Gene annotation
Transcriptome id Sobic.005G168500.1
Synonym HTA11, Sb05g022880
Functional annotation Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
UniProt A0A1B6PT29
Pfam PF16211 PF00125
Panther DB PTHR23430
NCBI CDD KOG1757; Histone 2A
KEGG Orthology K11251; histone H2A
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G54560 : histone H2A 11
RAP-DB (Rice) LOC_Os03g53190.1 : Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a015830
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G158400 DUF617 domain containing protein, expressed -
2 Sobic.010G014900 expressed protein -
3 Sobic.003G006500 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.004G061600 expressed protein -
5 Sobic.003G390300 expressed protein -
6 Sobic.004G107400 expressed protein -
7 Sobic.008G136900 expressed protein -
8 Sobic.009G028600 expressed protein -
9 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
10 Sobic.001G137200 homeobox domain containing protein, expressed -
11 Sobic.002G173600 UDP-glucoronosyl/UDP-glucosyl transferase family protein, putative, expressed -
12 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
13 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I
14 Sobic.005G209800 nodulin, putative, expressed -
15 Sobic.001G527400 - -
16 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
17 Sobic.002G285525 - -
18 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
19 Sobic.010G002850 - -
20 Sobic.006G186200 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic005G168500 Sobic005G168500 Sobic007G158400 Sobic007G158400 Sobic005G168500--Sobic007G158400 Sobic010G014900 Sobic010G014900 Sobic005G168500--Sobic010G014900 Sobic003G006500 Sobic003G006500 Sobic005G168500--Sobic003G006500 Sobic004G061600 Sobic004G061600 Sobic005G168500--Sobic004G061600 Sobic003G390300 Sobic003G390300 Sobic005G168500--Sobic003G390300 Sobic004G107400 Sobic004G107400 Sobic005G168500--Sobic004G107400 Sobic008G136900 Sobic008G136900 Sobic005G168500--Sobic008G136900 Sobic009G028600 Sobic009G028600 Sobic005G168500--Sobic009G028600 Sobic001G062700 Sobic001G062700 Sobic005G168500--Sobic001G062700 Sobic007G158400--Sobic010G014900 Sobic007G158400--Sobic004G107400 Sobic001G137200 Sobic001G137200 Sobic007G158400--Sobic001G137200 Sobic006G171000 Sobic006G171000 Sobic007G158400--Sobic006G171000 Sobic007G158400--Sobic004G061600 Sobic007G158400--Sobic009G028600 Sobic007G158400--Sobic005G168500 Sobic005G231800 Sobic005G231800 Sobic007G158400--Sobic005G231800 Sobic007G158400--Sobic003G006500 Sobic010G014900--Sobic007G158400 Sobic010G014900--Sobic004G107400 Sobic010G014900--Sobic001G137200 Sobic010G014900--Sobic006G171000 Sobic010G014900--Sobic009G028600 Sobic010G014900--Sobic005G231800 Sobic002G285525 Sobic002G285525 Sobic010G014900--Sobic002G285525 Sobic004G226300 Sobic004G226300 Sobic010G014900--Sobic004G226300 Sobic001G527400 Sobic001G527400 Sobic010G014900--Sobic001G527400 Sobic003G006500--Sobic007G158400 Sobic003G006500--Sobic010G014900 Sobic003G006500--Sobic005G168500 Sobic003G006500--Sobic004G061600 Sobic003G006500--Sobic008G136900 Sobic007G153300 Sobic007G153300 Sobic003G006500--Sobic007G153300 Sobic003G006500--Sobic004G107400 Sobic003G359200 Sobic003G359200 Sobic003G006500--Sobic003G359200 Sobic003G006500--Sobic003G390300 Sobic004G061600--Sobic003G390300 Sobic004G061600--Sobic007G158400 Sobic004G061600--Sobic008G136900 Sobic004G061600--Sobic010G014900 Sobic004G061600--Sobic001G062700 Sobic004G061600--Sobic004G107400 Sobic004G061600--Sobic005G168500 Sobic004G061600--Sobic001G137200 Sobic006G273500 Sobic006G273500 Sobic004G061600--Sobic006G273500 Sobic003G390300--Sobic004G107400 Sobic003G390300--Sobic004G061600 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G104900 Sobic003G104900 Sobic003G390300--Sobic003G104900 Sobic003G390300--Sobic010G014900 Sobic003G390300--Sobic007G158400 Sobic003G390300--Sobic001G137200 Sobic003G390300--Sobic009G028600 Sobic004G107400--Sobic006G171000 Sobic004G107400--Sobic010G014900 Sobic004G107400--Sobic001G137200 Sobic004G107400--Sobic003G390300 Sobic005G209800 Sobic005G209800 Sobic004G107400--Sobic005G209800 Sobic002G078850 Sobic002G078850 Sobic004G107400--Sobic002G078850 Sobic004G107400--Sobic003G104900 Sobic004G107400--Sobic005G231800 Sobic008G002100 Sobic008G002100 Sobic004G107400--Sobic008G002100 Sobic008G136900--Sobic003G390300 Sobic008G136900--Sobic004G061600 Sobic008G136900--Sobic004G107400 Sobic001G103400 Sobic001G103400 Sobic008G136900--Sobic001G103400 Sobic008G136900--Sobic007G158400 Sobic001G483700 Sobic001G483700 Sobic008G136900--Sobic001G483700 Sobic008G136900--Sobic010G014900 Sobic008G136900--Sobic003G104900 Sobic008G136900--Sobic009G028600 Sobic009G028600--Sobic006G171000 Sobic009G028600--Sobic004G226300 Sobic007G183000 Sobic007G183000 Sobic009G028600--Sobic007G183000 Sobic009G028600--Sobic002G285525 Sobic009G028600--Sobic001G527400 Sobic009G028600--Sobic005G231800 Sobic009G028600--Sobic001G137200 Sobic008G023000 Sobic008G023000 Sobic009G028600--Sobic008G023000 Sobic002G048250 Sobic002G048250 Sobic009G028600--Sobic002G048250 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic010G119600 Sobic010G119600 Sobic001G062700--Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic001G062700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic001G062700--Sobic007G206700 Sobic001G062700--Sobic010G014900 Sobic001G062700--Sobic004G107400
Octagon: transcription factors


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