Gene annotation
Transcriptome id Sobic.001G428700.1
Synonym SbERF7, Sb01g040280,ethylene response factor 7
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5WQ67
Pfam PF00847
Panther DB PTHR31985 PTHR31985:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G21910 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g15660.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001699 , Zm00025a049596 , Zm00025a057002 , Zm00025a052815 , Zm00025a009843
Brachypodium KQK22459 , PNT61818 , KQK19045
Barley HORVU6Hr1G080340.12 , HORVU4Hr1G061340.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G087200 expressed protein -
2 Sobic.001G494150 - -
3 Sobic.002G339400 expressed protein -
4 Sobic.010G014300 expressed protein -
5 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
6 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.002G366700 expressed protein -
8 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.002G348900 cytochrome P450, putative, expressed -
10 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
11 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
13 Sobic.004G087100 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
14 Sobic.009G236500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G075700 expressed protein -
16 Sobic.001G402701 - -
17 Sobic.002G282100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
18 Sobic.002G038400 expressed protein -
19 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
20 Sobic.010G099600 expressed protein -


Gene co-expression network
sample Sobic001G428700 Sobic001G428700 Sobic010G087200 Sobic010G087200 Sobic001G428700--Sobic010G087200 Sobic001G494150 Sobic001G494150 Sobic001G428700--Sobic001G494150 Sobic002G339400 Sobic002G339400 Sobic001G428700--Sobic002G339400 Sobic010G014300 Sobic010G014300 Sobic001G428700--Sobic010G014300 Sobic002G001300 Sobic002G001300 Sobic001G428700--Sobic002G001300 Sobic006G166700 Sobic006G166700 Sobic001G428700--Sobic006G166700 Sobic002G366700 Sobic002G366700 Sobic001G428700--Sobic002G366700 Sobic010G259200 Sobic010G259200 Sobic001G428700--Sobic010G259200 Sobic002G348900 Sobic002G348900 Sobic001G428700--Sobic002G348900 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic010G087200--Sobic007G206700 Sobic010G087200--Sobic001G428700 Sobic010G087200--Sobic010G014300 Sobic010G087200--Sobic001G494150 Sobic010G087200--Sobic006G166700 Sobic010G119600 Sobic010G119600 Sobic010G087200--Sobic010G119600 Sobic010G087200--Sobic002G366700 Sobic006G075700 Sobic006G075700 Sobic001G494150--Sobic006G075700 Sobic001G494150--Sobic010G259200 Sobic001G494150--Sobic010G119600 Sobic009G236500 Sobic009G236500 Sobic001G494150--Sobic009G236500 Sobic001G494150--Sobic002G001300 Sobic001G494150--Sobic002G366700 Sobic010G002850 Sobic010G002850 Sobic001G494150--Sobic010G002850 Sobic001G494150--Sobic010G087200 Sobic005G156700 Sobic005G156700 Sobic001G494150--Sobic005G156700 Sobic002G339400--Sobic002G366700 Sobic002G339400--Sobic001G494150 Sobic002G339400--Sobic010G087200 Sobic002G339400--Sobic001G428700 Sobic004G288400 Sobic004G288400 Sobic002G339400--Sobic004G288400 Sobic002G339400--Sobic010G014300 Sobic002G339400--Sobic006G075700 Sobic002G339400--Sobic006G166700 Sobic002G339400--Sobic010G259200 Sobic010G014300--Sobic010G259200 Sobic010G014300--Sobic010G119600 Sobic010G014300--Sobic010G087200 Sobic010G014300--Sobic006G166700 Sobic010G014300--Sobic007G206700 Sobic010G014300--Sobic002G001300 Sobic001G062700 Sobic001G062700 Sobic010G014300--Sobic001G062700 Sobic007G092300 Sobic007G092300 Sobic010G014300--Sobic007G092300 Sobic001G005000 Sobic001G005000 Sobic010G014300--Sobic001G005000 Sobic002G001300--Sobic010G259200 Sobic002G001300--Sobic007G206700 Sobic003G083700 Sobic003G083700 Sobic002G001300--Sobic003G083700 Sobic002G001300--Sobic010G087200 Sobic002G001300--Sobic010G119600 Sobic001G402701 Sobic001G402701 Sobic002G001300--Sobic001G402701 Sobic002G001300--Sobic001G494150 Sobic003G104900 Sobic003G104900 Sobic002G001300--Sobic003G104900 Sobic002G001300--Sobic006G166700 Sobic006G166700--Sobic010G014300 Sobic006G166700--Sobic001G005000 Sobic006G166700--Sobic010G087200 Sobic006G166700--Sobic002G001300 Sobic006G166700--Sobic004G288400 Sobic001G239400 Sobic001G239400 Sobic006G166700--Sobic001G239400 Sobic006G166700--Sobic010G259200 Sobic010G194500 Sobic010G194500 Sobic006G166700--Sobic010G194500 Sobic009G076800 Sobic009G076800 Sobic006G166700--Sobic009G076800 Sobic002G366700--Sobic001G494150 Sobic002G366700--Sobic002G339400 Sobic002G366700--Sobic010G087200 Sobic002G366700--Sobic006G075700 Sobic002G058600 Sobic002G058600 Sobic002G366700--Sobic002G058600 Sobic001G513100 Sobic001G513100 Sobic002G366700--Sobic001G513100 Sobic002G366700--Sobic010G259200 Sobic002G366700--Sobic010G119600 Sobic002G366700--Sobic001G428700 Sobic010G259200--Sobic007G206700 Sobic010G259200--Sobic002G001300 Sobic010G259200--Sobic010G119600 Sobic010G259200--Sobic003G083700 Sobic010G259200--Sobic001G402701 Sobic010G259200--Sobic003G104900 Sobic003G390300 Sobic003G390300 Sobic010G259200--Sobic003G390300 Sobic010G259200--Sobic010G002850 Sobic010G259200--Sobic010G014300 Sobic002G348900--Sobic001G428700 Sobic004G087100 Sobic004G087100 Sobic002G348900--Sobic004G087100 Sobic007G156700 Sobic007G156700 Sobic002G348900--Sobic007G156700 Sobic010G099600 Sobic010G099600 Sobic002G348900--Sobic010G099600 Sobic005G075900 Sobic005G075900 Sobic002G348900--Sobic005G075900 Sobic006G137500 Sobic006G137500 Sobic002G348900--Sobic006G137500 Sobic002G348900--Sobic001G494150 Sobic002G348900--Sobic010G087200 Sobic002G348900--Sobic002G339400
Octagon: transcription factors


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