Gene annotation
Transcriptome id Sobic.009G064600.2
Synonym
Functional annotation phototropic-responsive NPH3 family protein, putative, expressed
UniProt A0A1Z5R184
Pfam PF03000
Panther DB PTHR32370 PTHR32370:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G52770 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os05g08530.1 : phototropic-responsive NPH3 family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK02980 , KQK07231
Barley HORVU3Hr1G023030.2 , HORVU3Hr1G023030.7 , HORVU3Hr1G023030.6 , HORVU3Hr1G023030.5 , HORVU3Hr1G023030.4 , HORVU7Hr1G038170.2 , HORVU7Hr1G038170.3 , HORVU7Hr1G038170.1 , HORVU7Hr1G038170.6 , HORVU7Hr1G038170.7 , HORVU7Hr1G038170.4 , HORVU7Hr1G038170.5 , HORVU7Hr1G038170.8
Wheat TraesCS5D02G175800 , TraesCS5D02G175800 , TraesCS1B02G137700 , TraesCS1B02G137700 , TraesCS3B02G143900 , TraesCS5B02G168600 , TraesCS5B02G168600 , TraesCS5B02G168600 , TraesCS5B02G168600 , TraesCS5A02G171100 , TraesCS3A02G123900 , TraesCS3A02G123900 , TraesCS3D02G125500 , TraesCS1D02G119100 , TraesCS3D02G125500 , TraesCS1A02G118100
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G190400 expressed protein -
2 Sobic.001G244400 IQ calmodulin-binding motif family protein, putative, expressed -
3 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
4 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
5 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
6 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
7 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
8 Sobic.004G061600 expressed protein -
9 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
10 Sobic.002G425600 down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed K14432: ABA responsive element binding factor
11 Sobic.010G202100 expressed protein -
12 Sobic.004G156600 - -
13 Sobic.004G198200 expressed protein -
14 Sobic.003G415500 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
15 Sobic.003G390300 expressed protein -
16 Sobic.002G282100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
17 Sobic.001G331100 expressed protein -
18 Sobic.007G019600 expressed protein -
19 Sobic.007G076800 B3 DNA binding domain containing protein, expressed -
20 Sobic.003G406500 antifreeze glycoprotein, putative, expressed -


Gene co-expression network
sample Sobic009G064600 Sobic009G064600 Sobic009G190400 Sobic009G190400 Sobic009G064600--Sobic009G190400 Sobic001G244400 Sobic001G244400 Sobic009G064600--Sobic001G244400 Sobic006G155900 Sobic006G155900 Sobic009G064600--Sobic006G155900 Sobic003G040100 Sobic003G040100 Sobic009G064600--Sobic003G040100 Sobic001G098900 Sobic001G098900 Sobic009G064600--Sobic001G098900 Sobic001G062700 Sobic001G062700 Sobic009G064600--Sobic001G062700 Sobic007G153300 Sobic007G153300 Sobic009G064600--Sobic007G153300 Sobic004G061600 Sobic004G061600 Sobic009G064600--Sobic004G061600 Sobic001G462100 Sobic001G462100 Sobic009G064600--Sobic001G462100 Sobic009G190400--Sobic003G040100 Sobic009G190400--Sobic006G155900 Sobic004G198200 Sobic004G198200 Sobic009G190400--Sobic004G198200 Sobic009G190400--Sobic009G064600 Sobic003G415500 Sobic003G415500 Sobic009G190400--Sobic003G415500 Sobic008G020500 Sobic008G020500 Sobic009G190400--Sobic008G020500 Sobic002G282100 Sobic002G282100 Sobic009G190400--Sobic002G282100 Sobic004G156600 Sobic004G156600 Sobic009G190400--Sobic004G156600 Sobic001G070200 Sobic001G070200 