Gene annotation
Transcriptome id Sobic.007G155000.1
Synonym ACA7, ATACA7, Sb07g022880
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed
UniProt C5YM90
Pfam PF00194
Panther DB PTHR18952 PTHR18952:SF100
NCBI CDD KOG0382; Carbonic anhydrase
KEGG Orthology K01674; carbonic anhydrase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08080 : alpha carbonic anhydrase 7
RAP-DB (Rice) LOC_Os08g36630.1 : bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a005407 , Zm00025a051587 , Zm00025a005408 , Zm00025a030633
Brachypodium KQK17706 , KQJ98653
Barley HORVU7Hr1G020190.5 , HORVU7Hr1G111510.1 , HORVU7Hr1G020190.8 , HORVU7Hr1G020190.1 , HORVU7Hr1G020190.3 , HORVU7Hr1G020190.2 , HORVU7Hr1G111510.2 , HORVU7Hr1G020190.4 , HORVU7Hr1G020190.7 , HORVU7Hr1G020190.6
Wheat TraesCS7D02G485900 , TraesCS7A02G498900 , TraesCS4A02G389200 , TraesCS4A02G388900 , TraesCS7B02G458900 , TraesCS7B02G455700 , TraesCS7A02G089500 , TraesCS7D02G523900 , TraesCS7D02G523900 , TraesCS7D02G523900 , TraesCS7A02G089600 , TraesCS7D02G084800 , TraesCS7D02G485800 , TraesCS4A02G389100 , TraesCS7D02G085200
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G155000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
3 Sobic.009G234100 WRKY49, expressed -
4 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
5 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
7 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
8 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
9 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
10 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
11 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
12 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
14 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
15 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G033900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
17 Sobic.006G234800 expressed protein -
18 Sobic.001G423800 DNA binding protein, putative, expressed -
19 Sobic.005G063100 expressed protein -
20 Sobic.003G320800 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic007G155000 Sobic007G155000 Sobic001G435000 Sobic001G435000 Sobic007G155000--Sobic001G435000 Sobic004G208700 Sobic004G208700 Sobic007G155000--Sobic004G208700 Sobic009G234100 Sobic009G234100 Sobic007G155000--Sobic009G234100 Sobic009G159400 Sobic009G159400 Sobic007G155000--Sobic009G159400 Sobic002G140400 Sobic002G140400 Sobic007G155000--Sobic002G140400 Sobic004G229800 Sobic004G229800 Sobic007G155000--Sobic004G229800 Sobic001G038900 Sobic001G038900 Sobic007G155000--Sobic001G038900 Sobic010G066700 Sobic010G066700 Sobic007G155000--Sobic010G066700 Sobic010G259600 Sobic010G259600 Sobic007G155000--Sobic010G259600 Sobic001G435000--Sobic004G208700 Sobic001G435000--Sobic004G229800 Sobic001G435000--Sobic009G159400 Sobic001G435000--Sobic007G155000 Sobic003G345100 Sobic003G345100 Sobic001G435000--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic001G435000--Sobic005G063100 Sobic005G099000 Sobic005G099000 Sobic001G435000--Sobic005G099000 Sobic008G050600 Sobic008G050600 Sobic001G435000--Sobic008G050600 Sobic001G140900 Sobic001G140900 Sobic001G435000--Sobic001G140900 Sobic004G208700--Sobic009G234100 Sobic004G208700--Sobic001G435000 