Gene annotation
Transcriptome id Sobic.003G135700.3,Sobic.003G135700.2
Synonym Sb03g011550
Functional annotation -
UniProt C5XHE6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
2 Sobic.003G192100 expressed protein -
3 Sobic.007G025500 amino acid transporter, putative, expressed -
4 Sobic.010G136000 expressed protein -
5 Sobic.002G082600 DUF567 domain containing protein, putative, expressed -
6 Sobic.001G107400 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.002G373001 - -
8 Sobic.008G032100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
10 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
11 Sobic.004G101300 expressed protein -
12 Sobic.003G320800 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
14 Sobic.004G144500 aspartic proteinase-like protein 2 precursor, putative, expressed -
15 Sobic.009G230100 expressed protein -
16 Sobic.003G417350 - -
17 Sobic.004G192100 uncharacterized Cys-rich domain containing protein, putative, expressed -
18 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
19 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
20 Sobic.003G268200 VIP1 protein, putative, expressed -


Gene co-expression network
sample Sobic003G135700 Sobic003G135700 Sobic010G268400 Sobic010G268400 Sobic003G135700--Sobic010G268400 Sobic003G192100 Sobic003G192100 Sobic003G135700--Sobic003G192100 Sobic007G025500 Sobic007G025500 Sobic003G135700--Sobic007G025500 Sobic010G136000 Sobic010G136000 Sobic003G135700--Sobic010G136000 Sobic002G082600 Sobic002G082600 Sobic003G135700--Sobic002G082600 Sobic001G107400 Sobic001G107400 Sobic003G135700--Sobic001G107400 Sobic002G373001 Sobic002G373001 Sobic003G135700--Sobic002G373001 Sobic008G032100 Sobic008G032100 Sobic003G135700--Sobic008G032100 Sobic002G312400 Sobic002G312400 Sobic003G135700--Sobic002G312400 Sobic002G329000 Sobic002G329000 Sobic010G268400--Sobic002G329000 Sobic001G516600 Sobic001G516600 Sobic010G268400--Sobic001G516600 Sobic010G268400--Sobic003G192100 Sobic005G093000 Sobic005G093000 Sobic010G268400--Sobic005G093000 Sobic010G268400--Sobic001G107400 Sobic003G037800 Sobic003G037800 Sobic010G268400--Sobic003G037800 Sobic002G245100 Sobic002G245100 Sobic010G268400--Sobic002G245100 Sobic003G429000 Sobic003G429000 Sobic010G268400--Sobic003G429000 Sobic010G195500 Sobic010G195500 Sobic010G268400--Sobic010G195500 Sobic005G018700 Sobic005G018700 Sobic003G192100--Sobic005G018700 Sobic004G101300 Sobic004G101300 Sobic003G192100--Sobic004G101300 Sobic003G037500 Sobic003G037500 Sobic003G192100--Sobic003G037500 Sobic007G155000 Sobic007G155000 Sobic003G192100--Sobic007G155000 Sobic003G192100--Sobic002G245100 Sobic001G231700 Sobic001G231700 Sobic003G192100--Sobic001G231700 Sobic001G050100 Sobic001G050100 Sobic003G192100--Sobic001G050100 Sobic001G367600 Sobic001G367600 Sobic003G192100--Sobic001G367600 Sobic004G340900 Sobic004G340900 Sobic003G192100--Sobic004G340900 Sobic002G034800 Sobic002G034800 Sobic007G025500--Sobic002G034800 Sobic001G119400 Sobic001G119400 Sobic007G025500--Sobic001G119400 Sobic003G297600 Sobic003G297600 Sobic007G025500--Sobic003G297600 Sobic002G366600 Sobic002G366600 Sobic007G025500--Sobic002G366600 