Gene annotation
Transcriptome id Sobic.002G001300.3
Synonym Sb02g000300, LAC7
Functional annotation laccase precursor protein, putative, expressed
UniProt A0A1W0W1N1
Pfam PF00394 PF07731
Panther DB PTHR11709 PTHR11709:SF111
NCBI CDD KOG1263; Multicopper oxidases
KEGG Orthology K05909; laccase
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT3G09220 : laccase 7
RAP-DB (Rice) LOC_Os07g01110.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a054092 , Zm00025a026896 , Zm00025a044821 , Zm00025a026839
Brachypodium KQK13503 , KQK10592 , PNT73207
Barley HORVU1Hr1G008360.1 , HORVU2Hr1G065040.1 , HORVU2Hr1G065040.2 , HORVU1Hr1G008360.8 , HORVU1Hr1G008360.9 , HORVU1Hr1G008360.2 , HORVU1Hr1G008360.6 , HORVU1Hr1G008360.7 , HORVU1Hr1G008360.4 , HORVU1Hr1G008360.5 , HORVU3Hr1G085520.5 , HORVU3Hr1G085520.4 , HORVU3Hr1G085520.7 , HORVU3Hr1G085520.6 , HORVU3Hr1G085520.1 , HORVU3Hr1G085520.3 , HORVU3Hr1G085520.2 , HORVU3Hr1G085520.9 , HORVU3Hr1G085520.8 , HORVU2Hr1G065040.3 , HORVU1Hr1G008360.3
Wheat TraesCS1D02G044600 , TraesCS2D02G267200 , TraesCS2A02G255500 , TraesCS3D02G358600 , TraesCS3B02G397300 , TraesCS1B02G056900 , TraesCS3D02G358500 , TraesCS1D02G044300 , TraesCS3A02G365300 , TraesCS1A02G043900 , TraesCS2B02G287000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
3 Sobic.003G083700 DNA binding protein, putative, expressed -
4 Sobic.010G087200 expressed protein -
5 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
6 Sobic.001G402701 - -
7 Sobic.001G494150 - -
8 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
9 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.010G002850 - -
11 Sobic.010G014300 expressed protein -
12 Sobic.001G104400 expressed protein -
13 Sobic.001G483700 Cupin domain containing protein, expressed -
14 Sobic.005G209800 nodulin, putative, expressed -
15 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
16 Sobic.009G236500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G390300 expressed protein -
18 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
19 Sobic.009G187000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
20 Sobic.008G023000 expressed protein -


Gene co-expression network
sample Sobic002G001300 Sobic002G001300 Sobic010G259200 Sobic010G259200 Sobic002G001300--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic002G001300--Sobic007G206700 Sobic003G083700 Sobic003G083700 Sobic002G001300--Sobic003G083700 Sobic010G087200 Sobic010G087200 Sobic002G001300--Sobic010G087200 Sobic010G119600 Sobic010G119600 Sobic002G001300--Sobic010G119600 Sobic001G402701 Sobic001G402701 Sobic002G001300--Sobic001G402701 Sobic001G494150 Sobic001G494150 Sobic002G001300--Sobic001G494150 Sobic003G104900 Sobic003G104900 Sobic002G001300--Sobic003G104900 Sobic006G166700 Sobic006G166700 Sobic002G001300--Sobic006G166700 Sobic010G259200--Sobic007G206700 Sobic010G259200--Sobic002G001300 Sobic010G259200--Sobic010G119600 Sobic010G259200--Sobic003G083700 Sobic010G259200--Sobic001G402701 Sobic010G259200--Sobic003G104900 Sobic003G390300 Sobic003G390300 Sobic010G259200--Sobic003G390300 Sobic010G002850 Sobic010G002850 Sobic010G259200--Sobic010G002850 Sobic010G014300 Sobic010G014300 Sobic010G259200--Sobic010G014300 