Gene annotation
Transcriptome id Sobic.003G044100.1,Sobic.003G044100.2
Synonym Sb03g003870
Functional annotation 60S ribosomal protein L18a-1, putative, expressed
UniProt A0A1B6Q197 , A0A1B6Q1A6
Pfam -
Panther DB PTHR10052 PTHR10052:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17080 : Ribosomal protein L18ae family
RAP-DB (Rice) LOC_Os01g14070.1 : 60S ribosomal protein L18a-1, putative, expressed
MaizeGDB (Corn) Zm00025a023191
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G044100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G267000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
2 Sobic.002G273100 expressed protein K19033: PSRP4, 30S ribosomal protein S31
3 Sobic.001G526900 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
4 Sobic.004G179700 expressed protein -
5 Sobic.001G530350 - -
6 Sobic.007G079700 pentatricopeptide, putative, expressed -
7 Sobic.004G179600 VP15, putative, expressed K03635: MOCS2B, molybdopterin synthase catalytic subunit
8 Sobic.001G189900 expressed protein -
9 Sobic.005G055000 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
10 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
11 Sobic.003G008300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
12 Sobic.001G206000 acyltransferase, putative, expressed K00655: 1-acyl-sn-glycerol-3-phosphate acyltransferase
13 Sobic.004G095600 NBS-LRR type disease resistance protein, putative, expressed -
14 Sobic.002G034500 ERD4 protein, putative, expressed -
15 Sobic.001G285000 - -
16 Sobic.002G335400 OsFBX250 - F-box domain containing protein, expressed -
17 Sobic.010G045833 - -
18 Sobic.001G513100 LYR motif containing protein, putative, expressed -
19 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
20 Sobic.004G140000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -


Gene co-expression network
sample Sobic003G044100 Sobic003G044100 Sobic010G267000 Sobic010G267000 Sobic003G044100--Sobic010G267000 Sobic002G273100 Sobic002G273100 Sobic003G044100--Sobic002G273100 Sobic001G526900 Sobic001G526900 Sobic003G044100--Sobic001G526900 Sobic004G179700 Sobic004G179700 Sobic003G044100--Sobic004G179700 Sobic001G530350 Sobic001G530350 Sobic003G044100--Sobic001G530350 Sobic007G079700 Sobic007G079700 Sobic003G044100--Sobic007G079700 Sobic004G179600 Sobic004G179600 Sobic003G044100--Sobic004G179600 Sobic001G189900 Sobic001G189900 Sobic003G044100--Sobic001G189900 Sobic005G055000 Sobic005G055000 Sobic003G044100--Sobic005G055000 Sobic003G013600 Sobic003G013600 Sobic010G267000--Sobic003G013600 Sobic003G123300 Sobic003G123300 Sobic010G267000--Sobic003G123300 Sobic001G293800 Sobic001G293800 Sobic010G267000--Sobic001G293800 Sobic004G096300 Sobic004G096300 Sobic010G267000--Sobic004G096300 Sobic003G085700 Sobic003G085700 Sobic010G267000--Sobic003G085700 Sobic010G276000 Sobic010G276000 Sobic010G267000--Sobic010G276000 Sobic001G465100 Sobic001G465100 Sobic010G267000--Sobic001G465100 Sobic001G182600 Sobic001G182600 Sobic010G267000--Sobic001G182600 Sobic010G246600 Sobic010G246600 Sobic010G267000--Sobic010G246600 Sobic002G273100--Sobic001G526900 Sobic004G352900 Sobic004G352900 Sobic002G273100--Sobic004G352900 Sobic007G200100 Sobic007G200100 Sobic002G273100--Sobic007G200100 Sobic002G427900 Sobic002G427900 Sobic002G273100--Sobic002G427900 Sobic004G014000 Sobic004G014000 Sobic002G273100--Sobic004G014000 Sobic006G246100 Sobic006G246100 Sobic002G273100--Sobic006G246100 Sobic004G035200 Sobic004G035200 Sobic002G273100--Sobic004G035200 Sobic001G061101 Sobic001G061101 Sobic002G273100--Sobic001G061101 Sobic002G273100--Sobic001G530350 Sobic001G526900--Sobic001G530350 Sobic001G526900--Sobic002G427900 