Gene annotation
Transcriptome id Sobic.003G148500.1
Synonym Sb03g012840, AtGH9B13, GH9B13
Functional annotation endoglucanase, putative, expressed
UniProt C5XIT7
Pfam PF00759
Panther DB PTHR22298 PTHR22298:SF55
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G02290 : glycosyl hydrolase 9B13
RAP-DB (Rice) LOC_Os01g21070.1 : endoglucanase, putative, expressed
MaizeGDB (Corn) Zm00025a040249 , Zm00025a021938 , Zm00025a047771 , Zm00025a035938 , Zm00025a036077 , Zm00025a042715 , Zm00025a018779
Brachypodium KQK03329 , KQJ82838 , PNT65007 , KQK20451 , KQJ98284 , KQK18693 , KQK04131
Barley HORVU0Hr1G020040.1 , HORVU0Hr1G020040.2 , HORVU5Hr1G081200.3 , HORVU7Hr1G041610.3 , HORVU5Hr1G081200.9 , HORVU1Hr1G079980.14 , HORVU1Hr1G079980.15 , HORVU1Hr1G079980.16 , HORVU1Hr1G079980.17 , HORVU1Hr1G079980.10 , HORVU1Hr1G079980.11 , HORVU1Hr1G079980.12 , HORVU1Hr1G079980.13 , HORVU1Hr1G079980.18 , HORVU3Hr1G029470.3 , HORVU3Hr1G029470.1 , HORVU7Hr1G041610.1 , HORVU3Hr1G029470.2 , HORVU7Hr1G041610.7 , HORVU7Hr1G041610.6 , HORVU7Hr1G041610.5 , HORVU3Hr1G029470.6 , HORVU3Hr1G029470.9 , HORVU3Hr1G029470.5 , HORVU7Hr1G041610.9 , HORVU7Hr1G041610.8 , HORVU3Hr1G029470.4 , HORVU7Hr1G041610.11 , HORVU7Hr1G041610.10 , HORVU3Hr1G029470.7 , HORVU3Hr1G029470.8 , HORVU1Hr1G019520.6 , HORVU1Hr1G019520.4 , HORVU1Hr1G019520.5 , HORVU1Hr1G019520.2 , HORVU1Hr1G019520.3 , HORVU1Hr1G019520.1 , HORVU5Hr1G081200.5 , HORVU5Hr1G081200.2 , HORVU1Hr1G015550.2 , HORVU1Hr1G015550.1 , HORVU2Hr1G111880.1 , HORVU2Hr1G111880.2 , HORVU1Hr1G079980.8 , HORVU1Hr1G079980.9 , HORVU1Hr1G079980.6 , HORVU1Hr1G079980.7 , HORVU1Hr1G079980.4 , HORVU1Hr1G079980.5 , HORVU1Hr1G079980.2 , HORVU1Hr1G079980.3 , HORVU1Hr1G079980.1
Wheat TraesCS5A02G172200 , TraesCS5A02G172200 , TraesCS6D02G089200 , TraesCS7B02G219100 , TraesCS5A02G317400 , TraesCS3D02G153400 , TraesCS1B02G107700 , TraesCS1A02G072300 , TraesCS7A02G204500 , TraesCS6B02G122000 , TraesCS7B02G111700 , TraesCS7B02G111700 , TraesCS7D02G146000 , TraesCS1D02G074700 , TraesCS1D02G075100 , TraesCS1A02G360700 , TraesCS5B02G169500 , TraesCS5B02G169600 , TraesCS7A02G144700 , TraesCS1B02G377100 , TraesCS1A02G088700 , TraesCS7D02G207600 , TraesCS3A02G144600 , TraesCS1A02G072100 , TraesCS7B02G046900 , TraesCS1B02G090700 , TraesCS5B02G318000 , TraesCS1D02G090100 , TraesCS1A02G360700 , TraesCS1A02G360700 , TraesCS1D02G365100 , TraesCS5A02G172100 , TraesCS5D02G323700 , TraesCS5D02G323700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
2 Sobic.006G186200 exostosin family domain containing protein, expressed -
3 Sobic.003G390300 expressed protein -
4 Sobic.003G359200 DUF740 domain containing protein, expressed -
5 Sobic.003G415500 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
6 Sobic.004G107400 expressed protein -
7 Sobic.004G156600 - -
8 Sobic.004G061600 expressed protein -
9 Sobic.008G136900 expressed protein -
10 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
11 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
12 Sobic.007G076800 B3 DNA binding domain containing protein, expressed -
13 Sobic.008G163800 expressed protein -
14 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
15 Sobic.001G402701 - -
16 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
17 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.010G014900 expressed protein -
19 Sobic.009G028600 expressed protein -
