Gene annotation
Transcriptome id Sobic.002G034500.1
Synonym Sb02g003010, ERD4
Functional annotation ERD4 protein, putative, expressed
UniProt C5X9J3
Pfam PF14703 PF13967 PF02714
Panther DB PTHR13018 PTHR13018:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G30360 : Early-responsive to dehydration stress protein (ERD4)
RAP-DB (Rice) LOC_Os07g05570.1 : ERD4 protein, putative, expressed
MaizeGDB (Corn) Zm00025a016164 , Zm00025a018330
Brachypodium KQK21049
Barley HORVU1Hr1G057630.1 , HORVU1Hr1G057630.2 , HORVU1Hr1G057630.3 , HORVU1Hr1G057630.4 , HORVU1Hr1G057630.5 , HORVU2Hr1G060390.2 , HORVU2Hr1G060390.3 , HORVU2Hr1G060390.1 , HORVU2Hr1G060390.6 , HORVU2Hr1G060390.7 , HORVU2Hr1G060390.4 , HORVU2Hr1G060390.5
Wheat TraesCS3A02G019900 , TraesCS2D02G252800 , TraesCS2D02G252800 , TraesCS2D02G252800 , TraesCS2B02G271900 , TraesCS2B02G271900 , TraesCS2B02G271900 , TraesCS3D02G026700 , TraesCS2A02G252100 , TraesCS2A02G252100
Populus -


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cDNA sequences
Sobic.002G034500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
2 Sobic.002G373001 - -
3 Sobic.002G082600 DUF567 domain containing protein, putative, expressed -
4 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
5 Sobic.001G234300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, RING-type, putative, expressed -
6 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
7 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
8 Sobic.002G092801 - -
9 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
10 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
11 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
12 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
13 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
14 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
15 Sobic.003G162700 expressed protein -
16 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
17 Sobic.004G095600 NBS-LRR type disease resistance protein, putative, expressed -
18 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
19 Sobic.006G131600 OsCML22 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
20 Sobic.001G536500 expressed protein -


Gene co-expression network
sample Sobic002G034500 Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G034500--Sobic003G021500 Sobic002G373001 Sobic002G373001 Sobic002G034500--Sobic002G373001 Sobic002G082600 Sobic002G082600 Sobic002G034500--Sobic002G082600 Sobic005G228000 Sobic005G228000 Sobic002G034500--Sobic005G228000 Sobic001G234300 Sobic001G234300 Sobic002G034500--Sobic001G234300 Sobic001G019900 Sobic001G019900 Sobic002G034500--Sobic001G019900 Sobic001G449700 Sobic001G449700 Sobic002G034500--Sobic001G449700 Sobic002G092801 Sobic002G092801 Sobic002G034500--Sobic002G092801 Sobic002G312400 Sobic002G312400 Sobic002G034500--Sobic002G312400 Sobic003G364600 Sobic003G364600 Sobic003G021500--Sobic003G364600 Sobic003G202200 Sobic003G202200 Sobic003G021500--Sobic003G202200 Sobic003G021500--Sobic001G449700 Sobic009G036000 Sobic009G036000 Sobic003G021500--Sobic009G036000 Sobic003G320800 Sobic003G320800 Sobic003G021500--Sobic003G320800 Sobic001G383700 Sobic001G383700 Sobic003G021500--Sobic001G383700 Sobic003G021500--Sobic002G034500 Sobic003G021500--Sobic002G082600 Sobic003G021500--Sobic002G312400 Sobic002G373001--Sobic001G449700 Sobic002G373001--Sobic002G034500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic003G102200 Sobic003G102200 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600 Sobic002G082600--Sobic009G036000 Sobic009G036100 Sobic009G036100 Sobic002G082600--Sobic009G036100 Sobic009G159400 Sobic009G159400 Sobic002G082600--Sobic009G159400 Sobic001G320900 Sobic001G320900 Sobic002G082600--Sobic001G320900 Sobic004G065500 Sobic004G065500 Sobic002G082600--Sobic004G065500 Sobic003G387000 Sobic003G387000 Sobic002G082600--Sobic003G387000 Sobic001G407800 Sobic001G407800 Sobic002G082600--Sobic001G407800 Sobic003G334600 Sobic003G334600 Sobic002G082600--Sobic003G334600 Sobic010G086200 Sobic010G086200 Sobic002G082600--Sobic010G086200 Sobic005G228000--Sobic001G019900 Sobic002G212200 Sobic002G212200 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic002G345300 Sobic002G345300 Sobic005G228000--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic003G350300 Sobic003G350300 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic006G193000 Sobic006G193000 Sobic001G234300--Sobic006G193000 Sobic001G234300--Sobic002G082600 Sobic001G234300--Sobic003G021500 Sobic001G234300--Sobic002G034500 Sobic006G047000 Sobic006G047000 Sobic001G234300--Sobic006G047000 Sobic002G174200 Sobic002G174200 Sobic001G234300--Sobic002G174200 Sobic001G234300--Sobic003G364600 Sobic010G041700 Sobic010G041700 Sobic001G234300--Sobic010G041700 Sobic001G483400 Sobic001G483400 Sobic001G234300--Sobic001G483400 Sobic001G019900--Sobic001G067601 Sobic001G019900--Sobic005G228000 Sobic001G019900--Sobic009G023200 Sobic001G019900--Sobic003G350300 Sobic003G249800 Sobic003G249800 Sobic001G019900--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic001G019900--Sobic002G046100 Sobic001G445800 Sobic001G445800 Sobic001G019900--Sobic001G445800 Sobic001G019900--Sobic002G212200 Sobic003G321700 Sobic003G321700 Sobic001G019900--Sobic003G321700 Sobic001G449700--Sobic001G383700 Sobic001G449700--Sobic003G202200 Sobic003G110200 Sobic003G110200 Sobic001G449700--Sobic003G110200 Sobic007G149300 Sobic007G149300 Sobic001G449700--Sobic007G149300 Sobic001G449700--Sobic003G021500 Sobic001G449700--Sobic009G036000 Sobic001G449700--Sobic002G333400 Sobic001G259700 Sobic001G259700 Sobic001G449700--Sobic001G259700 Sobic005G186100 Sobic005G186100 Sobic001G449700--Sobic005G186100 Sobic002G092801--Sobic003G110200 Sobic002G092801--Sobic001G449700 Sobic002G092801--Sobic003G102200 Sobic002G092801--Sobic003G021500 Sobic002G092801--Sobic001G383700 Sobic007G123300 Sobic007G123300 Sobic002G092801--Sobic007G123300 Sobic002G092801--Sobic003G202200 Sobic002G092801--Sobic002G034500 Sobic002G092801--Sobic007G149300 Sobic001G281400 Sobic001G281400 Sobic002G312400--Sobic001G281400 Sobic001G499300 Sobic001G499300 Sobic002G312400--Sobic001G499300 Sobic004G187900 Sobic004G187900 Sobic002G312400--Sobic004G187900 Sobic004G332900 Sobic004G332900 Sobic002G312400--Sobic004G332900 Sobic002G211900 Sobic002G211900 Sobic002G312400--Sobic002G211900 Sobic006G173900 Sobic006G173900 Sobic002G312400--Sobic006G173900 Sobic002G312400--Sobic002G082600 Sobic002G312400--Sobic009G023200 Sobic004G177700 Sobic004G177700 Sobic002G312400--Sobic004G177700
Octagon: transcription factors


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