Gene annotation
Transcriptome id Sobic.003G083700.1
Synonym Sb03g007050
Functional annotation DNA binding protein, putative, expressed
UniProt C5XQT8
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G10280 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os01g04220.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a023583 , Zm00025a023582 , Zm00025a035572
Brachypodium -
Barley HORVU0Hr1G010000.3 , HORVU0Hr1G010000.2 , HORVU3Hr1G007160.1 , HORVU0Hr1G010000.4
Wheat TraesCS5D02G015600 , TraesCS3B02G046900 , TraesCS5B02G008600 , TraesCS5B02G008600 , TraesCS3A02G037000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
2 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
4 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
5 Sobic.001G483700 Cupin domain containing protein, expressed -
6 Sobic.010G002850 - -
7 Sobic.005G209800 nodulin, putative, expressed -
8 Sobic.003G390300 expressed protein -
9 Sobic.001G402701 - -
10 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
11 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
12 Sobic.008G023000 expressed protein -
13 Sobic.001G527400 - -
14 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I
15 Sobic.004G226300 expressed protein -
16 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
18 Sobic.002G048250 - -
19 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
20 Sobic.003G173032 - -


Gene co-expression network
sample Sobic003G083700 Sobic003G083700 Sobic003G104900 Sobic003G104900 Sobic003G083700--Sobic003G104900 Sobic010G259200 Sobic010G259200 Sobic003G083700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic003G083700--Sobic007G206700 Sobic002G001300 Sobic002G001300 Sobic003G083700--Sobic002G001300 Sobic001G483700 Sobic001G483700 Sobic003G083700--Sobic001G483700 Sobic010G002850 Sobic010G002850 Sobic003G083700--Sobic010G002850 Sobic005G209800 Sobic005G209800 Sobic003G083700--Sobic005G209800 Sobic003G390300 Sobic003G390300 Sobic003G083700--Sobic003G390300 Sobic001G402701 Sobic001G402701 Sobic003G083700--Sobic001G402701 Sobic003G104900--Sobic005G209800 Sobic003G104900--Sobic001G483700 Sobic008G002100 Sobic008G002100 Sobic003G104900--Sobic008G002100 Sobic008G023000 Sobic008G023000 Sobic003G104900--Sobic008G023000 Sobic001G527400 Sobic001G527400 Sobic003G104900--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic003G104900--Sobic007G183000 Sobic005G231800 Sobic005G231800 Sobic003G104900--Sobic005G231800 Sobic004G226300 Sobic004G226300 Sobic003G104900--Sobic004G226300 Sobic006G171000 Sobic006G171000 Sobic003G104900--Sobic006G171000 Sobic010G259200--Sobic007G206700 Sobic010G259200--Sobic002G001300 Sobic010G119600 Sobic010G119600 Sobic010G259200--Sobic010G119600 Sobic010G259200--Sobic003G083700 Sobic010G259200--Sobic001G402701 Sobic010G259200--Sobic003G104900 Sobic010G259200--Sobic003G390300 Sobic010G259200--Sobic010G002850 Sobic010G014300 Sobic010G014300 Sobic010G259200--Sobic010G014300 Sobic007G206700--Sobic010G259200 Sobic007G206700--Sobic002G001300 Sobic007G206700--Sobic003G083700 Sobic007G206700--Sobic010G119600 Sobic007G206700--Sobic001G402701 Sobic007G206700--Sobic003G390300 Sobic007G206700--Sobic003G104900 Sobic010G087200 Sobic010G087200 Sobic007G206700--Sobic010G087200 Sobic001G062700 Sobic001G062700 Sobic007G206700--Sobic001G062700 Sobic002G001300--Sobic010G259200 Sobic002G001300--Sobic007G206700 Sobic002G001300--Sobic003G083700 Sobic002G001300--Sobic010G087200 Sobic002G001300--Sobic010G119600 Sobic002G001300--Sobic001G402701 Sobic001G494150 Sobic001G494150 Sobic002G001300--Sobic001G494150 Sobic002G001300--Sobic003G104900 Sobic006G166700 Sobic006G166700 Sobic002G001300--Sobic006G166700 Sobic001G483700--Sobic004G226300 Sobic001G483700--Sobic007G183000 Sobic001G483700--Sobic005G209800 Sobic001G137200 Sobic001G137200 Sobic001G483700--Sobic001G137200 Sobic002G285525 Sobic002G285525 Sobic001G483700--Sobic002G285525 Sobic001G483700--Sobic001G527400 Sobic001G483700--Sobic008G002100 Sobic001G483700--Sobic003G104900 Sobic001G483700--Sobic008G023000 Sobic010G002850--Sobic005G209800 Sobic010G002850--Sobic008G023000 Sobic010G002850--Sobic008G002100 Sobic010G002850--Sobic004G226300 Sobic010G002850--Sobic001G527400 Sobic010G002850--Sobic007G183000 Sobic010G002850--Sobic006G171000 Sobic005G156700 Sobic005G156700 Sobic010G002850--Sobic005G156700 Sobic010G002850--Sobic005G231800 Sobic005G209800--Sobic008G002100 Sobic005G209800--Sobic008G023000 Sobic005G209800--Sobic001G527400 Sobic005G209800--Sobic007G183000 Sobic005G209800--Sobic004G226300 Sobic005G209800--Sobic005G231800 Sobic005G209800--Sobic006G171000 Sobic003G173032 Sobic003G173032 Sobic005G209800--Sobic003G173032 Sobic002G048250 Sobic002G048250 Sobic005G209800--Sobic002G048250 Sobic004G107400 Sobic004G107400 Sobic003G390300--Sobic004G107400 Sobic004G061600 Sobic004G061600 Sobic003G390300--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G390300--Sobic003G104900 Sobic010G014900 Sobic010G014900 Sobic003G390300--Sobic010G014900 Sobic007G158400 Sobic007G158400 Sobic003G390300--Sobic007G158400 Sobic003G390300--Sobic001G137200 Sobic009G028600 Sobic009G028600 Sobic003G390300--Sobic009G028600 Sobic001G148600 Sobic001G148600 Sobic001G402701--Sobic001G148600 Sobic001G402701--Sobic010G259200 Sobic001G402701--Sobic003G083700 Sobic001G402701--Sobic007G206700 Sobic001G402701--Sobic003G104900 Sobic001G402701--Sobic010G002850 Sobic001G402701--Sobic003G390300 Sobic001G402701--Sobic010G119600 Sobic003G142900 Sobic003G142900 Sobic001G402701--Sobic003G142900
Octagon: transcription factors


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