Gene annotation
Transcriptome id Sobic.003G008300.1
Synonym Sb03g000890
Functional annotation thioesterase family protein, putative, expressed
UniProt C5XJP0
Pfam PF03061
Panther DB PTHR21660
NCBI CDD KOG3328; HGG motif-containing thioesterase
KEGG Orthology K17362; acyl-coenzyme A thioesterase 13
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G16175 : Thioesterase superfamily protein
RAP-DB (Rice) LOC_Os01g12910.1 : thioesterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a035992
Brachypodium KQK03417
Barley -
Wheat TraesCS3D02G162100 , TraesCS3B02G181000 , TraesCS3A02G154700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G513100 LYR motif containing protein, putative, expressed -
2 Sobic.002G058600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsFBX237 - F-box domain containing protein, expressed -
3 Sobic.002G366700 expressed protein -
4 Sobic.003G118900 disease resistance protein RGA2, putative, expressed -
5 Sobic.002G349300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
6 Sobic.002G046700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@versicolorin reductase, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
7 Sobic.002G339400 expressed protein -
8 Sobic.010G099600 expressed protein -
9 Sobic.007G038900 expressed protein -
10 Sobic.010G087200 expressed protein -
11 Sobic.005G076600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G044100 60S ribosomal protein L18a-1, putative, expressed -
13 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.001G494150 - -
15 Sobic.002G287500 RNA recognition motif containing protein, expressed K13154: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
16 Sobic.007G125100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.006G157200 expressed protein -
18 Sobic.007G131800 Annexin D5(PubMedID : 26320239)@annexin, putative, expressed K17095: annexin A7/11
19 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase


Gene co-expression network
sample Sobic003G008300 Sobic003G008300 Sobic001G513100 Sobic001G513100 Sobic003G008300--Sobic001G513100 Sobic002G058600 Sobic002G058600 Sobic003G008300--Sobic002G058600 Sobic002G366700 Sobic002G366700 Sobic003G008300--Sobic002G366700 Sobic003G118900 Sobic003G118900 Sobic003G008300--Sobic003G118900 Sobic002G349300 Sobic002G349300 Sobic003G008300--Sobic002G349300 Sobic002G046700 Sobic002G046700 Sobic003G008300--Sobic002G046700 Sobic002G339400 Sobic002G339400 Sobic003G008300--Sobic002G339400 Sobic010G099600 Sobic010G099600 Sobic003G008300--Sobic010G099600 Sobic007G038900 Sobic007G038900 Sobic003G008300--Sobic007G038900 Sobic001G513100--Sobic002G366700 Sobic001G513100--Sobic003G008300 Sobic001G513100--Sobic002G058600 Sobic001G513100--Sobic002G339400 Sobic001G494150 Sobic001G494150 Sobic001G513100--Sobic001G494150 Sobic010G087200 Sobic010G087200 Sobic001G513100--Sobic010G087200 Sobic001G428700 Sobic001G428700 Sobic001G513100--Sobic001G428700 Sobic001G513100--Sobic003G118900 Sobic004G180600 Sobic004G180600 Sobic001G513100--Sobic004G180600 Sobic002G058600--Sobic002G366700 Sobic002G058600--Sobic007G038900 Sobic002G058600--Sobic001G513100 Sobic002G287500 Sobic002G287500 Sobic002G058600--Sobic002G287500 Sobic002G058600--Sobic001G494150 Sobic006G278600 Sobic006G278600 Sobic002G058600--Sobic006G278600 