Gene annotation
Transcriptome id Sobic.002G282100.1,Sobic.002G282100.2
Synonym ATB\'ALPHA, Sb02g031510
Functional annotation serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed
UniProt A0A1W0W698 , C5X6Y2
Pfam PF01603
Panther DB PTHR10257 PTHR10257:SF28
NCBI CDD KOG2085; Serine/threonine protein phosphatase 2A, regulatory subunit
KEGG Orthology K11584; serine/threonine-protein phosphatase 2A regulatory subunit B'
Gene Ontology GO:0007165; signal transduction GO:0000159protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT5G03470 : Protein phosphatase 2A regulatory B subunit family protein
RAP-DB (Rice) LOC_Os09g37060.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a014475
Brachypodium KQJ91276
Barley HORVU5Hr1G084630.4 , HORVU5Hr1G084630.5 , HORVU5Hr1G084630.6 , HORVU5Hr1G084630.7 , HORVU5Hr1G084630.1 , HORVU5Hr1G084630.2 , HORVU5Hr1G084630.3
Wheat TraesCS5D02G341500 , TraesCS5B02G335800 , TraesCS5A02G336800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G190400 expressed protein -
2 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
3 Sobic.004G061600 expressed protein -
4 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
5 Sobic.004G156600 - -
6 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
7 Sobic.005G168500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
8 Sobic.007G076800 B3 DNA binding domain containing protein, expressed -
9 Sobic.003G390300 expressed protein -
10 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.002G038400 expressed protein -
12 Sobic.006G186200 exostosin family domain containing protein, expressed -
13 Sobic.003G407500 - -
14 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
15 Sobic.009G064600 phototropic-responsive NPH3 family protein, putative, expressed -
16 Sobic.003G415500 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
17 Sobic.004G198200 expressed protein -
18 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
19 Sobic.008G136900 expressed protein -
20 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic002G282100 Sobic002G282100 Sobic009G190400 Sobic009G190400 Sobic002G282100--Sobic009G190400 Sobic003G040100 Sobic003G040100 Sobic002G282100--Sobic003G040100 Sobic004G061600 Sobic004G061600 Sobic002G282100--Sobic004G061600 Sobic001G062700 Sobic001G062700 Sobic002G282100--Sobic001G062700 Sobic004G156600 Sobic004G156600 Sobic002G282100--Sobic004G156600 Sobic006G155900 Sobic006G155900 Sobic002G282100--Sobic006G155900 Sobic005G168500 Sobic005G168500 Sobic002G282100--Sobic005G168500 Sobic007G076800 Sobic007G076800 Sobic002G282100--Sobic007G076800 Sobic003G390300 Sobic003G390300 Sobic002G282100--Sobic003G390300 Sobic009G190400--Sobic003G040100 Sobic009G190400--Sobic006G155900 Sobic004G198200 Sobic004G198200 Sobic009G190400--Sobic004G198200 Sobic009G064600 Sobic009G064600 Sobic009G190400--Sobic009G064600 Sobic003G415500 Sobic003G415500 Sobic009G190400--Sobic003G415500 Sobic008G020500 Sobic008G020500 Sobic009G190400--Sobic008G020500 Sobic009G190400--Sobic002G282100 Sobic009G190400--Sobic004G156600 Sobic001G070200 Sobic001G070200 Sobic009G190400--Sobic001G070200 Sobic003G040100--Sobic009G190400 Sobic003G040100--Sobic008G020500 Sobic003G040100--Sobic006G155900 Sobic003G040100--Sobic004G198200 Sobic003G040100--Sobic004G156600 Sobic001G494300 Sobic001G494300 Sobic003G040100--Sobic001G494300 Sobic003G040100--Sobic003G390300 Sobic003G040100--Sobic003G415500 Sobic003G040100--Sobic004G061600 Sobic004G061600--Sobic003G390300 Sobic007G158400 Sobic007G158400 Sobic004G061600--Sobic007G158400 Sobic008G136900 Sobic008G136900 Sobic004G061600--Sobic008G136900 Sobic010G014900 Sobic010G014900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G107400 Sobic004G107400 Sobic004G061600--Sobic004G107400 Sobic004G061600--Sobic005G168500 Sobic001G137200 Sobic001G137200 Sobic004G061600--Sobic001G137200 Sobic006G273500 Sobic006G273500 Sobic004G061600--Sobic006G273500 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic010G119600 Sobic010G119600 Sobic001G062700--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic001G062700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic001G062700--Sobic007G206700 Sobic001G062700--Sobic010G014900 Sobic001G062700--Sobic004G107400 Sobic004G156600--Sobic003G390300 Sobic002G299800 Sobic002G299800 Sobic004G156600--Sobic002G299800 Sobic006G186200 Sobic006G186200 Sobic004G156600--Sobic006G186200 Sobic004G156600--Sobic004G061600 Sobic004G156600--Sobic004G107400 Sobic004G156600--Sobic008G136900 Sobic004G156600--Sobic001G062700 Sobic004G156600--Sobic003G040100 Sobic004G156600--Sobic007G076800 Sobic006G155900--Sobic009G190400 Sobic006G155900--Sobic004G198200 Sobic006G155900--Sobic003G040100 Sobic006G155900--Sobic001G494300 Sobic006G155900--Sobic008G020500 Sobic003G047200 Sobic003G047200 Sobic006G155900--Sobic003G047200 Sobic003G414400 Sobic003G414400 Sobic006G155900--Sobic003G414400 Sobic006G155900--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic006G155900--Sobic001G331100 Sobic005G168500--Sobic007G158400 Sobic005G168500--Sobic010G014900 Sobic003G006500 Sobic003G006500 Sobic005G168500--Sobic003G006500 Sobic005G168500--Sobic004G061600 Sobic005G168500--Sobic003G390300 Sobic005G168500--Sobic004G107400 Sobic005G168500--Sobic008G136900 Sobic009G028600 Sobic009G028600 Sobic005G168500--Sobic009G028600 Sobic005G168500--Sobic001G062700 Sobic007G076800--Sobic003G390300 Sobic007G076800--Sobic004G061600 Sobic007G076800--Sobic004G107400 Sobic007G076800--Sobic008G136900 Sobic009G005800 Sobic009G005800 Sobic007G076800--Sobic009G005800 Sobic007G076800--Sobic001G062700 Sobic002G010500 Sobic002G010500 Sobic007G076800--Sobic002G010500 Sobic007G076800--Sobic010G119600 Sobic007G076800--Sobic007G206700 Sobic003G390300--Sobic004G107400 Sobic003G390300--Sobic004G061600 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G104900 Sobic003G104900 Sobic003G390300--Sobic003G104900 Sobic003G390300--Sobic010G014900 Sobic003G390300--Sobic007G158400 Sobic003G390300--Sobic001G137200 Sobic003G390300--Sobic009G028600
Octagon: transcription factors


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