Gene annotation
Transcriptome id Sobic.004G156600.1
Synonym
Functional annotation -
UniProt A0A194YQ11
Pfam PF08797
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016818; hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides GO:0008270zinc ion binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT5G43530 : Helicase protein with RING/U-box domain
RAP-DB (Rice) LOC_Os04g09800.1 : SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G390300 expressed protein -
2 Sobic.002G299800 expressed protein -
3 Sobic.006G186200 exostosin family domain containing protein, expressed -
4 Sobic.004G061600 expressed protein -
5 Sobic.004G107400 expressed protein -
6 Sobic.008G136900 expressed protein -
7 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
8 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
9 Sobic.007G076800 B3 DNA binding domain containing protein, expressed -
10 Sobic.001G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
11 Sobic.004G128800 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
12 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
13 Sobic.010G014900 expressed protein -
14 Sobic.009G028600 expressed protein -
15 Sobic.005G168500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
16 Sobic.007G158400 DUF617 domain containing protein, expressed -
17 Sobic.008G163800 expressed protein -
18 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
19 Sobic.003G359200 DUF740 domain containing protein, expressed -
20 Sobic.006G273500 expressed protein -


Gene co-expression network
sample Sobic004G156600 Sobic004G156600 Sobic003G390300 Sobic003G390300 Sobic004G156600--Sobic003G390300 Sobic002G299800 Sobic002G299800 Sobic004G156600--Sobic002G299800 Sobic006G186200 Sobic006G186200 Sobic004G156600--Sobic006G186200 Sobic004G061600 Sobic004G061600 Sobic004G156600--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic004G156600--Sobic004G107400 Sobic008G136900 Sobic008G136900 Sobic004G156600--Sobic008G136900 Sobic001G062700 Sobic001G062700 Sobic004G156600--Sobic001G062700 Sobic003G040100 Sobic003G040100 Sobic004G156600--Sobic003G040100 Sobic007G076800 Sobic007G076800 Sobic004G156600--Sobic007G076800 Sobic003G390300--Sobic004G107400 Sobic003G390300--Sobic004G061600 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G104900 Sobic003G104900 Sobic003G390300--Sobic003G104900 Sobic010G014900 Sobic010G014900 Sobic003G390300--Sobic010G014900 Sobic007G158400 Sobic007G158400 Sobic003G390300--Sobic007G158400 Sobic001G137200 Sobic001G137200 Sobic003G390300--Sobic001G137200 Sobic009G028600 Sobic009G028600 Sobic003G390300--Sobic009G028600 Sobic002G299800--Sobic004G156600 Sobic010G078800 Sobic010G078800 Sobic002G299800--Sobic010G078800 Sobic002G299800--Sobic006G186200 Sobic002G299800--Sobic007G076800 Sobic002G299800--Sobic004G061600 Sobic002G299800--Sobic003G390300 Sobic002G299800--Sobic001G062700 Sobic002G299800--Sobic008G136900 Sobic003G265300 Sobic003G265300 Sobic002G299800--Sobic003G265300 Sobic006G273500 Sobic006G273500 Sobic006G186200--Sobic006G273500 Sobic006G186200--Sobic004G061600 Sobic006G186200--Sobic004G107400 Sobic006G186200--Sobic003G390300 Sobic006G186200--Sobic010G014900 Sobic006G186200--Sobic007G158400 Sobic006G186200--Sobic004G156600 Sobic003G290700 Sobic003G290700 Sobic006G186200--Sobic003G290700 Sobic006G186200--Sobic001G137200 Sobic004G061600--Sobic003G390300 Sobic004G061600--Sobic007G158400 Sobic004G061600--Sobic008G136900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G061600--Sobic004G107400 Sobic005G168500 Sobic005G168500 Sobic004G061600--Sobic005G168500 Sobic004G061600--Sobic001G137200 Sobic004G061600--Sobic006G273500 Sobic006G171000 Sobic006G171000 Sobic004G107400--Sobic006G171000 Sobic004G107400--Sobic010G014900 Sobic004G107400--Sobic001G137200 Sobic004G107400--Sobic003G390300 Sobic005G209800 Sobic005G209800 Sobic004G107400--Sobic005G209800 Sobic002G078850 Sobic002G078850 Sobic004G107400--Sobic002G078850 Sobic004G107400--Sobic003G104900 Sobic005G231800 Sobic005G231800 Sobic004G107400--Sobic005G231800 Sobic008G002100 Sobic008G002100 Sobic004G107400--Sobic008G002100 Sobic008G136900--Sobic003G390300 Sobic008G136900--Sobic004G061600 Sobic008G136900--Sobic004G107400 Sobic001G103400 Sobic001G103400 Sobic008G136900--Sobic001G103400 Sobic008G136900--Sobic007G158400 Sobic001G483700 Sobic001G483700 Sobic008G136900--Sobic001G483700 Sobic008G136900--Sobic010G014900 Sobic008G136900--Sobic003G104900 Sobic008G136900--Sobic009G028600 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic010G119600 Sobic010G119600 Sobic001G062700--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic001G062700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic001G062700--Sobic007G206700 Sobic001G062700--Sobic010G014900 Sobic001G062700--Sobic004G107400 Sobic009G190400 Sobic009G190400 Sobic003G040100--Sobic009G190400 Sobic008G020500 Sobic008G020500 Sobic003G040100--Sobic008G020500 Sobic006G155900 Sobic006G155900 Sobic003G040100--Sobic006G155900 Sobic004G198200 Sobic004G198200 Sobic003G040100--Sobic004G198200 Sobic003G040100--Sobic004G156600 Sobic001G494300 Sobic001G494300 Sobic003G040100--Sobic001G494300 Sobic003G040100--Sobic003G390300 Sobic003G415500 Sobic003G415500 Sobic003G040100--Sobic003G415500 Sobic003G040100--Sobic004G061600 Sobic007G076800--Sobic003G390300 Sobic007G076800--Sobic004G061600 Sobic007G076800--Sobic004G107400 Sobic007G076800--Sobic008G136900 Sobic009G005800 Sobic009G005800 Sobic007G076800--Sobic009G005800 Sobic007G076800--Sobic001G062700 Sobic002G010500 Sobic002G010500 Sobic007G076800--Sobic002G010500 Sobic007G076800--Sobic010G119600 Sobic007G076800--Sobic007G206700
Octagon: transcription factors


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