Gene annotation
Transcriptome id Sobic.007G153300.1
Synonym SGR5, Sb07g022700, ATIDD15
Functional annotation ZOS8-07 - C2H2 zinc finger protein, expressed
UniProt C5YM72
Pfam -
Panther DB PTHR10593 PTHR10593:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01940 : C2H2-like zinc finger protein
RAP-DB (Rice) LOC_Os08g36390.1 : ZOS8-07 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a001483 , Zm00025a005392 , Zm00025a036023 , Zm00025a023015 , Zm00025a052944 , Zm00025a014047 , Zm00025a047221 , Zm00025a035820
Brachypodium KQJ90469 , KQK22673 , PNT68259 , PNT68255 , PNT68256 , KQJ98591 , KQJ98590 , PNT64697 , KQJ90470
Barley HORVU4Hr1G064740.6 , HORVU4Hr1G064740.5 , HORVU4Hr1G064740.4 , HORVU4Hr1G064740.3 , HORVU4Hr1G064740.2
Wheat TraesCS3B02G237700 , TraesCS5B02G232200 , TraesCS3A02G205800 , TraesCS4B02G230800 , TraesCS4D02G232000 , TraesCS5A02G233700 , TraesCS5D02G240600 , TraesCS3B02G195900 , TraesCS4A02G074700 , TraesCS3D02G209800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G359200 DUF740 domain containing protein, expressed -
2 Sobic.003G406500 antifreeze glycoprotein, putative, expressed -
3 Sobic.003G006500 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.004G061600 expressed protein -
5 Sobic.004G156600 - -
6 Sobic.003G390300 expressed protein -
7 Sobic.008G163800 expressed protein -
8 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
9 Sobic.008G136900 expressed protein -
10 Sobic.007G158400 DUF617 domain containing protein, expressed -
11 Sobic.004G107400 expressed protein -
12 Sobic.010G014900 expressed protein -
13 Sobic.005G168500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
14 Sobic.006G186200 exostosin family domain containing protein, expressed -
15 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
16 Sobic.006G163650 - -
17 Sobic.006G108000 formin, putative, expressed -
18 Sobic.001G414200 expressed protein -
19 Sobic.002G425600 down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed K14432: ABA responsive element binding factor
20 Sobic.003G148500 endoglucanase, putative, expressed -


Gene co-expression network
sample Sobic007G153300 Sobic007G153300 Sobic003G359200 Sobic003G359200 Sobic007G153300--Sobic003G359200 Sobic003G406500 Sobic003G406500 Sobic007G153300--Sobic003G406500 Sobic003G006500 Sobic003G006500 Sobic007G153300--Sobic003G006500 Sobic004G061600 Sobic004G061600 Sobic007G153300--Sobic004G061600 Sobic004G156600 Sobic004G156600 Sobic007G153300--Sobic004G156600 Sobic003G390300 Sobic003G390300 Sobic007G153300--Sobic003G390300 Sobic008G163800 Sobic008G163800 Sobic007G153300--Sobic008G163800 Sobic001G062700 Sobic001G062700 Sobic007G153300--Sobic001G062700 Sobic008G136900 Sobic008G136900 Sobic007G153300--Sobic008G136900 Sobic003G359200--Sobic007G153300 Sobic004G107400 Sobic004G107400 Sobic003G359200--Sobic004G107400 Sobic010G014900 Sobic010G014900 Sobic003G359200--Sobic010G014900 Sobic003G359200--Sobic001G062700 Sobic003G359200--Sobic003G390300 Sobic007G158400 Sobic007G158400 Sobic003G359200--Sobic007G158400 Sobic003G359200--Sobic003G006500 Sobic003G359200--Sobic008G163800 Sobic005G168500 Sobic005G168500 Sobic003G359200--Sobic005G168500 Sobic009G254400 Sobic009G254400 Sobic003G406500--Sobic009G254400 Sobic003G406500--Sobic007G153300 Sobic006G108000 Sobic006G108000 Sobic003G406500--Sobic006G108000 Sobic003G406500--Sobic008G163800 Sobic003G406500--Sobic003G006500 Sobic001G263500 Sobic001G263500 Sobic003G406500--Sobic001G263500 Sobic003G406500--Sobic003G359200 Sobic001G331100 Sobic001G331100 Sobic003G406500--Sobic001G331100 Sobic010G209800 Sobic010G209800 Sobic003G406500--Sobic010G209800 Sobic003G006500--Sobic007G158400 Sobic003G006500--Sobic010G014900 Sobic003G006500--Sobic005G168500 Sobic003G006500--Sobic004G061600 Sobic003G006500--Sobic008G136900 Sobic003G006500--Sobic007G153300 Sobic003G006500--Sobic004G107400 Sobic003G006500--Sobic003G359200 Sobic003G006500--Sobic003G390300 Sobic004G061600--Sobic003G390300 Sobic004G061600--Sobic007G158400 Sobic004G061600--Sobic008G136900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G061600--Sobic004G107400 Sobic004G061600--Sobic005G168500 Sobic001G137200 Sobic001G137200 Sobic004G061600--Sobic001G137200 Sobic006G273500 Sobic006G273500 Sobic004G061600--Sobic006G273500 Sobic004G156600--Sobic003G390300 Sobic002G299800 Sobic002G299800 Sobic004G156600--Sobic002G299800 Sobic006G186200 Sobic006G186200 Sobic004G156600--Sobic006G186200 Sobic004G156600--Sobic004G061600 Sobic004G156600--Sobic004G107400 Sobic004G156600--Sobic008G136900 Sobic004G156600--Sobic001G062700 Sobic003G040100 Sobic003G040100 Sobic004G156600--Sobic003G040100 Sobic007G076800 Sobic007G076800 Sobic004G156600--Sobic007G076800 Sobic003G390300--Sobic004G107400 Sobic003G390300--Sobic004G061600 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G104900 Sobic003G104900 Sobic003G390300--Sobic003G104900 Sobic003G390300--Sobic010G014900 Sobic003G390300--Sobic007G158400 Sobic003G390300--Sobic001G137200 Sobic009G028600 Sobic009G028600 Sobic003G390300--Sobic009G028600 Sobic008G031600 Sobic008G031600 Sobic008G163800--Sobic008G031600 Sobic001G103400 Sobic001G103400 Sobic008G163800--Sobic001G103400 Sobic008G163800--Sobic010G014900 Sobic001G460700 Sobic001G460700 Sobic008G163800--Sobic001G460700 Sobic008G163800--Sobic007G158400 Sobic008G163800--Sobic004G061600 Sobic008G163800--Sobic003G390300 Sobic008G163800--Sobic004G107400 Sobic010G029200 Sobic010G029200 Sobic008G163800--Sobic010G029200 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic010G119600 Sobic010G119600 Sobic001G062700--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic001G062700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic001G062700--Sobic007G206700 Sobic001G062700--Sobic010G014900 Sobic001G062700--Sobic004G107400 Sobic008G136900--Sobic003G390300 Sobic008G136900--Sobic004G061600 Sobic008G136900--Sobic004G107400 Sobic008G136900--Sobic001G103400 Sobic008G136900--Sobic007G158400 Sobic001G483700 Sobic001G483700 Sobic008G136900--Sobic001G483700 Sobic008G136900--Sobic010G014900 Sobic008G136900--Sobic003G104900 Sobic008G136900--Sobic009G028600
Octagon: transcription factors


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