Gene annotation
Transcriptome id Sobic.007G076800.2
Synonym Sb07g006170
Functional annotation B3 DNA binding domain containing protein, expressed
UniProt A0A1Z5R8I7
Pfam PF02362
Panther DB PTHR31391 PTHR31391:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G19184 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os06g09420.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054883 , Zm00025a029909 , Zm00025a028565
Brachypodium -
Barley HORVU4Hr1G035810.43 , HORVU2Hr1G029110.3 , HORVU2Hr1G029110.2 , HORVU2Hr1G029110.1 , HORVU2Hr1G029110.7 , HORVU2Hr1G029110.6 , HORVU2Hr1G029110.5 , HORVU4Hr1G035810.31 , HORVU4Hr1G035810.37 , HORVU4Hr1G035810.35 , HORVU4Hr1G035810.34 , HORVU4Hr1G035810.39 , HORVU4Hr1G035810.42 , HORVU4Hr1G035810.41 , HORVU4Hr1G035810.8 , HORVU4Hr1G035810.22 , HORVU4Hr1G035810.23 , HORVU4Hr1G035810.27 , HORVU4Hr1G035810.28 , HORVU7Hr1G037040.8 , HORVU7Hr1G037040.3 , HORVU7Hr1G037040.2 , HORVU7Hr1G037040.1 , HORVU7Hr1G037040.7 , HORVU7Hr1G037040.6 , HORVU7Hr1G037040.5 , HORVU7Hr1G037040.4 , HORVU4Hr1G035810.24 , HORVU4Hr1G035810.14 , HORVU4Hr1G035810.17 , HORVU4Hr1G035810.16 , HORVU4Hr1G035810.10 , HORVU4Hr1G035810.19 , HORVU4Hr1G035810.36
Wheat TraesCS7D02G181300 , TraesCS7B02G085000 , TraesCS7A02G179800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G390300 expressed protein -
2 Sobic.004G061600 expressed protein -
3 Sobic.004G107400 expressed protein -
4 Sobic.008G136900 expressed protein -
5 Sobic.009G005800 formin-like protein 6 precursor, putative, expressed -
6 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
7 Sobic.002G010500 expressed protein -
8 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
9 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
10 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I
11 Sobic.006G186200 exostosin family domain containing protein, expressed -
12 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
13 Sobic.010G002850 - -
14 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
15 Sobic.004G156600 - -
16 Sobic.003G290700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
17 Sobic.005G209800 nodulin, putative, expressed -
18 Sobic.002G285525 - -
19 Sobic.010G014900 expressed protein -
20 Sobic.002G173600 UDP-glucoronosyl/UDP-glucosyl transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic007G076800 Sobic007G076800 Sobic003G390300 Sobic003G390300 Sobic007G076800--Sobic003G390300 Sobic004G061600 Sobic004G061600 Sobic007G076800--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic007G076800--Sobic004G107400 Sobic008G136900 Sobic008G136900 Sobic007G076800--Sobic008G136900 Sobic009G005800 Sobic009G005800 Sobic007G076800--Sobic009G005800 Sobic001G062700 Sobic001G062700 Sobic007G076800--Sobic001G062700 Sobic002G010500 Sobic002G010500 Sobic007G076800--Sobic002G010500 Sobic010G119600 Sobic010G119600 Sobic007G076800--Sobic010G119600 Sobic007G206700 Sobic007G206700 Sobic007G076800--Sobic007G206700 Sobic003G390300--Sobic004G107400 Sobic003G390300--Sobic004G061600 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G104900 Sobic003G104900 Sobic003G390300--Sobic003G104900 Sobic010G014900 Sobic010G014900 Sobic003G390300--Sobic010G014900 Sobic007G158400 Sobic007G158400 Sobic003G390300--Sobic007G158400 Sobic001G137200 Sobic001G137200 