Gene annotation
Transcriptome id Sobic.006G166700.1,Sobic.006G166700.2
Synonym Sb06g024260
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5YD44 , A0A1Z5RE97
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF70
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G07475 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os04g46120.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a010355
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G014300 expressed protein -
2 Sobic.001G005000 receptor protein kinase, putative, expressed -
3 Sobic.010G087200 expressed protein -
4 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
5 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
6 Sobic.001G239400 hsp20/alpha crystallin family protein, putative, expressed -
7 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
8 Sobic.010G194500 expansin precursor, putative, expressed -
9 Sobic.009G076800 GIL1, putative, expressed -
10 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
11 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
12 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.005G198300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G249700 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
16 Sobic.010G008000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.001G494150 - -
18 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
19 Sobic.002G339400 expressed protein -
20 Sobic.006G257100 dirigent-like protein pDIR17, putative, expressed -


Gene co-expression network
sample Sobic006G166700 Sobic006G166700 Sobic010G014300 Sobic010G014300 Sobic006G166700--Sobic010G014300 Sobic001G005000 Sobic001G005000 Sobic006G166700--Sobic001G005000 Sobic010G087200 Sobic010G087200 Sobic006G166700--Sobic010G087200 Sobic002G001300 Sobic002G001300 Sobic006G166700--Sobic002G001300 Sobic004G288400 Sobic004G288400 Sobic006G166700--Sobic004G288400 Sobic001G239400 Sobic001G239400 Sobic006G166700--Sobic001G239400 Sobic010G259200 Sobic010G259200 Sobic006G166700--Sobic010G259200 Sobic010G194500 Sobic010G194500 Sobic006G166700--Sobic010G194500 Sobic009G076800 Sobic009G076800 Sobic006G166700--Sobic009G076800 Sobic010G014300--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic010G014300--Sobic010G119600 Sobic010G014300--Sobic010G087200 Sobic010G014300--Sobic006G166700 Sobic007G206700 Sobic007G206700 Sobic010G014300--Sobic007G206700 Sobic010G014300--Sobic002G001300 Sobic001G062700 Sobic001G062700 Sobic010G014300--Sobic001G062700 Sobic007G092300 Sobic007G092300 Sobic010G014300--Sobic007G092300 Sobic010G014300--Sobic001G005000 Sobic001G005000--Sobic010G194500 Sobic001G005000--Sobic009G076800 Sobic001G005000--Sobic006G166700 Sobic001G005000--Sobic001G239400 Sobic006G018900 Sobic006G018900 Sobic001G005000--Sobic006G018900 Sobic004G249700 Sobic004G249700 Sobic001G005000--Sobic004G249700 Sobic001G005000--Sobic010G014300 Sobic007G133600 Sobic007G133600 Sobic001G005000--Sobic007G133600 Sobic001G462100 Sobic001G462100 Sobic001G005000--Sobic001G462100 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic010G087200--Sobic007G206700 Sobic001G428700 Sobic001G428700 Sobic010G087200--Sobic001G428700 Sobic010G087200--Sobic010G014300 Sobic001G494150 Sobic001G494150 Sobic010G087200--Sobic001G494150 Sobic010G087200--Sobic006G166700 Sobic010G087200--Sobic010G119600 Sobic002G366700 Sobic002G366700 Sobic010G087200--Sobic002G366700 Sobic002G001300--Sobic010G259200 Sobic002G001300--Sobic007G206700 Sobic003G083700 Sobic003G083700 Sobic002G001300--Sobic003G083700 Sobic002G001300--Sobic010G087200 Sobic002G001300--Sobic010G119600 Sobic001G402701 Sobic001G402701 Sobic002G001300--Sobic001G402701 Sobic002G001300--Sobic001G494150 Sobic003G104900 Sobic003G104900 Sobic002G001300--Sobic003G104900 Sobic002G001300--Sobic006G166700 Sobic004G288400--Sobic006G166700 Sobic004G288400--Sobic010G014300 Sobic005G198300 Sobic005G198300 Sobic004G288400--Sobic005G198300 Sobic004G288400--Sobic001G239400 Sobic002G339400 Sobic002G339400 Sobic004G288400--Sobic002G339400 Sobic004G288400--Sobic010G087200 Sobic004G288400--Sobic001G428700 Sobic004G288400--Sobic007G133600 Sobic004G288400--Sobic001G005000 Sobic001G239400--Sobic001G005000 Sobic001G239400--Sobic007G133600 Sobic001G239400--Sobic004G249700 Sobic001G239400--Sobic006G166700 Sobic001G239400--Sobic004G288400 Sobic009G008300 Sobic009G008300 Sobic001G239400--Sobic009G008300 Sobic001G239400--Sobic009G076800 Sobic001G239400--Sobic010G194500 Sobic006G003000 Sobic006G003000 Sobic001G239400--Sobic006G003000 Sobic010G259200--Sobic007G206700 Sobic010G259200--Sobic002G001300 Sobic010G259200--Sobic010G119600 Sobic010G259200--Sobic003G083700 Sobic010G259200--Sobic001G402701 Sobic010G259200--Sobic003G104900 Sobic003G390300 Sobic003G390300 Sobic010G259200--Sobic003G390300 Sobic010G002850 Sobic010G002850 Sobic010G259200--Sobic010G002850 Sobic010G259200--Sobic010G014300 Sobic010G194500--Sobic001G005000 Sobic004G153700 Sobic004G153700 Sobic010G194500--Sobic004G153700 Sobic010G194500--Sobic006G018900 Sobic003G226100 Sobic003G226100 Sobic010G194500--Sobic003G226100 Sobic009G204800 Sobic009G204800 Sobic010G194500--Sobic009G204800 Sobic010G194500--Sobic009G076800 Sobic010G008000 Sobic010G008000 Sobic010G194500--Sobic010G008000 Sobic010G194500--Sobic007G206700 Sobic010G194500--Sobic004G249700 Sobic009G076800--Sobic001G005000 Sobic009G076800--Sobic010G194500 Sobic002G005200 Sobic002G005200 Sobic009G076800--Sobic002G005200 Sobic009G076800--Sobic006G018900 Sobic006G257100 Sobic006G257100 Sobic009G076800--Sobic006G257100 Sobic009G076800--Sobic006G166700 Sobic009G076800--Sobic004G249700 Sobic009G076800--Sobic001G239400 Sobic009G076800--Sobic010G014300
Octagon: transcription factors


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