Sobic009G190400--Sobic001G070200 Sobic001G244400--Sobic001G098900 Sobic001G244400--Sobic009G064600 Sobic003G414400 Sobic003G414400 Sobic001G244400--Sobic003G414400 Sobic010G215300 Sobic010G215300 Sobic001G244400--Sobic010G215300 Sobic001G244400--Sobic006G155900 Sobic010G202100 Sobic010G202100 Sobic001G244400--Sobic010G202100 Sobic001G244400--Sobic009G190400 Sobic010G234800 Sobic010G234800 Sobic001G244400--Sobic010G234800 Sobic003G047200 Sobic003G047200 Sobic001G244400--Sobic003G047200 Sobic006G155900--Sobic009G190400 Sobic006G155900--Sobic004G198200 Sobic006G155900--Sobic003G040100 Sobic001G494300 Sobic001G494300 Sobic006G155900--Sobic001G494300 Sobic006G155900--Sobic008G020500 Sobic006G155900--Sobic003G047200 Sobic006G155900--Sobic003G414400 Sobic006G155900--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic006G155900--Sobic001G331100 Sobic003G040100--Sobic009G190400 Sobic003G040100--Sobic008G020500 Sobic003G040100--Sobic006G155900 Sobic003G040100--Sobic004G198200 Sobic003G040100--Sobic004G156600 Sobic003G040100--Sobic001G494300 Sobic003G390300 Sobic003G390300 Sobic003G040100--Sobic003G390300 Sobic003G040100--Sobic003G415500 Sobic003G040100--Sobic004G061600 Sobic001G098900--Sobic010G215300 Sobic001G098900--Sobic010G234800 Sobic001G098900--Sobic010G202100 Sobic001G098900--Sobic001G244400 Sobic001G098900--Sobic003G047200 Sobic001G098900--Sobic003G414400 Sobic002G293800 Sobic002G293800 Sobic001G098900--Sobic002G293800 Sobic008G114500 Sobic008G114500 Sobic001G098900--Sobic008G114500 Sobic001G098900--Sobic006G155900 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic010G119600 Sobic010G119600 Sobic001G062700--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic001G062700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic001G062700--Sobic007G206700 Sobic010G014900 Sobic010G014900 Sobic001G062700--Sobic010G014900 Sobic004G107400 Sobic004G107400 Sobic001G062700--Sobic004G107400 Sobic003G359200 Sobic003G359200 Sobic007G153300--Sobic003G359200 Sobic003G406500 Sobic003G406500 Sobic007G153300--Sobic003G406500 Sobic003G006500 Sobic003G006500 Sobic007G153300--Sobic003G006500 Sobic007G153300--Sobic004G061600 Sobic007G153300--Sobic004G156600 Sobic007G153300--Sobic003G390300 Sobic008G163800 Sobic008G163800 Sobic007G153300--Sobic008G163800 Sobic007G153300--Sobic001G062700 Sobic007G153300--Sobic008G136900 Sobic004G061600--Sobic003G390300 Sobic007G158400 Sobic007G158400 Sobic004G061600--Sobic007G158400 Sobic004G061600--Sobic008G136900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G061600--Sobic004G107400 Sobic005G168500 Sobic005G168500 Sobic004G061600--Sobic005G168500 Sobic001G137200 Sobic001G137200 Sobic004G061600--Sobic001G137200 Sobic006G273500 Sobic006G273500 Sobic004G061600--Sobic006G273500 Sobic001G005000 Sobic001G005000 Sobic001G462100--Sobic001G005000 Sobic006G018900 Sobic006G018900 Sobic001G462100--Sobic006G018900 Sobic004G107900 Sobic004G107900 Sobic001G462100--Sobic004G107900 Sobic006G166700 Sobic006G166700 Sobic001G462100--Sobic006G166700 Sobic010G014300 Sobic010G014300 Sobic001G462100--Sobic010G014300 Sobic010G194500 Sobic010G194500 Sobic001G462100--Sobic010G194500 Sobic001G462100--Sobic007G206700 Sobic001G462100--Sobic009G190400 Sobic009G076800 Sobic009G076800 Sobic001G462100--Sobic009G076800
Octagon: transcription factors


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