Gene annotation
Transcriptome id Sobic.002G058600.1
Synonym Sb02g004920
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
OsFBX237 - F-box domain containing protein, expressed
UniProt A0A1W0W2H0
Pfam -
Panther DB PTHR32133 PTHR32133:SF82
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g35060.1 : OsFBX238 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045258
Brachypodium PNT70661 , KQK04704
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G366700 expressed protein -
2 Sobic.007G038900 expressed protein -
3 Sobic.001G513100 LYR motif containing protein, putative, expressed -
4 Sobic.002G287500 RNA recognition motif containing protein, expressed K13154: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
5 Sobic.001G494150 - -
6 Sobic.006G278600 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed K10767: mRNA N6-methyladenine demethylase
7 Sobic.010G087200 expressed protein -
8 Sobic.009G236500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G008300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
10 Sobic.009G005800 formin-like protein 6 precursor, putative, expressed -
11 Sobic.002G038400 expressed protein -
12 Sobic.004G063750 - -
13 Sobic.006G144800 expressed protein -
14 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
15 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
16 Sobic.006G123000 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.001G523500 DUF623 domain containing protein, expressed -
18 Sobic.007G076800 B3 DNA binding domain containing protein, expressed -
19 Sobic.002G173600 UDP-glucoronosyl/UDP-glucosyl transferase family protein, putative, expressed -
20 Sobic.007G157550 - -


Gene co-expression network
sample Sobic002G058600 Sobic002G058600 Sobic002G366700 Sobic002G366700 Sobic002G058600--Sobic002G366700 Sobic007G038900 Sobic007G038900 Sobic002G058600--Sobic007G038900 Sobic001G513100 Sobic001G513100 Sobic002G058600--Sobic001G513100 Sobic002G287500 Sobic002G287500 Sobic002G058600--Sobic002G287500 Sobic001G494150 Sobic001G494150 Sobic002G058600--Sobic001G494150 Sobic006G278600 Sobic006G278600 Sobic002G058600--Sobic006G278600 Sobic010G087200 Sobic010G087200 Sobic002G058600--Sobic010G087200 Sobic009G236500 Sobic009G236500 Sobic002G058600--Sobic009G236500 Sobic003G008300 Sobic003G008300 Sobic002G058600--Sobic003G008300 Sobic002G366700--Sobic001G494150 Sobic002G339400 Sobic002G339400 Sobic002G366700--Sobic002G339400 Sobic002G366700--Sobic010G087200 Sobic006G075700 Sobic006G075700 Sobic002G366700--Sobic006G075700 Sobic002G366700--Sobic002G058600 Sobic002G366700--Sobic001G513100 Sobic010G259200 Sobic010G259200 Sobic002G366700--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic002G366700--Sobic010G119600 Sobic001G428700 Sobic001G428700 Sobic002G366700--Sobic001G428700 Sobic007G038900--Sobic002G287500 Sobic007G038900--Sobic002G058600 Sobic007G038900--Sobic006G278600 Sobic004G063750 Sobic004G063750 Sobic007G038900--Sobic004G063750 Sobic004G295400 Sobic004G295400 Sobic007G038900--Sobic004G295400 Sobic004G089700 Sobic004G089700 Sobic007G038900--Sobic004G089700 Sobic002G173600 Sobic002G173600 Sobic007G038900--Sobic002G173600 Sobic004G206900 Sobic004G206900 Sobic007G038900--Sobic004G206900 Sobic009G187500 Sobic009G187500 Sobic007G038900--Sobic009G187500 Sobic001G513100--Sobic002G366700 Sobic001G513100--Sobic003G008300 Sobic001G513100--Sobic002G058600 Sobic001G513100--Sobic002G339400 Sobic001G513100--Sobic001G494150 Sobic001G513100--Sobic010G087200 Sobic001G513100--Sobic001G428700 Sobic003G118900 Sobic003G118900 Sobic001G513100--Sobic003G118900 Sobic004G180600 Sobic004G180600 Sobic001G513100--Sobic004G180600 Sobic002G287500--Sobic007G038900 Sobic002G287500--Sobic004G063750 Sobic009G088401 Sobic009G088401 Sobic002G287500--Sobic009G088401 Sobic006G273500 Sobic006G273500 Sobic002G287500--Sobic006G273500 Sobic007G072400 Sobic007G072400 Sobic002G287500--Sobic007G072400 Sobic002G287500--Sobic002G173600 Sobic008G119200 Sobic008G119200 Sobic002G287500--Sobic008G119200 Sobic002G287500--Sobic002G058600 Sobic002G287500--Sobic009G187500 Sobic001G494150--Sobic006G075700 Sobic001G494150--Sobic010G259200 Sobic001G494150--Sobic010G119600 Sobic001G494150--Sobic009G236500 Sobic002G001300 Sobic002G001300 Sobic001G494150--Sobic002G001300 Sobic001G494150--Sobic002G366700 Sobic010G002850 Sobic010G002850 Sobic001G494150--Sobic010G002850 Sobic001G494150--Sobic010G087200 Sobic005G156700 Sobic005G156700 Sobic001G494150--Sobic005G156700 Sobic007G206550 Sobic007G206550 Sobic006G278600--Sobic007G206550 Sobic002G003100 Sobic002G003100 Sobic006G278600--Sobic002G003100 Sobic006G278600--Sobic004G089700 Sobic007G157550 Sobic007G157550 Sobic006G278600--Sobic007G157550 Sobic004G347866 Sobic004G347866 Sobic006G278600--Sobic004G347866 Sobic005G209800 Sobic005G209800 Sobic006G278600--Sobic005G209800 Sobic002G048250 Sobic002G048250 Sobic006G278600--Sobic002G048250 Sobic001G457100 Sobic001G457100 Sobic006G278600--Sobic001G457100 Sobic005G231800 Sobic005G231800 Sobic006G278600--Sobic005G231800 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic010G087200--Sobic007G206700 Sobic010G087200--Sobic001G428700 Sobic010G014300 Sobic010G014300 Sobic010G087200--Sobic010G014300 Sobic010G087200--Sobic001G494150 Sobic006G166700 Sobic006G166700 Sobic010G087200--Sobic006G166700 Sobic010G087200--Sobic010G119600 Sobic010G087200--Sobic002G366700 Sobic003G337700 Sobic003G337700 Sobic009G236500--Sobic003G337700 Sobic004G224300 Sobic004G224300 Sobic009G236500--Sobic004G224300 Sobic009G236500--Sobic004G089700 Sobic002G339250 Sobic002G339250 Sobic009G236500--Sobic002G339250 Sobic009G236500--Sobic005G209800 Sobic009G236500--Sobic001G457100 Sobic009G236500--Sobic010G002850 Sobic009G236500--Sobic002G048250 Sobic004G226300 Sobic004G226300 Sobic009G236500--Sobic004G226300 Sobic003G008300--Sobic001G513100 Sobic003G008300--Sobic002G058600 Sobic003G008300--Sobic002G366700 Sobic003G008300--Sobic003G118900 Sobic002G349300 Sobic002G349300 Sobic003G008300--Sobic002G349300 Sobic002G046700 Sobic002G046700 Sobic003G008300--Sobic002G046700 Sobic003G008300--Sobic002G339400 Sobic010G099600 Sobic010G099600 Sobic003G008300--Sobic010G099600 Sobic003G008300--Sobic007G038900
Octagon: transcription factors


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