Gene annotation
Transcriptome id Sobic.002G092801.1
Synonym -
Functional annotation -
UniProt A0A1W0W2X7
Pfam -
Panther DB PTHR31415 PTHR31415:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g14660.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013614
Brachypodium KQK20238
Barley HORVU2Hr1G108350.1 , HORVU2Hr1G108280.1
Wheat TraesCSU02G063200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
2 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
3 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
5 Sobic.001G383700 OsCML27 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
6 Sobic.007G123300 C1-like domain containing protein, expressed -
7 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
8 Sobic.002G034500 ERD4 protein, putative, expressed -
9 Sobic.007G149300 expressed protein -
10 Sobic.003G320800 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.002G373001 - -
12 Sobic.006G131600 OsCML22 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
13 Sobic.002G403300 expressed protein -
14 Sobic.006G178500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed -
15 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
16 Sobic.003G135700 - -
17 Sobic.004G302200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
18 Sobic.001G536500 expressed protein -
19 Sobic.003G250600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsGrx_I1 - glutaredoxin subgroup III, expressed -
20 Sobic.002G319500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1


Gene co-expression network
sample Sobic002G092801 Sobic002G092801 Sobic003G110200 Sobic003G110200 Sobic002G092801--Sobic003G110200 Sobic001G449700 Sobic001G449700 Sobic002G092801--Sobic001G449700 Sobic003G102200 Sobic003G102200 Sobic002G092801--Sobic003G102200 Sobic003G021500 Sobic003G021500 Sobic002G092801--Sobic003G021500 Sobic001G383700 Sobic001G383700 Sobic002G092801--Sobic001G383700 Sobic007G123300 Sobic007G123300 Sobic002G092801--Sobic007G123300 Sobic003G202200 Sobic003G202200 Sobic002G092801--Sobic003G202200 Sobic002G034500 Sobic002G034500 Sobic002G092801--Sobic002G034500 Sobic007G149300 Sobic007G149300 Sobic002G092801--Sobic007G149300 Sobic003G110200--Sobic001G449700 Sobic003G110200--Sobic003G202200 Sobic003G110200--Sobic007G149300 Sobic003G110200--Sobic002G092801 Sobic003G110200--Sobic003G102200 Sobic003G110200--Sobic001G383700 Sobic001G481100 Sobic001G481100 Sobic003G110200--Sobic001G481100 Sobic003G110200--Sobic003G021500 Sobic005G186100 Sobic005G186100 Sobic003G110200--Sobic005G186100 Sobic001G449700--Sobic001G383700 Sobic001G449700--Sobic003G202200 Sobic001G449700--Sobic003G110200 Sobic001G449700--Sobic007G149300 Sobic001G449700--Sobic003G021500 Sobic009G036000 Sobic009G036000 Sobic001G449700--Sobic009G036000 Sobic002G333400 Sobic002G333400 Sobic001G449700--Sobic002G333400 Sobic001G259700 Sobic001G259700 Sobic001G449700--Sobic001G259700 Sobic001G449700--Sobic005G186100 Sobic003G102200--Sobic001G449700 Sobic003G102200--Sobic003G110200 Sobic001G195100 Sobic001G195100 Sobic003G102200--Sobic001G195100 Sobic003G102200--Sobic001G259700 Sobic003G102200--Sobic001G383700 Sobic003G102200--Sobic007G149300 Sobic002G342400 Sobic002G342400 Sobic003G102200--Sobic002G342400 Sobic002G373001 Sobic002G373001 Sobic003G102200--Sobic002G373001 Sobic003G250600 Sobic003G250600 Sobic003G102200--Sobic003G250600 Sobic003G364600 Sobic003G364600 Sobic003G021500--Sobic003G364600 Sobic003G021500--Sobic003G202200 Sobic003G021500--Sobic001G449700 Sobic003G021500--Sobic009G036000 Sobic003G320800 Sobic003G320800 Sobic003G021500--Sobic003G320800 Sobic003G021500--Sobic001G383700 Sobic003G021500--Sobic002G034500 Sobic002G082600 Sobic002G082600 Sobic003G021500--Sobic002G082600 Sobic002G312400 Sobic002G312400 Sobic003G021500--Sobic002G312400 Sobic001G383700--Sobic003G202200 Sobic009G247900 Sobic009G247900 Sobic001G383700--Sobic009G247900 Sobic001G383700--Sobic001G449700 Sobic001G383700--Sobic007G149300 Sobic001G383700--Sobic009G036000 Sobic006G263600 Sobic006G263600 Sobic001G383700--Sobic006G263600 Sobic004G169200 Sobic004G169200 Sobic001G383700--Sobic004G169200 Sobic004G191400 Sobic004G191400 Sobic001G383700--Sobic004G191400 Sobic002G395300 Sobic002G395300 Sobic001G383700--Sobic002G395300 Sobic007G123300--Sobic001G449700 Sobic007G123300--Sobic003G202200 Sobic007G123300--Sobic003G364600 Sobic007G123300--Sobic003G021500 Sobic007G036900 Sobic007G036900 Sobic007G123300--Sobic007G036900 Sobic007G123300--Sobic007G149300 Sobic002G245800 Sobic002G245800 Sobic007G123300--Sobic002G245800 Sobic007G123300--Sobic009G247900 Sobic007G123300--Sobic001G383700 Sobic003G202200--Sobic001G481100 Sobic003G202200--Sobic009G247900 Sobic003G202200--Sobic001G383700 Sobic003G202200--Sobic001G449700 Sobic003G202200--Sobic003G021500 Sobic003G228900 Sobic003G228900 Sobic003G202200--Sobic003G228900 Sobic003G202200--Sobic004G191400 Sobic003G202200--Sobic003G364600 Sobic003G202200--Sobic009G036000 Sobic002G034500--Sobic003G021500 Sobic002G034500--Sobic002G373001 Sobic002G034500--Sobic002G082600 Sobic005G228000 Sobic005G228000 Sobic002G034500--Sobic005G228000 Sobic001G234300 Sobic001G234300 Sobic002G034500--Sobic001G234300 Sobic001G019900 Sobic001G019900 Sobic002G034500--Sobic001G019900 Sobic002G034500--Sobic001G449700 Sobic002G034500--Sobic002G092801 Sobic002G034500--Sobic002G312400 Sobic007G149300--Sobic001G383700 Sobic007G149300--Sobic001G449700 Sobic007G149300--Sobic003G202200 Sobic010G267600 Sobic010G267600 Sobic007G149300--Sobic010G267600 Sobic007G149300--Sobic009G247900 Sobic007G149300--Sobic004G191400 Sobic007G149300--Sobic003G110200 Sobic007G149300--Sobic001G481100 Sobic009G122400 Sobic009G122400 Sobic007G149300--Sobic009G122400
Octagon: transcription factors


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