Gene annotation
Transcriptome id Sobic.009G234100.1
Synonym Sb09g028660, WRKY71, ATWRKY71
Functional annotation WRKY49, expressed
UniProt C5YVV8
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G18170 : WRKY DNA-binding protein 28
RAP-DB (Rice) LOC_Os05g49100.1 : WRKY49, expressed
MaizeGDB (Corn) Zm00025a056278 , Zm00025a044587 , Zm00025a043480 , Zm00025a039749 , Zm00025a037544 , Zm00025a008225 , Zm00025a028138 , Zm00025a027025 , Zm00025a038745
Brachypodium KQK04850 , KQK09077 , KQK13107 , PNT74111 , KQK08818 , KQK08819
Barley HORVU3Hr1G088200.3 , HORVU3Hr1G088200.1 , HORVU3Hr1G088200.6 , HORVU3Hr1G088200.5 , HORVU3Hr1G088200.4 , HORVU3Hr1G088200.9 , HORVU3Hr1G088200.8 , HORVU3Hr1G060500.10 , HORVU1Hr1G088300.1 , HORVU1Hr1G088300.2 , HORVU1Hr1G088300.3 , HORVU0Hr1G004890.10 , HORVU3Hr1G060500.8 , HORVU3Hr1G060500.9 , HORVU3Hr1G060500.6 , HORVU3Hr1G060500.7 , HORVU3Hr1G060500.4 , HORVU3Hr1G060500.5 , HORVU3Hr1G060500.2 , HORVU3Hr1G060500.3 , HORVU3Hr1G060500.1 , HORVU0Hr1G004890.3 , HORVU0Hr1G004890.2 , HORVU0Hr1G004890.15 , HORVU0Hr1G004890.17 , HORVU0Hr1G004890.11 , HORVU0Hr1G004890.12 , HORVU0Hr1G004890.18
Wheat TraesCS2A02G330500 , TraesCS3D02G341100 , TraesCS3B02G270500 , TraesCS3A02G347500 , TraesCS1A02G401800 , TraesCS2B02G351600 , TraesCS3B02G379200 , TraesCS3B02G379200 , TraesCS3D02G226300 , TraesCS3D02G242500 , TraesCS3A02G228600 , TraesCS2D02G332300 , TraesCS3A02G242500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
2 Sobic.005G063100 expressed protein -
3 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
4 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
5 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
7 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
8 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
9 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
10 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
11 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
12 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
13 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
14 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
15 Sobic.010G176600 - -
16 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
17 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
18 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
19 Sobic.008G136400 expressed protein -
20 Sobic.009G077800 expressed protein -


Gene co-expression network
sample Sobic009G234100 Sobic009G234100 Sobic004G208700 Sobic004G208700 Sobic009G234100--Sobic004G208700 Sobic005G063100 Sobic005G063100 Sobic009G234100--Sobic005G063100 Sobic003G345100 Sobic003G345100 Sobic009G234100--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic009G234100--Sobic003G286600 Sobic001G435000 Sobic001G435000 Sobic009G234100--Sobic001G435000 Sobic008G050600 Sobic008G050600 Sobic009G234100--Sobic008G050600 Sobic005G099000 Sobic005G099000 Sobic009G234100--Sobic005G099000 Sobic007G155000 Sobic007G155000 Sobic009G234100--Sobic007G155000 Sobic010G259600 Sobic010G259600 Sobic009G234100--Sobic010G259600 Sobic004G208700--Sobic009G234100 Sobic004G208700--Sobic001G435000 Sobic004G208700--Sobic003G345100 Sobic004G208700--Sobic003G286600 Sobic004G208700--Sobic008G050600 Sobic009G164600 Sobic009G164600 Sobic004G208700--Sobic009G164600 Sobic009G159400 Sobic009G159400 