Gene annotation
Transcriptome id Sobic.002G038400.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0W277
Pfam PF07802
Panther DB PTHR34357 PTHR34357:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14060 : GCK domain-containing protein
RAP-DB (Rice) LOC_Os07g06460.1 : expressed protein
MaizeGDB (Corn) Zm00025a017248 , Zm00025a045045
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G076800 B3 DNA binding domain containing protein, expressed -
2 Sobic.002G366700 expressed protein -
3 Sobic.002G339400 expressed protein -
4 Sobic.010G087200 expressed protein -
5 Sobic.001G494150 - -
6 Sobic.002G282100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
7 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
8 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
9 Sobic.006G186200 exostosin family domain containing protein, expressed -
10 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
12 Sobic.004G063750 - -
13 Sobic.006G075700 expressed protein -
14 Sobic.004G097700 homeobox domain containing protein, expressed -
15 Sobic.002G058600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsFBX237 - F-box domain containing protein, expressed -
16 Sobic.009G236500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
18 Sobic.010G014300 expressed protein -
19 Sobic.004G156600 - -
20 Sobic.003G390300 expressed protein -


Gene co-expression network
sample Sobic002G038400 Sobic002G038400 Sobic007G076800 Sobic007G076800 Sobic002G038400--Sobic007G076800 Sobic002G366700 Sobic002G366700 Sobic002G038400--Sobic002G366700 Sobic002G339400 Sobic002G339400 Sobic002G038400--Sobic002G339400 Sobic010G087200 Sobic010G087200 Sobic002G038400--Sobic010G087200 Sobic001G494150 Sobic001G494150 Sobic002G038400--Sobic001G494150 Sobic002G282100 Sobic002G282100 Sobic002G038400--Sobic002G282100 Sobic007G206700 Sobic007G206700 Sobic002G038400--Sobic007G206700 Sobic001G428700 Sobic001G428700 Sobic002G038400--Sobic001G428700 Sobic006G186200 Sobic006G186200 Sobic002G038400--Sobic006G186200 Sobic003G390300 Sobic003G390300 Sobic007G076800--Sobic003G390300 Sobic004G061600 Sobic004G061600 Sobic007G076800--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic007G076800--Sobic004G107400 Sobic008G136900 Sobic008G136900 Sobic007G076800--Sobic008G136900 Sobic009G005800 Sobic009G005800 Sobic007G076800--Sobic009G005800 Sobic001G062700 Sobic001G062700 Sobic007G076800--Sobic001G062700 Sobic002G010500 Sobic002G010500 Sobic007G076800--Sobic002G010500 Sobic010G119600 Sobic010G119600 Sobic007G076800--Sobic010G119600 Sobic007G076800--Sobic007G206700 Sobic002G366700--Sobic001G494150 Sobic002G366700--Sobic002G339400 Sobic002G366700--Sobic010G087200 Sobic006G075700 Sobic006G075700 Sobic002G366700--Sobic006G075700 Sobic002G058600 Sobic002G058600 Sobic002G366700--Sobic002G058600 Sobic001G513100 Sobic001G513100 Sobic002G366700--Sobic001G513100 Sobic010G259200 Sobic010G259200 Sobic002G366700--Sobic010G259200 Sobic002G366700--Sobic010G119600 Sobic002G366700--Sobic001G428700 Sobic002G339400--Sobic002G366700 Sobic002G339400--Sobic001G494150 Sobic002G339400--Sobic010G087200 Sobic002G339400--Sobic001G428700 Sobic004G288400 Sobic004G288400 Sobic002G339400--Sobic004G288400 Sobic010G014300 Sobic010G014300 Sobic002G339400--Sobic010G014300 Sobic002G339400--Sobic006G075700 Sobic006G166700 Sobic006G166700 Sobic002G339400--Sobic006G166700 Sobic002G339400--Sobic010G259200 Sobic002G001300 Sobic002G001300 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic010G087200--Sobic007G206700 Sobic010G087200--Sobic001G428700 Sobic010G087200--Sobic010G014300 Sobic010G087200--Sobic001G494150 Sobic010G087200--Sobic006G166700 Sobic010G087200--Sobic010G119600 Sobic010G087200--Sobic002G366700 Sobic001G494150--Sobic006G075700 Sobic001G494150--Sobic010G259200 Sobic001G494150--Sobic010G119600 Sobic009G236500 Sobic009G236500 Sobic001G494150--Sobic009G236500 Sobic001G494150--Sobic002G001300 Sobic001G494150--Sobic002G366700 Sobic010G002850 Sobic010G002850 Sobic001G494150--Sobic010G002850 Sobic001G494150--Sobic010G087200 Sobic005G156700 Sobic005G156700 Sobic001G494150--Sobic005G156700 Sobic009G190400 Sobic009G190400 Sobic002G282100--Sobic009G190400 Sobic003G040100 Sobic003G040100 Sobic002G282100--Sobic003G040100 Sobic002G282100--Sobic004G061600 Sobic002G282100--Sobic001G062700 Sobic004G156600 Sobic004G156600 Sobic002G282100--Sobic004G156600 Sobic006G155900 Sobic006G155900 Sobic002G282100--Sobic006G155900 Sobic005G168500 Sobic005G168500 Sobic002G282100--Sobic005G168500 Sobic002G282100--Sobic007G076800 Sobic002G282100--Sobic003G390300 Sobic007G206700--Sobic010G259200 Sobic007G206700--Sobic002G001300 Sobic003G083700 Sobic003G083700 Sobic007G206700--Sobic003G083700 Sobic007G206700--Sobic010G119600 Sobic001G402701 Sobic001G402701 Sobic007G206700--Sobic001G402701 Sobic007G206700--Sobic003G390300 Sobic003G104900 Sobic003G104900 Sobic007G206700--Sobic003G104900 Sobic007G206700--Sobic010G087200 Sobic007G206700--Sobic001G062700 Sobic001G428700--Sobic010G087200 Sobic001G428700--Sobic001G494150 Sobic001G428700--Sobic002G339400 Sobic001G428700--Sobic010G014300 Sobic001G428700--Sobic002G001300 Sobic001G428700--Sobic006G166700 Sobic001G428700--Sobic002G366700 Sobic001G428700--Sobic010G259200 Sobic002G348900 Sobic002G348900 Sobic001G428700--Sobic002G348900 Sobic006G273500 Sobic006G273500 Sobic006G186200--Sobic006G273500 Sobic006G186200--Sobic004G061600 Sobic006G186200--Sobic004G107400 Sobic006G186200--Sobic003G390300 Sobic010G014900 Sobic010G014900 Sobic006G186200--Sobic010G014900 Sobic007G158400 Sobic007G158400 Sobic006G186200--Sobic007G158400 Sobic006G186200--Sobic004G156600 Sobic003G290700 Sobic003G290700 Sobic006G186200--Sobic003G290700 Sobic001G137200 Sobic001G137200 Sobic006G186200--Sobic001G137200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.