Gene annotation
Transcriptome id Sobic.003G173032.1
Synonym -
Functional annotation -
UniProt A0A1W0VXQ9
Pfam PF00507
Panther DB PTHR11058 PTHR11058:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008137; NADH dehydrogenase (ubiquinone) activity


Orthologs (automatic annotation)
TAIR ATCG00440 : NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein
RAP-DB (Rice) LOC_Os10g38206.1 : NADPH-dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a057672 , Zm00025a057584 , Zm00025a057752 , Zm00025a057614 , Zm00025a057710
Brachypodium KQK05577 , PNT76497 , PNT75854 , PNT61990 , KQK04350
Barley HORVU0Hr1G036360.2 , HORVU0Hr1G036360.1 , HORVU7Hr1G051200.2 , HORVU5Hr1G064680.3 , HORVU5Hr1G064680.2 , HORVU0Hr1G030770.2 , HORVU0Hr1G030770.1 , HORVU6Hr1G049240.3 , HORVU6Hr1G049240.2 , HORVU0Hr1G031450.1 , HORVU0Hr1G032820.2 , HORVU0Hr1G033070.1 , HORVU0Hr1G033810.2 , HORVU0Hr1G033810.1 , HORVU7Hr1G065860.1 , HORVU0Hr1G032820.1 , AGP50760 , HORVU0Hr1G036850.2 , HORVU0Hr1G028480.1 , HORVU0Hr1G028480.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G023000 expressed protein -
2 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
3 Sobic.001G527400 - -
4 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.004G226300 expressed protein -
6 Sobic.005G209800 nodulin, putative, expressed -
7 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I
8 Sobic.002G048250 - -
9 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
10 Sobic.004G224300 5-azacytidine resistance protein related, putative, expressed -
11 Sobic.002G285525 - -
12 Sobic.003G290700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
13 Sobic.004G089700 - -
14 Sobic.003G337700 WRKY20, expressed -
15 Sobic.005G156700 laccase precursor protein, putative, expressed -
16 Sobic.002G173600 UDP-glucoronosyl/UDP-glucosyl transferase family protein, putative, expressed -
17 Sobic.010G002850 - -
18 Sobic.009G223700 - -
19 Sobic.004G347866 - -
20 Sobic.001G137200 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic003G173032 Sobic003G173032 Sobic008G023000 Sobic008G023000 Sobic003G173032--Sobic008G023000 Sobic008G002100 Sobic008G002100 Sobic003G173032--Sobic008G002100 Sobic001G527400 Sobic001G527400 Sobic003G173032--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic003G173032--Sobic007G183000 Sobic004G226300 Sobic004G226300 Sobic003G173032--Sobic004G226300 Sobic005G209800 Sobic005G209800 Sobic003G173032--Sobic005G209800 Sobic005G231800 Sobic005G231800 Sobic003G173032--Sobic005G231800 Sobic002G048250 Sobic002G048250 Sobic003G173032--Sobic002G048250 Sobic006G171000 Sobic006G171000 Sobic003G173032--Sobic006G171000 Sobic008G023000--Sobic008G002100 Sobic008G023000--Sobic001G527400 Sobic008G023000--Sobic007G183000 Sobic008G023000--Sobic005G209800 Sobic008G023000--Sobic004G226300 Sobic008G023000--Sobic003G173032 Sobic008G023000--Sobic005G231800 Sobic008G023000--Sobic002G048250 Sobic008G023000--Sobic006G171000 Sobic008G002100--Sobic008G023000 Sobic008G002100--Sobic001G527400 Sobic008G002100--Sobic005G209800 Sobic008G002100--Sobic007G183000 Sobic008G002100--Sobic004G226300 Sobic008G002100--Sobic005G231800 Sobic008G002100--Sobic003G173032 Sobic008G002100--Sobic002G048250 Sobic008G002100--Sobic006G171000 Sobic001G527400--Sobic008G023000 Sobic001G527400--Sobic008G002100 Sobic001G527400--Sobic007G183000 Sobic001G527400--Sobic004G226300 Sobic001G527400--Sobic002G048250 Sobic001G527400--Sobic005G209800 Sobic001G527400--Sobic005G231800 Sobic001G527400--Sobic003G173032 Sobic001G527400--Sobic006G171000 Sobic007G183000--Sobic004G226300 Sobic007G183000--Sobic001G527400 Sobic007G183000--Sobic002G048250 Sobic007G183000--Sobic008G023000 Sobic007G183000--Sobic008G002100 Sobic007G183000--Sobic005G231800 Sobic007G183000--Sobic005G209800 Sobic007G183000--Sobic003G173032 Sobic007G183000--Sobic006G171000 Sobic004G226300--Sobic007G183000 Sobic004G226300--Sobic001G527400 Sobic004G226300--Sobic008G023000 Sobic004G226300--Sobic008G002100 Sobic004G226300--Sobic002G048250 Sobic004G226300--Sobic005G231800 Sobic004G226300--Sobic005G209800 Sobic004G226300--Sobic006G171000 Sobic004G226300--Sobic003G173032 Sobic005G209800--Sobic008G002100 Sobic005G209800--Sobic008G023000 Sobic005G209800--Sobic001G527400 Sobic005G209800--Sobic007G183000 Sobic005G209800--Sobic004G226300 Sobic005G209800--Sobic005G231800 Sobic005G209800--Sobic006G171000 Sobic005G209800--Sobic003G173032 Sobic005G209800--Sobic002G048250 Sobic005G231800--Sobic008G023000 Sobic005G231800--Sobic001G527400 Sobic005G231800--Sobic008G002100 Sobic005G231800--Sobic007G183000 Sobic005G231800--Sobic004G226300 Sobic005G231800--Sobic005G209800 Sobic005G231800--Sobic002G048250 Sobic005G231800--Sobic003G173032 Sobic005G231800--Sobic006G171000 Sobic002G048250--Sobic007G183000 Sobic002G048250--Sobic001G527400 Sobic002G048250--Sobic004G226300 Sobic002G048250--Sobic008G023000 Sobic002G048250--Sobic008G002100 Sobic002G048250--Sobic005G231800 Sobic002G048250--Sobic005G209800 Sobic002G048250--Sobic003G173032 Sobic004G224300 Sobic004G224300 Sobic002G048250--Sobic004G224300 Sobic006G171000--Sobic008G023000 Sobic006G171000--Sobic004G226300 Sobic006G171000--Sobic008G002100 Sobic006G171000--Sobic007G183000 Sobic006G171000--Sobic001G527400 Sobic006G171000--Sobic005G209800 Sobic006G171000--Sobic005G231800 Sobic006G171000--Sobic003G173032 Sobic006G171000--Sobic002G048250
Octagon: transcription factors


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