Gene annotation
Transcriptome id Sobic.002G336600.2,Sobic.002G336600.1,Sobic.002G336600.3
Synonym ATENT3, FUR1, Sb02g036180, ENT3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
nucleoside transporter, putative, expressed
UniProt A0A1B6QEX0
Pfam PF01733
Panther DB PTHR10332 PTHR10332:SF30
NCBI CDD KOG1479; Nucleoside transporter
KEGG Orthology K15014; SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport GO:0005337nucleoside transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT4G05120 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os07g37100.2,LOC_Os07g37100.1 : nucleoside transporter, putative, expressed
MaizeGDB (Corn) Zm00025a048363
Brachypodium KQK15804 , KQK15803 , KQK15802
Barley -
Wheat TraesCS2D02G214500 , TraesCS2B02G234300 , TraesCS2A02G207500
Populus -


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cDNA sequences
Sobic.002G336600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
2 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
3 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
4 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
5 Sobic.003G369100 AP2 domain containing protein, expressed -
6 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
9 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
10 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
12 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
13 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
14 Sobic.009G234100 WRKY49, expressed -
15 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
16 Sobic.005G063100 expressed protein -
17 Sobic.001G310600 expressed protein -
18 Sobic.003G382600 ARGOS, putative, expressed -
19 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
20 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic002G336600 Sobic002G336600 Sobic004G237800 Sobic004G237800 Sobic002G336600--Sobic004G237800 Sobic007G074000 Sobic007G074000 Sobic002G336600--Sobic007G074000 Sobic004G208700 Sobic004G208700 Sobic002G336600--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic002G336600--Sobic004G229800 Sobic003G369100 Sobic003G369100 Sobic002G336600--Sobic003G369100 Sobic001G435000 Sobic001G435000 Sobic002G336600--Sobic001G435000 Sobic002G140400 Sobic002G140400 Sobic002G336600--Sobic002G140400 Sobic004G141200 Sobic004G141200 Sobic002G336600--Sobic004G141200 Sobic003G345100 Sobic003G345100 Sobic002G336600--Sobic003G345100 Sobic004G237800--Sobic007G074000 Sobic004G321300 Sobic004G321300 Sobic004G237800--Sobic004G321300 Sobic004G237800--Sobic002G336600 Sobic004G189400 Sobic004G189400 Sobic004G237800--Sobic004G189400 Sobic002G055700 Sobic002G055700 Sobic004G237800--Sobic002G055700 Sobic004G237800--Sobic002G140400 Sobic005G091500 Sobic005G091500 Sobic004G237800--Sobic005G091500 Sobic001G112200 Sobic001G112200 Sobic004G237800--Sobic001G112200 Sobic005G063100 Sobic005G063100 Sobic004G237800--Sobic005G063100 Sobic007G074000--Sobic003G369100 Sobic007G074000--Sobic004G141200 Sobic007G074000--Sobic004G237800 Sobic007G074000--Sobic002G140400 Sobic003G228900 Sobic003G228900 Sobic007G074000--Sobic003G228900 Sobic007G074000--Sobic002G336600 Sobic003G364600 Sobic003G364600 Sobic007G074000--Sobic003G364600 Sobic001G138600 Sobic001G138600 Sobic007G074000--Sobic001G138600 Sobic009G247900 Sobic009G247900 Sobic007G074000--Sobic009G247900 Sobic009G234100 Sobic009G234100 Sobic004G208700--Sobic009G234100 Sobic004G208700--Sobic001G435000 Sobic004G208700--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic004G208700--Sobic003G286600 Sobic008G050600 Sobic008G050600 Sobic004G208700--Sobic008G050600 Sobic009G164600 Sobic009G164600 Sobic004G208700--Sobic009G164600 Sobic009G159400 Sobic009G159400 Sobic004G208700--Sobic009G159400 Sobic004G208700--Sobic005G063100 Sobic007G155000 Sobic007G155000 Sobic004G208700--Sobic007G155000 Sobic004G229800--Sobic001G435000 Sobic007G036900 Sobic007G036900 Sobic004G229800--Sobic007G036900 Sobic001G018300 Sobic001G018300 Sobic004G229800--Sobic001G018300 Sobic004G229800--Sobic002G336600 Sobic004G229800--Sobic004G141200 Sobic002G188900 Sobic002G188900 Sobic004G229800--Sobic002G188900 Sobic004G229800--Sobic004G208700 Sobic004G004500 Sobic004G004500 Sobic004G229800--Sobic004G004500 Sobic004G229800--Sobic002G140400 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic003G369100--Sobic001G138600 Sobic001G108200 Sobic001G108200 Sobic003G369100--Sobic001G108200 Sobic001G140900 Sobic001G140900 Sobic003G369100--Sobic001G140900 Sobic003G369100--Sobic001G112200 Sobic003G369100--Sobic003G345100 Sobic003G369100--Sobic008G050600 Sobic001G308300 Sobic001G308300 Sobic003G369100--Sobic001G308300 Sobic001G435000--Sobic004G208700 Sobic001G435000--Sobic004G229800 Sobic001G435000--Sobic009G159400 Sobic001G435000--Sobic007G155000 Sobic001G435000--Sobic003G345100 Sobic001G435000--Sobic005G063100 Sobic005G099000 Sobic005G099000 Sobic001G435000--Sobic005G099000 Sobic001G435000--Sobic008G050600 Sobic001G435000--Sobic001G140900 Sobic001G038900 Sobic001G038900 Sobic002G140400--Sobic001G038900 Sobic002G263400 Sobic002G263400 Sobic002G140400--Sobic002G263400 Sobic002G140400--Sobic004G189400 Sobic001G423800 Sobic001G423800 Sobic002G140400--Sobic001G423800 Sobic008G136400 Sobic008G136400 Sobic002G140400--Sobic008G136400 Sobic002G140400--Sobic007G074000 Sobic002G140400--Sobic004G237800 Sobic002G140400--Sobic008G050600 Sobic002G140400--Sobic003G286600 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic004G141200--Sobic007G074000 Sobic003G393900 Sobic003G393900 Sobic004G141200--Sobic003G393900 Sobic001G459800 Sobic001G459800 Sobic004G141200--Sobic001G459800 Sobic004G304625 Sobic004G304625 Sobic004G141200--Sobic004G304625 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G100700 Sobic004G100700 Sobic004G141200--Sobic004G100700 Sobic003G345100--Sobic008G050600 Sobic003G345100--Sobic005G063100 Sobic003G345100--Sobic009G164600 Sobic003G345100--Sobic001G140900 Sobic003G345100--Sobic004G208700 Sobic003G345100--Sobic005G099000 Sobic003G345100--Sobic009G159400 Sobic003G345100--Sobic003G369100 Sobic003G345100--Sobic001G435000
Octagon: transcription factors


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