Gene annotation
Transcriptome id Sobic.010G119600.1
Synonym Sb10g010550
Functional annotation embryogenesis transmembrane protein, putative, expressed
UniProt A0A194YIN1
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11000 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os06g17570.1 : embryogenesis transmembrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a050500
Brachypodium PNT76062
Barley -
Wheat TraesCS7D02G216100 , TraesCS7A02G214000 , TraesCS7B02G121300 , TraesCS7B02G121300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.001G483700 Cupin domain containing protein, expressed -
3 Sobic.003G390300 expressed protein -
4 Sobic.001G137200 homeobox domain containing protein, expressed -
5 Sobic.010G002850 - -
6 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
7 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
8 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
9 Sobic.003G083700 DNA binding protein, putative, expressed -
10 Sobic.005G209800 nodulin, putative, expressed -
11 Sobic.001G402701 - -
12 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
13 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
14 Sobic.004G061600 expressed protein -
15 Sobic.004G107400 expressed protein -
16 Sobic.008G136900 expressed protein -
17 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
18 Sobic.009G028600 expressed protein -
19 Sobic.010G014900 expressed protein -
20 Sobic.010G014300 expressed protein -


Gene co-expression network
sample Sobic010G119600 Sobic010G119600 Sobic010G259200 Sobic010G259200 Sobic010G119600--Sobic010G259200 Sobic001G483700 Sobic001G483700 Sobic010G119600--Sobic001G483700 Sobic003G390300 Sobic003G390300 Sobic010G119600--Sobic003G390300 Sobic001G137200 Sobic001G137200 Sobic010G119600--Sobic001G137200 Sobic010G002850 Sobic010G002850 Sobic010G119600--Sobic010G002850 Sobic007G206700 Sobic007G206700 Sobic010G119600--Sobic007G206700 Sobic003G104900 Sobic003G104900 Sobic010G119600--Sobic003G104900 Sobic001G062700 Sobic001G062700 Sobic010G119600--Sobic001G062700 Sobic003G083700 Sobic003G083700 Sobic010G119600--Sobic003G083700 Sobic010G259200--Sobic007G206700 Sobic002G001300 Sobic002G001300 Sobic010G259200--Sobic002G001300 Sobic010G259200--Sobic010G119600 Sobic010G259200--Sobic003G083700 Sobic001G402701 Sobic001G402701 Sobic010G259200--Sobic001G402701 Sobic010G259200--Sobic003G104900 Sobic010G259200--Sobic003G390300 Sobic010G259200--Sobic010G002850 Sobic010G014300 Sobic010G014300 Sobic010G259200--Sobic010G014300 Sobic004G226300 Sobic004G226300 Sobic001G483700--Sobic004G226300 Sobic007G183000 Sobic007G183000 Sobic001G483700--Sobic007G183000 Sobic005G209800 Sobic005G209800 Sobic001G483700--Sobic005G209800 Sobic001G483700--Sobic001G137200 Sobic002G285525 Sobic002G285525 Sobic001G483700--Sobic002G285525 Sobic001G527400 Sobic001G527400 Sobic001G483700--Sobic001G527400 Sobic008G002100 Sobic008G002100 Sobic001G483700--Sobic008G002100 Sobic001G483700--Sobic003G104900 Sobic008G023000 Sobic008G023000 Sobic001G483700--Sobic008G023000 Sobic004G107400 Sobic004G107400 Sobic003G390300--Sobic004G107400 Sobic004G061600 Sobic004G061600 Sobic003G390300--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic003G390300--Sobic008G136900 Sobic003G390300--Sobic001G062700 Sobic003G390300--Sobic003G104900 Sobic010G014900 Sobic010G014900 Sobic003G390300--Sobic010G014900 Sobic007G158400 Sobic007G158400 Sobic003G390300--Sobic007G158400 Sobic003G390300--Sobic001G137200 Sobic009G028600 Sobic009G028600 Sobic003G390300--Sobic009G028600 Sobic001G137200--Sobic002G285525 Sobic010G152700 Sobic010G152700 Sobic001G137200--Sobic010G152700 Sobic006G171000 Sobic006G171000 Sobic001G137200--Sobic006G171000 Sobic001G137200--Sobic005G209800 Sobic001G137200--Sobic004G226300 Sobic001G137200--Sobic008G002100 Sobic001G137200--Sobic007G183000 Sobic001G137200--Sobic001G483700 Sobic001G137200--Sobic001G527400 Sobic010G002850--Sobic005G209800 Sobic010G002850--Sobic008G023000 Sobic010G002850--Sobic008G002100 Sobic010G002850--Sobic004G226300 Sobic010G002850--Sobic001G527400 Sobic010G002850--Sobic007G183000 Sobic010G002850--Sobic006G171000 Sobic005G156700 Sobic005G156700 Sobic010G002850--Sobic005G156700 Sobic005G231800 Sobic005G231800 Sobic010G002850--Sobic005G231800 Sobic007G206700--Sobic010G259200 Sobic007G206700--Sobic002G001300 Sobic007G206700--Sobic003G083700 Sobic007G206700--Sobic010G119600 Sobic007G206700--Sobic001G402701 Sobic007G206700--Sobic003G390300 Sobic007G206700--Sobic003G104900 Sobic010G087200 Sobic010G087200 Sobic007G206700--Sobic010G087200 Sobic007G206700--Sobic001G062700 Sobic003G104900--Sobic005G209800 Sobic003G104900--Sobic001G483700 Sobic003G104900--Sobic008G002100 Sobic003G104900--Sobic008G023000 Sobic003G104900--Sobic001G527400 Sobic003G104900--Sobic007G183000 Sobic003G104900--Sobic005G231800 Sobic003G104900--Sobic004G226300 Sobic003G104900--Sobic006G171000 Sobic001G062700--Sobic003G390300 Sobic001G062700--Sobic004G061600 Sobic001G062700--Sobic008G136900 Sobic007G092300 Sobic007G092300 Sobic001G062700--Sobic007G092300 Sobic001G062700--Sobic010G119600 Sobic001G062700--Sobic010G259200 Sobic001G062700--Sobic007G206700 Sobic001G062700--Sobic010G014900 Sobic001G062700--Sobic004G107400 Sobic003G083700--Sobic003G104900 Sobic003G083700--Sobic010G259200 Sobic003G083700--Sobic007G206700 Sobic003G083700--Sobic002G001300 Sobic003G083700--Sobic001G483700 Sobic003G083700--Sobic010G002850 Sobic003G083700--Sobic005G209800 Sobic003G083700--Sobic003G390300 Sobic003G083700--Sobic001G402701
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.