Sobic002G058600--Sobic010G087200 Sobic009G236500 Sobic009G236500 Sobic002G058600--Sobic009G236500 Sobic002G058600--Sobic003G008300 Sobic002G366700--Sobic001G494150 Sobic002G366700--Sobic002G339400 Sobic002G366700--Sobic010G087200 Sobic006G075700 Sobic006G075700 Sobic002G366700--Sobic006G075700 Sobic002G366700--Sobic002G058600 Sobic002G366700--Sobic001G513100 Sobic010G259200 Sobic010G259200 Sobic002G366700--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic002G366700--Sobic010G119600 Sobic002G366700--Sobic001G428700 Sobic003G118900--Sobic003G008300 Sobic007G131800 Sobic007G131800 Sobic003G118900--Sobic007G131800 Sobic003G118900--Sobic001G513100 Sobic006G166700 Sobic006G166700 Sobic003G118900--Sobic006G166700 Sobic003G118900--Sobic010G087200 Sobic001G020500 Sobic001G020500 Sobic003G118900--Sobic001G020500 Sobic002G001300 Sobic002G001300 Sobic003G118900--Sobic002G001300 Sobic003G118900--Sobic002G366700 Sobic003G118900--Sobic002G339400 Sobic002G349300--Sobic003G008300 Sobic002G349300--Sobic001G513100 Sobic004G288400 Sobic004G288400 Sobic002G349300--Sobic004G288400 Sobic003G395500 Sobic003G395500 Sobic002G349300--Sobic003G395500 Sobic002G349300--Sobic006G166700 Sobic006G176100 Sobic006G176100 Sobic002G349300--Sobic006G176100 Sobic005G198300 Sobic005G198300 Sobic002G349300--Sobic005G198300 Sobic002G349300--Sobic002G046700 Sobic002G199100 Sobic002G199100 Sobic002G349300--Sobic002G199100 Sobic002G046700--Sobic006G176100 Sobic010G171400 Sobic010G171400 Sobic002G046700--Sobic010G171400 Sobic002G334500 Sobic002G334500 Sobic002G046700--Sobic002G334500 Sobic004G307700 Sobic004G307700 Sobic002G046700--Sobic004G307700 Sobic003G260800 Sobic003G260800 Sobic002G046700--Sobic003G260800 Sobic007G022200 Sobic007G022200 Sobic002G046700--Sobic007G022200 Sobic002G046700--Sobic002G199100 Sobic009G153200 Sobic009G153200 Sobic002G046700--Sobic009G153200 Sobic002G046700--Sobic003G008300 Sobic002G339400--Sobic002G366700 Sobic002G339400--Sobic001G494150 Sobic002G339400--Sobic010G087200 Sobic002G339400--Sobic001G428700 Sobic002G339400--Sobic004G288400 Sobic010G014300 Sobic010G014300 Sobic002G339400--Sobic010G014300 Sobic002G339400--Sobic006G075700 Sobic002G339400--Sobic006G166700 Sobic002G339400--Sobic010G259200 Sobic005G075900 Sobic005G075900 Sobic010G099600--Sobic005G075900 Sobic010G099600--Sobic002G339400 Sobic002G311400 Sobic002G311400 Sobic010G099600--Sobic002G311400 Sobic010G099600--Sobic001G428700 Sobic010G099600--Sobic004G288400 Sobic004G202000 Sobic004G202000 Sobic010G099600--Sobic004G202000 Sobic006G157200 Sobic006G157200 Sobic010G099600--Sobic006G157200 Sobic010G099600--Sobic006G166700 Sobic002G348900 Sobic002G348900 Sobic010G099600--Sobic002G348900 Sobic007G038900--Sobic002G287500 Sobic007G038900--Sobic002G058600 Sobic007G038900--Sobic006G278600 Sobic004G063750 Sobic004G063750 Sobic007G038900--Sobic004G063750 Sobic004G295400 Sobic004G295400 Sobic007G038900--Sobic004G295400 Sobic004G089700 Sobic004G089700 Sobic007G038900--Sobic004G089700 Sobic002G173600 Sobic002G173600 Sobic007G038900--Sobic002G173600 Sobic004G206900 Sobic004G206900 Sobic007G038900--Sobic004G206900 Sobic009G187500 Sobic009G187500 Sobic007G038900--Sobic009G187500
Octagon: transcription factors


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