Sobic004G208700--Sobic009G159400 Sobic004G208700--Sobic005G063100 Sobic004G208700--Sobic007G155000 Sobic005G063100--Sobic008G050600 Sobic005G063100--Sobic003G345100 Sobic005G063100--Sobic003G286600 Sobic001G140900 Sobic001G140900 Sobic005G063100--Sobic001G140900 Sobic005G063100--Sobic005G099000 Sobic005G063100--Sobic009G234100 Sobic005G091500 Sobic005G091500 Sobic005G063100--Sobic005G091500 Sobic005G063100--Sobic004G208700 Sobic005G063100--Sobic001G435000 Sobic003G345100--Sobic008G050600 Sobic003G345100--Sobic005G063100 Sobic003G345100--Sobic009G164600 Sobic003G345100--Sobic001G140900 Sobic003G345100--Sobic004G208700 Sobic003G345100--Sobic005G099000 Sobic003G345100--Sobic009G159400 Sobic003G369100 Sobic003G369100 Sobic003G345100--Sobic003G369100 Sobic003G345100--Sobic001G435000 Sobic010G176600 Sobic010G176600 Sobic003G286600--Sobic010G176600 Sobic003G286600--Sobic008G050600 Sobic003G286600--Sobic005G063100 Sobic006G099900 Sobic006G099900 Sobic003G286600--Sobic006G099900 Sobic003G286600--Sobic004G208700 Sobic002G140400 Sobic002G140400 Sobic003G286600--Sobic002G140400 Sobic003G286600--Sobic003G345100 Sobic003G317100 Sobic003G317100 Sobic003G286600--Sobic003G317100 Sobic003G286600--Sobic009G164600 Sobic001G435000--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic001G435000--Sobic004G229800 Sobic001G435000--Sobic009G159400 Sobic001G435000--Sobic007G155000 Sobic001G435000--Sobic003G345100 Sobic001G435000--Sobic005G063100 Sobic001G435000--Sobic005G099000 Sobic001G435000--Sobic008G050600 Sobic001G435000--Sobic001G140900 Sobic008G050600--Sobic003G345100 Sobic008G050600--Sobic001G140900 Sobic008G050600--Sobic005G063100 Sobic008G050600--Sobic003G286600 Sobic008G050600--Sobic009G164600 Sobic001G038900 Sobic001G038900 Sobic008G050600--Sobic001G038900 Sobic008G136400 Sobic008G136400 Sobic008G050600--Sobic008G136400 Sobic004G189400 Sobic004G189400 Sobic008G050600--Sobic004G189400 Sobic005G051200 Sobic005G051200 Sobic008G050600--Sobic005G051200 Sobic005G099000--Sobic005G063100 Sobic005G099000--Sobic003G345100 Sobic003G116800 Sobic003G116800 Sobic005G099000--Sobic003G116800 Sobic004G141200 Sobic004G141200 Sobic005G099000--Sobic004G141200 Sobic001G169500 Sobic001G169500 Sobic005G099000--Sobic001G169500 Sobic005G099000--Sobic001G435000 Sobic005G099000--Sobic004G208700 Sobic005G011300 Sobic005G011300 Sobic005G099000--Sobic005G011300 Sobic001G108200 Sobic001G108200 Sobic005G099000--Sobic001G108200 Sobic007G155000--Sobic001G435000 Sobic007G155000--Sobic004G208700 Sobic007G155000--Sobic009G234100 Sobic007G155000--Sobic009G159400 Sobic007G155000--Sobic002G140400 Sobic007G155000--Sobic004G229800 Sobic007G155000--Sobic001G038900 Sobic010G066700 Sobic010G066700 Sobic007G155000--Sobic010G066700 Sobic007G155000--Sobic010G259600 Sobic010G259600--Sobic009G159400 Sobic003G352300 Sobic003G352300 Sobic010G259600--Sobic003G352300 Sobic010G259600--Sobic009G234100 Sobic002G125700 Sobic002G125700 Sobic010G259600--Sobic002G125700 Sobic007G087200 Sobic007G087200 Sobic010G259600--Sobic007G087200 Sobic009G231000 Sobic009G231000 Sobic010G259600--Sobic009G231000 Sobic010G259600--Sobic001G435000 Sobic003G255200 Sobic003G255200 Sobic010G259600--Sobic003G255200 Sobic002G017800 Sobic002G017800 Sobic010G259600--Sobic002G017800
Octagon: transcription factors


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