Sobic007G206700--Sobic010G259200 Sobic007G206700--Sobic002G001300 Sobic007G206700--Sobic003G083700 Sobic007G206700--Sobic010G119600 Sobic007G206700--Sobic001G402701 Sobic007G206700--Sobic003G390300 Sobic007G206700--Sobic003G104900 Sobic007G206700--Sobic010G087200 Sobic001G062700 Sobic001G062700 Sobic007G206700--Sobic001G062700 Sobic003G083700--Sobic003G104900 Sobic003G083700--Sobic010G259200 Sobic003G083700--Sobic007G206700 Sobic003G083700--Sobic002G001300 Sobic001G483700 Sobic001G483700 Sobic003G083700--Sobic001G483700 Sobic003G083700--Sobic010G002850 Sobic005G209800 Sobic005G209800 Sobic003G083700--Sobic005G209800 Sobic003G083700--Sobic003G390300 Sobic003G083700--Sobic001G402701 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic010G087200--Sobic007G206700 Sobic001G428700 Sobic001G428700 Sobic010G087200--Sobic001G428700 Sobic010G087200--Sobic010G014300 Sobic010G087200--Sobic001G494150 Sobic010G087200--Sobic006G166700 Sobic010G087200--Sobic010G119600 Sobic002G366700 Sobic002G366700 Sobic010G087200--Sobic002G366700 Sobic010G119600--Sobic010G259200 Sobic010G119600--Sobic001G483700 Sobic010G119600--Sobic003G390300 Sobic001G137200 Sobic001G137200 Sobic010G119600--Sobic001G137200 Sobic010G119600--Sobic010G002850 Sobic010G119600--Sobic007G206700 Sobic010G119600--Sobic003G104900 Sobic010G119600--Sobic001G062700 Sobic010G119600--Sobic003G083700 Sobic001G148600 Sobic001G148600 Sobic001G402701--Sobic001G148600 Sobic001G402701--Sobic010G259200 Sobic001G402701--Sobic003G083700 Sobic001G402701--Sobic007G206700 Sobic001G402701--Sobic003G104900 Sobic001G402701--Sobic010G002850 Sobic001G402701--Sobic003G390300 Sobic001G402701--Sobic010G119600 Sobic003G142900 Sobic003G142900 Sobic001G402701--Sobic003G142900 Sobic006G075700 Sobic006G075700 Sobic001G494150--Sobic006G075700 Sobic001G494150--Sobic010G259200 Sobic001G494150--Sobic010G119600 Sobic009G236500 Sobic009G236500 Sobic001G494150--Sobic009G236500 Sobic001G494150--Sobic002G001300 Sobic001G494150--Sobic002G366700 Sobic001G494150--Sobic010G002850 Sobic001G494150--Sobic010G087200 Sobic005G156700 Sobic005G156700 Sobic001G494150--Sobic005G156700 Sobic003G104900--Sobic005G209800 Sobic003G104900--Sobic001G483700 Sobic008G002100 Sobic008G002100 Sobic003G104900--Sobic008G002100 Sobic008G023000 Sobic008G023000 Sobic003G104900--Sobic008G023000 Sobic001G527400 Sobic001G527400 Sobic003G104900--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic003G104900--Sobic007G183000 Sobic005G231800 Sobic005G231800 Sobic003G104900--Sobic005G231800 Sobic004G226300 Sobic004G226300 Sobic003G104900--Sobic004G226300 Sobic006G171000 Sobic006G171000 Sobic003G104900--Sobic006G171000 Sobic006G166700--Sobic010G014300 Sobic001G005000 Sobic001G005000 Sobic006G166700--Sobic001G005000 Sobic006G166700--Sobic010G087200 Sobic006G166700--Sobic002G001300 Sobic004G288400 Sobic004G288400 Sobic006G166700--Sobic004G288400 Sobic001G239400 Sobic001G239400 Sobic006G166700--Sobic001G239400 Sobic006G166700--Sobic010G259200 Sobic010G194500 Sobic010G194500 Sobic006G166700--Sobic010G194500 Sobic009G076800 Sobic009G076800 Sobic006G166700--Sobic009G076800
Octagon: transcription factors


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