20 Sobic.001G137200 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic003G148500 Sobic003G148500 Sobic001G062700 Sobic001G062700 Sobic003G148500--Sobic001G062700 Sobic006G186200 Sobic006G186200 Sobic003G148500--Sobic006G186200 Sobic003G390300 Sobic003G390300 Sobic003G148500--Sobic003G390300 Sobic003G359200 Sobic003G359200 Sobic003G148500--Sobic003G359200 Sobic003G415500 Sobic003G415500 Sobic003G148500--Sobic003G415500 Sobic004G107400 Sobic004G107400 Sobic003G148500--Sobic004G107400 Sobic004G156600 Sobic004G156600 Sobic003G148500--Sobic004G156600 Sobic004G061600 Sobic004G061600 Sobic003G148500--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic003G148500--Sobic008G136900 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic010G119600 Sobic010G119600 Sobic001G062700--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic001G062700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic001G062700--Sobic007G206700 Sobic010G014900 Sobic010G014900 Sobic001G062700--Sobic010G014900 Sobic001G062700--Sobic004G107400 Sobic006G273500 Sobic006G273500 Sobic006G186200--Sobic006G273500 Sobic006G186200--Sobic004G061600 Sobic006G186200--Sobic004G107400 Sobic006G186200--Sobic003G390300 Sobic006G186200--Sobic010G014900 Sobic007G158400 Sobic007G158400 Sobic006G186200--Sobic007G158400 Sobic006G186200--Sobic004G156600 Sobic003G290700 Sobic003G290700 Sobic006G186200--Sobic003G290700 Sobic001G137200 Sobic001G137200 Sobic006G186200--Sobic001G137200 Sobic003G390300--Sobic004G107400 Sobic003G390300--Sobic004G061600 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G104900 Sobic003G104900 Sobic003G390300--Sobic003G104900 Sobic003G390300--Sobic010G014900 Sobic003G390300--Sobic007G158400 Sobic003G390300--Sobic001G137200 Sobic009G028600 Sobic009G028600 Sobic003G390300--Sobic009G028600 Sobic007G153300 Sobic007G153300 Sobic003G359200--Sobic007G153300 Sobic003G359200--Sobic004G107400 Sobic003G359200--Sobic010G014900 Sobic003G359200--Sobic001G062700 Sobic003G359200--Sobic003G390300 Sobic003G359200--Sobic007G158400 Sobic003G006500 Sobic003G006500 Sobic003G359200--Sobic003G006500 Sobic008G163800 Sobic008G163800 Sobic003G359200--Sobic008G163800 Sobic005G168500 Sobic005G168500 Sobic003G359200--Sobic005G168500 Sobic003G415500--Sobic007G206700 Sobic003G040100 Sobic003G040100 Sobic003G415500--Sobic003G040100 Sobic009G190400 Sobic009G190400 Sobic003G415500--Sobic009G190400 Sobic003G415500--Sobic003G390300 Sobic003G083700 Sobic003G083700 Sobic003G415500--Sobic003G083700 Sobic003G415500--Sobic001G062700 Sobic003G226100 Sobic003G226100 Sobic003G415500--Sobic003G226100 Sobic003G415500--Sobic003G148500 Sobic007G076800 Sobic007G076800 Sobic003G415500--Sobic007G076800 Sobic006G171000 Sobic006G171000 Sobic004G107400--Sobic006G171000 Sobic004G107400--Sobic010G014900 Sobic004G107400--Sobic001G137200 Sobic004G107400--Sobic003G390300 Sobic005G209800 Sobic005G209800 Sobic004G107400--Sobic005G209800 Sobic002G078850 Sobic002G078850 Sobic004G107400--Sobic002G078850 Sobic004G107400--Sobic003G104900 Sobic005G231800 Sobic005G231800 Sobic004G107400--Sobic005G231800 Sobic008G002100 Sobic008G002100 Sobic004G107400--Sobic008G002100 Sobic004G156600--Sobic003G390300 Sobic002G299800 Sobic002G299800 Sobic004G156600--Sobic002G299800 Sobic004G156600--Sobic006G186200 Sobic004G156600--Sobic004G061600 Sobic004G156600--Sobic004G107400 Sobic004G156600--Sobic008G136900 Sobic004G156600--Sobic001G062700 Sobic004G156600--Sobic003G040100 Sobic004G156600--Sobic007G076800 Sobic004G061600--Sobic003G390300 Sobic004G061600--Sobic007G158400 Sobic004G061600--Sobic008G136900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G061600--Sobic004G107400 Sobic004G061600--Sobic005G168500 Sobic004G061600--Sobic001G137200 Sobic004G061600--Sobic006G273500 Sobic008G136900--Sobic003G390300 Sobic008G136900--Sobic004G061600 Sobic008G136900--Sobic004G107400 Sobic001G103400 Sobic001G103400 Sobic008G136900--Sobic001G103400 Sobic008G136900--Sobic007G158400 Sobic001G483700 Sobic001G483700 Sobic008G136900--Sobic001G483700 Sobic008G136900--Sobic010G014900 Sobic008G136900--Sobic003G104900 Sobic008G136900--Sobic009G028600
Octagon: transcription factors


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