Gene annotation
Transcriptome id Sobic.006G155900.1
Synonym Sb06g023300
Functional annotation ulp1 protease family, C-terminal catalytic domain containing protein, expressed
UniProt C5YCJ5
Pfam -
Panther DB PTHR34367 PTHR34367:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65710 : -
RAP-DB (Rice) LOC_Os04g44640.1 : ulp1 protease family, C-terminal catalytic domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056559 , Zm00025a010476
Brachypodium KQK00488 , KQJ83712
Barley -
Wheat TraesCS2B02G391100 , TraesCS6D02G217400 , TraesCS2A02G373900 , TraesCS6A02G234800 , TraesCS2D02G370200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G190400 expressed protein -
2 Sobic.004G198200 expressed protein -
3 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
4 Sobic.001G494300 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
5 Sobic.008G020500 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
6 Sobic.003G047200 expressed protein -
7 Sobic.003G414400 expressed protein -
8 Sobic.001G070200 - -
9 Sobic.001G331100 expressed protein -
10 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
11 Sobic.009G064600 phototropic-responsive NPH3 family protein, putative, expressed -
12 Sobic.010G202100 expressed protein -
13 Sobic.007G019600 expressed protein -
14 Sobic.001G284900 expressed protein -
15 Sobic.001G244400 IQ calmodulin-binding motif family protein, putative, expressed -
16 Sobic.007G130000 STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
17 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
18 Sobic.005G056800 FHA domain containing protein, putative, expressed -
19 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
20 Sobic.004G237300 PCF-like (ClassI) Subclade 5 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP-domain protein, putative, expressed -


Gene co-expression network
sample Sobic006G155900 Sobic006G155900 Sobic009G190400 Sobic009G190400 Sobic006G155900--Sobic009G190400 Sobic004G198200 Sobic004G198200 Sobic006G155900--Sobic004G198200 Sobic003G040100 Sobic003G040100 Sobic006G155900--Sobic003G040100 Sobic001G494300 Sobic001G494300 Sobic006G155900--Sobic001G494300 Sobic008G020500 Sobic008G020500 Sobic006G155900--Sobic008G020500 Sobic003G047200 Sobic003G047200 Sobic006G155900--Sobic003G047200 Sobic003G414400 Sobic003G414400 Sobic006G155900--Sobic003G414400 Sobic001G070200 Sobic001G070200 Sobic006G155900--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic006G155900--Sobic001G331100 Sobic009G190400--Sobic003G040100 Sobic009G190400--Sobic006G155900 Sobic009G190400--Sobic004G198200 Sobic009G064600 Sobic009G064600 Sobic009G190400--Sobic009G064600 Sobic003G415500 Sobic003G415500 Sobic009G190400--Sobic003G415500 Sobic009G190400--Sobic008G020500 Sobic002G282100 Sobic002G282100 Sobic009G190400--Sobic002G282100 Sobic004G156600 Sobic004G156600 Sobic009G190400--Sobic004G156600 Sobic009G190400--Sobic001G070200 Sobic004G198200--Sobic008G020500 Sobic004G198200--Sobic006G155900 Sobic004G198200--Sobic009G190400 Sobic004G198200--Sobic003G040100 Sobic004G198200--Sobic001G070200 Sobic007G130000 Sobic007G130000 Sobic004G198200--Sobic007G130000 Sobic004G198200--Sobic001G494300 Sobic004G198200--Sobic003G414400 Sobic001G427400 Sobic001G427400 Sobic004G198200--Sobic001G427400 Sobic003G040100--Sobic009G190400 Sobic003G040100--Sobic008G020500 Sobic003G040100--Sobic006G155900 Sobic003G040100--Sobic004G198200 Sobic003G040100--Sobic004G156600 Sobic003G040100--Sobic001G494300 Sobic003G390300 Sobic003G390300 Sobic003G040100--Sobic003G390300 Sobic003G040100--Sobic003G415500 Sobic004G061600 Sobic004G061600 Sobic003G040100--Sobic004G061600 Sobic001G494300--Sobic006G155900 Sobic001G494300--Sobic008G020500 Sobic001G494300--Sobic004G198200 Sobic001G494300--Sobic003G040100 Sobic007G019600 Sobic007G019600 Sobic001G494300--Sobic007G019600 Sobic001G494300--Sobic001G427400 Sobic001G494300--Sobic003G047200 Sobic009G163700 Sobic009G163700 Sobic001G494300--Sobic009G163700 Sobic001G494300--Sobic007G130000 Sobic008G020500--Sobic004G198200 Sobic008G020500--Sobic003G040100 Sobic008G020500--Sobic006G155900 Sobic008G020500--Sobic001G494300 Sobic008G020500--Sobic009G190400 Sobic008G020500--Sobic007G130000 Sobic008G020500--Sobic001G070200 Sobic008G020500--Sobic001G331100 Sobic008G020500--Sobic004G156600 Sobic010G234800 Sobic010G234800 Sobic003G047200--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic003G047200--Sobic001G098900 Sobic010G215300 Sobic010G215300 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic001G284900 Sobic001G284900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic003G047200--Sobic006G155900 Sobic010G202100 Sobic010G202100 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic003G414400--Sobic001G284900 Sobic003G414400--Sobic010G215300 Sobic003G414400--Sobic001G098900 Sobic003G414400--Sobic010G202100 Sobic003G414400--Sobic003G047200 Sobic003G414400--Sobic010G234800 Sobic003G414400--Sobic006G155900 Sobic003G414400--Sobic001G070200 Sobic004G271300 Sobic004G271300 Sobic003G414400--Sobic004G271300 Sobic001G070200--Sobic004G198200 Sobic001G070200--Sobic006G155900 Sobic001G070200--Sobic003G414400 Sobic006G176400 Sobic006G176400 Sobic001G070200--Sobic006G176400 Sobic009G081400 Sobic009G081400 Sobic001G070200--Sobic009G081400 Sobic001G070200--Sobic010G215300 Sobic004G133000 Sobic004G133000 Sobic001G070200--Sobic004G133000 Sobic001G070200--Sobic008G020500 Sobic001G070200--Sobic009G190400 Sobic004G115600 Sobic004G115600 Sobic001G331100--Sobic004G115600 Sobic006G108000 Sobic006G108000 Sobic001G331100--Sobic006G108000 Sobic001G331100--Sobic002G279300 Sobic009G254400 Sobic009G254400 Sobic001G331100--Sobic009G254400 Sobic001G331100--Sobic006G155900 Sobic008G163800 Sobic008G163800 Sobic001G331100--Sobic008G163800 Sobic003G406500 Sobic003G406500 Sobic001G331100--Sobic003G406500 Sobic001G331100--Sobic003G040100 Sobic001G263500 Sobic001G263500 Sobic001G331100--Sobic001G263500
Octagon: transcription factors


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