Sobic001G526900--Sobic004G352900 Sobic010G066300 Sobic010G066300 Sobic001G526900--Sobic010G066300 Sobic001G321500 Sobic001G321500 Sobic001G526900--Sobic001G321500 Sobic006G097800 Sobic006G097800 Sobic001G526900--Sobic006G097800 Sobic009G100800 Sobic009G100800 Sobic001G526900--Sobic009G100800 Sobic003G296300 Sobic003G296300 Sobic001G526900--Sobic003G296300 Sobic007G188701 Sobic007G188701 Sobic001G526900--Sobic007G188701 Sobic009G131100 Sobic009G131100 Sobic004G179700--Sobic009G131100 Sobic004G179700--Sobic007G079700 Sobic001G206000 Sobic001G206000 Sobic004G179700--Sobic001G206000 Sobic001G285000 Sobic001G285000 Sobic004G179700--Sobic001G285000 Sobic006G262900 Sobic006G262900 Sobic004G179700--Sobic006G262900 Sobic001G225600 Sobic001G225600 Sobic004G179700--Sobic001G225600 Sobic009G199700 Sobic009G199700 Sobic004G179700--Sobic009G199700 Sobic002G335400 Sobic002G335400 Sobic004G179700--Sobic002G335400 Sobic003G277000 Sobic003G277000 Sobic004G179700--Sobic003G277000 Sobic001G530350--Sobic006G097800 Sobic001G530350--Sobic001G526900 Sobic001G530350--Sobic003G296300 Sobic001G093900 Sobic001G093900 Sobic001G530350--Sobic001G093900 Sobic001G345400 Sobic001G345400 Sobic001G530350--Sobic001G345400 Sobic001G530350--Sobic009G100800 Sobic001G530350--Sobic001G225600 Sobic001G530350--Sobic003G013600 Sobic001G530350--Sobic006G246100 Sobic009G114800 Sobic009G114800 Sobic007G079700--Sobic009G114800 Sobic006G054500 Sobic006G054500 Sobic007G079700--Sobic006G054500 Sobic007G079700--Sobic006G262900 Sobic002G273900 Sobic002G273900 Sobic007G079700--Sobic002G273900 Sobic007G079700--Sobic009G199700 Sobic003G116700 Sobic003G116700 Sobic007G079700--Sobic003G116700 Sobic004G301900 Sobic004G301900 Sobic007G079700--Sobic004G301900 Sobic004G253000 Sobic004G253000 Sobic007G079700--Sobic004G253000 Sobic004G272300 Sobic004G272300 Sobic007G079700--Sobic004G272300 Sobic007G025500 Sobic007G025500 Sobic004G179600--Sobic007G025500 Sobic007G107000 Sobic007G107000 Sobic004G179600--Sobic007G107000 Sobic002G212200 Sobic002G212200 Sobic004G179600--Sobic002G212200 Sobic002G319100 Sobic002G319100 Sobic004G179600--Sobic002G319100 Sobic009G023200 Sobic009G023200 Sobic004G179600--Sobic009G023200 Sobic003G362100 Sobic003G362100 Sobic004G179600--Sobic003G362100 Sobic005G228000 Sobic005G228000 Sobic004G179600--Sobic005G228000 Sobic001G019900 Sobic001G019900 Sobic004G179600--Sobic001G019900 Sobic001G252300 Sobic001G252300 Sobic004G179600--Sobic001G252300 Sobic001G189900--Sobic003G044100 Sobic005G168700 Sobic005G168700 Sobic001G189900--Sobic005G168700 Sobic001G189900--Sobic004G179600 Sobic001G532300 Sobic001G532300 Sobic001G189900--Sobic001G532300 Sobic008G043700 Sobic008G043700 Sobic001G189900--Sobic008G043700 Sobic010G162400 Sobic010G162400 Sobic001G189900--Sobic010G162400 Sobic001G170700 Sobic001G170700 Sobic001G189900--Sobic001G170700 Sobic010G074600 Sobic010G074600 Sobic001G189900--Sobic010G074600 Sobic002G369800 Sobic002G369800 Sobic001G189900--Sobic002G369800 Sobic008G051900 Sobic008G051900 Sobic005G055000--Sobic008G051900 Sobic006G237200 Sobic006G237200 Sobic005G055000--Sobic006G237200 Sobic004G028000 Sobic004G028000 Sobic005G055000--Sobic004G028000 Sobic003G216500 Sobic003G216500 Sobic005G055000--Sobic003G216500 Sobic002G410700 Sobic002G410700 Sobic005G055000--Sobic002G410700 Sobic003G325500 Sobic003G325500 Sobic005G055000--Sobic003G325500 Sobic009G207100 Sobic009G207100 Sobic005G055000--Sobic009G207100 Sobic009G168000 Sobic009G168000 Sobic005G055000--Sobic009G168000 Sobic001G526100 Sobic001G526100 Sobic005G055000--Sobic001G526100
Octagon: transcription factors


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