sobic003G040100--Sobic006G155900 Sobic003G040100--Sobic004G198200 Sobic003G040100--Sobic004G156600 Sobic003G040100--Sobic001G494300 Sobic003G390300 Sobic003G390300 Sobic003G040100--Sobic003G390300 Sobic003G040100--Sobic003G415500 Sobic004G061600 Sobic004G061600 Sobic003G040100--Sobic004G061600 Sobic001G070200--Sobic004G198200 Sobic001G070200--Sobic006G155900 Sobic001G070200--Sobic003G414400 Sobic006G176400 Sobic006G176400 Sobic001G070200--Sobic006G176400 Sobic009G081400 Sobic009G081400 Sobic001G070200--Sobic009G081400 Sobic010G215300 Sobic010G215300 Sobic001G070200--Sobic010G215300 Sobic004G133000 Sobic004G133000 Sobic001G070200--Sobic004G133000 Sobic001G070200--Sobic008G020500 Sobic001G070200--Sobic009G190400 Sobic007G130000--Sobic004G198200 Sobic007G130000--Sobic001G427400 Sobic007G130000--Sobic008G020500 Sobic005G056800 Sobic005G056800 Sobic007G130000--Sobic005G056800 Sobic007G130000--Sobic001G494300 Sobic007G130000--Sobic006G155900 Sobic007G130000--Sobic003G040100 Sobic002G380700 Sobic002G380700 Sobic007G130000--Sobic002G380700 Sobic001G284900 Sobic001G284900 Sobic007G130000--Sobic001G284900 Sobic001G494300--Sobic006G155900 Sobic001G494300--Sobic008G020500 Sobic001G494300--Sobic004G198200 Sobic001G494300--Sobic003G040100 Sobic007G019600 Sobic007G019600 Sobic001G494300--Sobic007G019600 Sobic001G494300--Sobic001G427400 Sobic001G494300--Sobic003G047200 Sobic009G163700 Sobic009G163700 Sobic001G494300--Sobic009G163700 Sobic001G494300--Sobic007G130000 Sobic003G414400--Sobic001G284900 Sobic003G414400--Sobic010G215300 Sobic001G098900 Sobic001G098900 Sobic003G414400--Sobic001G098900 Sobic010G202100 Sobic010G202100 Sobic003G414400--Sobic010G202100 Sobic003G414400--Sobic003G047200 Sobic010G234800 Sobic010G234800 Sobic003G414400--Sobic010G234800 Sobic003G414400--Sobic006G155900 Sobic003G414400--Sobic001G070200 Sobic004G271300 Sobic004G271300 Sobic003G414400--Sobic004G271300 Sobic008G147500 Sobic008G147500 Sobic001G427400--Sobic008G147500 Sobic001G427400--Sobic001G494300 Sobic001G427400--Sobic003G414400 Sobic001G427400--Sobic007G130000 Sobic001G427400--Sobic004G198200 Sobic001G427400--Sobic001G284900 Sobic001G295400 Sobic001G295400 Sobic001G427400--Sobic001G295400 Sobic006G112800 Sobic006G112800 Sobic001G427400--Sobic006G112800 Sobic010G067900 Sobic010G067900 Sobic001G427400--Sobic010G067900
Octagon: transcription factors


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