Sobic003G390300--Sobic001G137200 Sobic009G028600 Sobic009G028600 Sobic003G390300--Sobic009G028600 Sobic004G061600--Sobic003G390300 Sobic004G061600--Sobic007G158400 Sobic004G061600--Sobic008G136900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G061600--Sobic004G107400 Sobic005G168500 Sobic005G168500 Sobic004G061600--Sobic005G168500 Sobic004G061600--Sobic001G137200 Sobic006G273500 Sobic006G273500 Sobic004G061600--Sobic006G273500 Sobic006G171000 Sobic006G171000 Sobic004G107400--Sobic006G171000 Sobic004G107400--Sobic010G014900 Sobic004G107400--Sobic001G137200 Sobic004G107400--Sobic003G390300 Sobic005G209800 Sobic005G209800 Sobic004G107400--Sobic005G209800 Sobic002G078850 Sobic002G078850 Sobic004G107400--Sobic002G078850 Sobic004G107400--Sobic003G104900 Sobic005G231800 Sobic005G231800 Sobic004G107400--Sobic005G231800 Sobic008G002100 Sobic008G002100 Sobic004G107400--Sobic008G002100 Sobic008G136900--Sobic003G390300 Sobic008G136900--Sobic004G061600 Sobic008G136900--Sobic004G107400 Sobic001G103400 Sobic001G103400 Sobic008G136900--Sobic001G103400 Sobic008G136900--Sobic007G158400 Sobic001G483700 Sobic001G483700 Sobic008G136900--Sobic001G483700 Sobic008G136900--Sobic010G014900 Sobic008G136900--Sobic003G104900 Sobic008G136900--Sobic009G028600 Sobic009G005800--Sobic005G231800 Sobic001G457100 Sobic001G457100 Sobic009G005800--Sobic001G457100 Sobic004G347866 Sobic004G347866 Sobic009G005800--Sobic004G347866 Sobic004G089700 Sobic004G089700 Sobic009G005800--Sobic004G089700 Sobic002G048250 Sobic002G048250 Sobic009G005800--Sobic002G048250 Sobic004G226300 Sobic004G226300 Sobic009G005800--Sobic004G226300 Sobic007G183000 Sobic007G183000 Sobic009G005800--Sobic007G183000 Sobic009G005800--Sobic002G010500 Sobic008G119200 Sobic008G119200 Sobic009G005800--Sobic008G119200 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic001G062700--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic001G062700--Sobic010G259200 Sobic001G062700--Sobic007G206700 Sobic001G062700--Sobic010G014900 Sobic001G062700--Sobic004G107400 Sobic002G010500--Sobic005G231800 Sobic004G224300 Sobic004G224300 Sobic002G010500--Sobic004G224300 Sobic002G010500--Sobic001G457100 Sobic002G010500--Sobic004G089700 Sobic008G023000 Sobic008G023000 Sobic002G010500--Sobic008G023000 Sobic001G527400 Sobic001G527400 Sobic002G010500--Sobic001G527400 Sobic003G337700 Sobic003G337700 Sobic002G010500--Sobic003G337700 Sobic002G010500--Sobic008G002100 Sobic002G010500--Sobic007G183000 Sobic010G119600--Sobic010G259200 Sobic010G119600--Sobic001G483700 Sobic010G119600--Sobic003G390300 Sobic010G119600--Sobic001G137200 Sobic010G002850 Sobic010G002850 Sobic010G119600--Sobic010G002850 Sobic010G119600--Sobic007G206700 Sobic010G119600--Sobic003G104900 Sobic010G119600--Sobic001G062700 Sobic003G083700 Sobic003G083700 Sobic010G119600--Sobic003G083700 Sobic007G206700--Sobic010G259200 Sobic002G001300 Sobic002G001300 Sobic007G206700--Sobic002G001300 Sobic007G206700--Sobic003G083700 Sobic007G206700--Sobic010G119600 Sobic001G402701 Sobic001G402701 Sobic007G206700--Sobic001G402701 Sobic007G206700--Sobic003G390300 Sobic007G206700--Sobic003G104900 Sobic010G087200 Sobic010G087200 Sobic007G206700--Sobic010G087200 Sobic007G206700--Sobic001G062700
Octagon: transcription factors


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