Gene annotation
Transcriptome id Sobic.007G206700.1
Synonym Sb07g027400
Functional annotation lectin-like protein kinase, putative, expressed
UniProt C5YIN6
Pfam PF07714 PF00139
Panther DB PTHR27007 PTHR27007:SF48
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G06740 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os08g40280.1 : lectin-like protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a030321 , Zm00025a032502
Brachypodium KQK00999 , KQJ98961 , PNT68408 , KQJ98111 , KQJ98113 , KQJ98112
Barley HORVU1Hr1G051100.1 , HORVU5Hr1G015030.1 , HORVU6Hr1G052910.2 , HORVU6Hr1G052910.5 , HORVU6Hr1G052910.4 , HORVU7Hr1G051430.6 , HORVU7Hr1G051430.4 , HORVU7Hr1G051430.5 , HORVU7Hr1G051430.2 , HORVU7Hr1G051430.3 , HORVU7Hr1G051430.1
Wheat TraesCS6D02G258200 , TraesCS6B02G305600 , TraesCS5D02G265800 , TraesCS6A02G277600 , TraesCS5B02G256900 , TraesCS7B02G141900 , TraesCS7D02G248200 , TraesCS7D02G248200 , TraesCS7A02G249400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.003G083700 DNA binding protein, putative, expressed -
4 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
5 Sobic.001G402701 - -
6 Sobic.003G390300 expressed protein -
7 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
8 Sobic.010G087200 expressed protein -
9 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
10 Sobic.008G136900 expressed protein -
11 Sobic.010G002850 - -
12 Sobic.001G483700 Cupin domain containing protein, expressed -
13 Sobic.004G061600 expressed protein -
14 Sobic.010G014300 expressed protein -
15 Sobic.005G209800 nodulin, putative, expressed -
16 Sobic.003G415500 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
17 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
18 Sobic.009G187000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.004G107400 expressed protein -
20 Sobic.010G008000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic007G206700 Sobic007G206700 Sobic010G259200 Sobic010G259200 Sobic007G206700--Sobic010G259200 Sobic002G001300 Sobic002G001300 Sobic007G206700--Sobic002G001300 Sobic003G083700 Sobic003G083700 Sobic007G206700--Sobic003G083700 Sobic010G119600 Sobic010G119600 Sobic007G206700--Sobic010G119600 Sobic001G402701 Sobic001G402701 Sobic007G206700--Sobic001G402701 Sobic003G390300 Sobic003G390300 Sobic007G206700--Sobic003G390300 Sobic003G104900 Sobic003G104900 Sobic007G206700--Sobic003G104900 Sobic010G087200 Sobic010G087200 Sobic007G206700--Sobic010G087200 Sobic001G062700 Sobic001G062700 Sobic007G206700--Sobic001G062700 Sobic010G259200--Sobic007G206700 Sobic010G259200--Sobic002G001300 Sobic010G259200--Sobic010G119600 Sobic010G259200--Sobic003G083700 Sobic010G259200--Sobic001G402701 Sobic010G259200--Sobic003G104900 Sobic010G259200--Sobic003G390300 Sobic010G002850 Sobic010G002850 Sobic010G259200--Sobic010G002850 Sobic010G014300 Sobic010G014300 Sobic010G259200--Sobic010G014300 Sobic002G001300--Sobic010G259200 Sobic002G001300--Sobic007G206700 Sobic002G001300--Sobic003G083700 Sobic002G001300--Sobic010G087200 Sobic002G001300--Sobic010G119600 Sobic002G001300--Sobic001G402701 Sobic001G494150 Sobic001G494150 Sobic002G001300--Sobic001G494150 Sobic002G001300--Sobic003G104900 Sobic006G166700 Sobic006G166700 Sobic002G001300--Sobic006G166700 Sobic003G083700--Sobic003G104900 Sobic003G083700--Sobic010G259200 Sobic003G083700--Sobic007G206700 Sobic003G083700--Sobic002G001300 Sobic001G483700 Sobic001G483700 Sobic003G083700--Sobic001G483700 Sobic003G083700--Sobic010G002850 Sobic005G209800 Sobic005G209800 Sobic003G083700--Sobic005G209800 Sobic003G083700--Sobic003G390300 Sobic003G083700--Sobic001G402701 Sobic010G119600--Sobic010G259200 Sobic010G119600--Sobic001G483700 Sobic010G119600--Sobic003G390300 Sobic001G137200 Sobic001G137200 Sobic010G119600--Sobic001G137200 Sobic010G119600--Sobic010G002850 Sobic010G119600--Sobic007G206700 Sobic010G119600--Sobic003G104900 Sobic010G119600--Sobic001G062700 Sobic010G119600--Sobic003G083700 Sobic001G148600 Sobic001G148600 Sobic001G402701--Sobic001G148600 Sobic001G402701--Sobic010G259200 Sobic001G402701--Sobic003G083700 Sobic001G402701--Sobic007G206700 Sobic001G402701--Sobic003G104900 Sobic001G402701--Sobic010G002850 Sobic001G402701--Sobic003G390300 Sobic001G402701--Sobic010G119600 Sobic003G142900 Sobic003G142900 Sobic001G402701--Sobic003G142900 Sobic004G107400 Sobic004G107400 Sobic003G390300--Sobic004G107400 Sobic004G061600 Sobic004G061600 Sobic003G390300--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G390300--Sobic003G104900 Sobic010G014900 Sobic010G014900 Sobic003G390300--Sobic010G014900 Sobic007G158400 Sobic007G158400 Sobic003G390300--Sobic007G158400 Sobic003G390300--Sobic001G137200 Sobic009G028600 Sobic009G028600 Sobic003G390300--Sobic009G028600 Sobic003G104900--Sobic005G209800 Sobic003G104900--Sobic001G483700 Sobic008G002100 Sobic008G002100 Sobic003G104900--Sobic008G002100 Sobic008G023000 Sobic008G023000 Sobic003G104900--Sobic008G023000 Sobic001G527400 Sobic001G527400 Sobic003G104900--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic003G104900--Sobic007G183000 Sobic005G231800 Sobic005G231800 Sobic003G104900--Sobic005G231800 Sobic004G226300 Sobic004G226300 Sobic003G104900--Sobic004G226300 Sobic006G171000 Sobic006G171000 Sobic003G104900--Sobic006G171000 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic010G087200--Sobic007G206700 Sobic001G428700 Sobic001G428700 Sobic010G087200--Sobic001G428700 Sobic010G087200--Sobic010G014300 Sobic010G087200--Sobic001G494150 Sobic010G087200--Sobic006G166700 Sobic010G087200--Sobic010G119600 Sobic002G366700 Sobic002G366700 Sobic010G087200--Sobic002G366700 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic001G062700--Sobic010G119600 Sobic001G062700--Sobic010G259200 Sobic001G062700--Sobic007G206700 Sobic001G062700--Sobic010G014900 Sobic001G062700--Sobic004G107400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.