Sobic009G139400 Sobic009G139400 Sobic007G025500--Sobic009G139400 Sobic010G066700 Sobic010G066700 Sobic007G025500--Sobic010G066700 Sobic009G183400 Sobic009G183400 Sobic007G025500--Sobic009G183400 Sobic009G077800 Sobic009G077800 Sobic007G025500--Sobic009G077800 Sobic007G025500--Sobic010G136000 Sobic010G136000--Sobic010G066700 Sobic010G136000--Sobic007G025500 Sobic010G136000--Sobic009G183400 Sobic003G320800 Sobic003G320800 Sobic010G136000--Sobic003G320800 Sobic007G057000 Sobic007G057000 Sobic010G136000--Sobic007G057000 Sobic010G136000--Sobic004G340900 Sobic001G038900 Sobic001G038900 Sobic010G136000--Sobic001G038900 Sobic004G259366 Sobic004G259366 Sobic010G136000--Sobic004G259366 Sobic002G188900 Sobic002G188900 Sobic010G136000--Sobic002G188900 Sobic009G036000 Sobic009G036000 Sobic002G082600--Sobic009G036000 Sobic009G036100 Sobic009G036100 Sobic002G082600--Sobic009G036100 Sobic009G159400 Sobic009G159400 Sobic002G082600--Sobic009G159400 Sobic001G320900 Sobic001G320900 Sobic002G082600--Sobic001G320900 Sobic004G065500 Sobic004G065500 Sobic002G082600--Sobic004G065500 Sobic003G387000 Sobic003G387000 Sobic002G082600--Sobic003G387000 Sobic001G407800 Sobic001G407800 Sobic002G082600--Sobic001G407800 Sobic003G334600 Sobic003G334600 Sobic002G082600--Sobic003G334600 Sobic010G086200 Sobic010G086200 Sobic002G082600--Sobic010G086200 Sobic001G107400--Sobic002G245100 Sobic004G187900 Sobic004G187900 Sobic001G107400--Sobic004G187900 Sobic001G107400--Sobic003G037800 Sobic009G141800 Sobic009G141800 Sobic001G107400--Sobic009G141800 Sobic001G107400--Sobic003G429000 Sobic001G107400--Sobic005G018700 Sobic001G281400 Sobic001G281400 Sobic001G107400--Sobic001G281400 Sobic004G321300 Sobic004G321300 Sobic001G107400--Sobic004G321300 Sobic001G107400--Sobic009G159400 Sobic001G449700 Sobic001G449700 Sobic002G373001--Sobic001G449700 Sobic002G034500 Sobic002G034500 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic003G102200 Sobic003G102200 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600 Sobic010G009300 Sobic010G009300 Sobic008G032100--Sobic010G009300 Sobic005G084600 Sobic005G084600 Sobic008G032100--Sobic005G084600 Sobic007G087200 Sobic007G087200 Sobic008G032100--Sobic007G087200 Sobic001G177800 Sobic001G177800 Sobic008G032100--Sobic001G177800 Sobic005G195301 Sobic005G195301 Sobic008G032100--Sobic005G195301 Sobic002G187500 Sobic002G187500 Sobic008G032100--Sobic002G187500 Sobic008G032100--Sobic009G077800 Sobic003G113700 Sobic003G113700 Sobic008G032100--Sobic003G113700 Sobic005G206601 Sobic005G206601 Sobic008G032100--Sobic005G206601 Sobic002G312400--Sobic001G281400 Sobic001G499300 Sobic001G499300 Sobic002G312400--Sobic001G499300 Sobic002G312400--Sobic004G187900 Sobic004G332900 Sobic004G332900 Sobic002G312400--Sobic004G332900 Sobic002G211900 Sobic002G211900 Sobic002G312400--Sobic002G211900 Sobic006G173900 Sobic006G173900 Sobic002G312400--Sobic006G173900 Sobic002G312400--Sobic002G082600 Sobic009G023200 Sobic009G023200 Sobic002G312400--Sobic009G023200 Sobic004G177700 Sobic004G177700 Sobic002G312400--Sobic004G177700
Octagon: transcription factors


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