Sobic004G208700--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic004G208700--Sobic003G286600 Sobic004G208700--Sobic008G050600 Sobic009G164600 Sobic009G164600 Sobic004G208700--Sobic009G164600 Sobic004G208700--Sobic009G159400 Sobic004G208700--Sobic005G063100 Sobic004G208700--Sobic007G155000 Sobic009G234100--Sobic004G208700 Sobic009G234100--Sobic005G063100 Sobic009G234100--Sobic003G345100 Sobic009G234100--Sobic003G286600 Sobic009G234100--Sobic001G435000 Sobic009G234100--Sobic008G050600 Sobic009G234100--Sobic005G099000 Sobic009G234100--Sobic007G155000 Sobic009G234100--Sobic010G259600 Sobic009G159400--Sobic001G038900 Sobic009G159400--Sobic001G435000 Sobic004G321300 Sobic004G321300 Sobic009G159400--Sobic004G321300 Sobic009G159400--Sobic003G345100 Sobic009G159400--Sobic004G208700 Sobic009G159400--Sobic001G140900 Sobic009G159400--Sobic008G050600 Sobic009G159400--Sobic010G259600 Sobic004G237800 Sobic004G237800 Sobic009G159400--Sobic004G237800 Sobic002G140400--Sobic001G038900 Sobic002G263400 Sobic002G263400 Sobic002G140400--Sobic002G263400 Sobic004G189400 Sobic004G189400 Sobic002G140400--Sobic004G189400 Sobic001G423800 Sobic001G423800 Sobic002G140400--Sobic001G423800 Sobic008G136400 Sobic008G136400 Sobic002G140400--Sobic008G136400 Sobic007G074000 Sobic007G074000 Sobic002G140400--Sobic007G074000 Sobic002G140400--Sobic004G237800 Sobic002G140400--Sobic008G050600 Sobic002G140400--Sobic003G286600 Sobic004G229800--Sobic001G435000 Sobic007G036900 Sobic007G036900 Sobic004G229800--Sobic007G036900 Sobic001G018300 Sobic001G018300 Sobic004G229800--Sobic001G018300 Sobic002G336600 Sobic002G336600 Sobic004G229800--Sobic002G336600 Sobic004G141200 Sobic004G141200 Sobic004G229800--Sobic004G141200 Sobic002G188900 Sobic002G188900 Sobic004G229800--Sobic002G188900 Sobic004G229800--Sobic004G208700 Sobic004G004500 Sobic004G004500 Sobic004G229800--Sobic004G004500 Sobic004G229800--Sobic002G140400 Sobic001G038900--Sobic002G140400 Sobic001G038900--Sobic001G140900 Sobic001G038900--Sobic008G136400 Sobic001G038900--Sobic008G050600 Sobic001G038900--Sobic001G423800 Sobic001G038900--Sobic009G159400 Sobic001G038900--Sobic003G345100 Sobic001G367600 Sobic001G367600 Sobic001G038900--Sobic001G367600 Sobic001G038900--Sobic004G189400 Sobic007G057000 Sobic007G057000 Sobic010G066700--Sobic007G057000 Sobic009G139400 Sobic009G139400 Sobic010G066700--Sobic009G139400 Sobic007G155100 Sobic007G155100 Sobic010G066700--Sobic007G155100 Sobic010G136000 Sobic010G136000 Sobic010G066700--Sobic010G136000 Sobic002G034800 Sobic002G034800 Sobic010G066700--Sobic002G034800 Sobic001G119400 Sobic001G119400 Sobic010G066700--Sobic001G119400 Sobic003G382600 Sobic003G382600 Sobic010G066700--Sobic003G382600 Sobic010G066700--Sobic007G155000 Sobic010G066700--Sobic001G038900 Sobic010G259600--Sobic009G159400 Sobic003G352300 Sobic003G352300 Sobic010G259600--Sobic003G352300 Sobic010G259600--Sobic009G234100 Sobic002G125700 Sobic002G125700 Sobic010G259600--Sobic002G125700 Sobic007G087200 Sobic007G087200 Sobic010G259600--Sobic007G087200 Sobic009G231000 Sobic009G231000 Sobic010G259600--Sobic009G231000 Sobic010G259600--Sobic001G435000 Sobic003G255200 Sobic003G255200 Sobic010G259600--Sobic003G255200 Sobic002G017800 Sobic002G017800 Sobic010G259600--Sobic002G017800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.