Gene annotation
Transcriptome id Sobic.003G043600.1
Synonym Sb03g003830
Functional annotation BAHD acyl transferase (PubMedID : 28944535)
transferase family protein, putative, expressed
UniProt C5XMQ6
Pfam PF02458
Panther DB PTHR31147 PTHR31147:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT3G62160 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os01g08380.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a037059 , Zm00025a043028 , Zm00025a023184 , Zm00025a051241 , Zm00025a035759 , Zm00025a035758
Brachypodium PNT61474 , KQK17829 , KQK03007 , KQK03008
Barley HORVU1Hr1G026520.1 , HORVU1Hr1G026520.2 , HORVU3Hr1G022340.2 , HORVU3Hr1G022340.3 , HORVU3Hr1G022340.1 , HORVU3Hr1G022260.1 , HORVU3Hr1G022260.2 , HORVU3Hr1G041130.1
Wheat TraesCS7B02G257000 , TraesCS1B02G138600 , TraesCS7D02G352200 , TraesCS3D02G121600 , TraesCS3D02G121600 , TraesCS1A02G119100 , TraesCS7A02G370700 , TraesCS1D02G120000
Populus -


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cDNA sequences
Sobic.003G043600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
2 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.003G268600 - -
4 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
5 Sobic.003G442100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
6 Sobic.001G310600 expressed protein -
7 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
8 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.006G235100 expressed protein -
11 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
12 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
13 Sobic.004G041900 apoptosis-inducing factor 2, putative, expressed -
14 Sobic.003G382600 ARGOS, putative, expressed -
15 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
16 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
17 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
18 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
19 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G043600 Sobic003G043600 Sobic002G338500 Sobic002G338500 Sobic003G043600--Sobic002G338500 Sobic009G145500 Sobic009G145500 Sobic003G043600--Sobic009G145500 Sobic003G268600 Sobic003G268600 Sobic003G043600--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic003G043600--Sobic006G075400 Sobic003G442100 Sobic003G442100 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic009G184000 Sobic009G184000 Sobic003G043600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic003G043600--Sobic009G145700 Sobic001G318700 Sobic001G318700 Sobic003G043600--Sobic001G318700 Sobic002G338500--Sobic003G043600 Sobic003G382600 Sobic003G382600 Sobic002G338500--Sobic003G382600 Sobic002G055700 Sobic002G055700 Sobic002G338500--Sobic002G055700 Sobic010G156500 Sobic010G156500 Sobic002G338500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G338500--Sobic003G364300 Sobic002G338500--Sobic009G145500 Sobic002G338500--Sobic009G145700 Sobic002G353900 Sobic002G353900 Sobic002G338500--Sobic002G353900 Sobic005G196800 Sobic005G196800 Sobic002G338500--Sobic005G196800 Sobic009G145500--Sobic003G043600 Sobic003G073380 Sobic003G073380 Sobic009G145500--Sobic003G073380 Sobic004G148200 Sobic004G148200 Sobic009G145500--Sobic004G148200 Sobic001G231400 Sobic001G231400 Sobic009G145500--Sobic001G231400 Sobic009G145500--Sobic003G268600 Sobic009G145500--Sobic002G338500 Sobic006G235000 Sobic006G235000 Sobic009G145500--Sobic006G235000 Sobic009G145600 Sobic009G145600 Sobic009G145500--Sobic009G145600 Sobic006G268800 Sobic006G268800 Sobic009G145500--Sobic006G268800 Sobic003G268600--Sobic003G442100 Sobic001G330400 Sobic001G330400 Sobic003G268600--Sobic001G330400 Sobic003G268600--Sobic003G043600 Sobic003G268600--Sobic006G075400 Sobic005G086600 Sobic005G086600 Sobic003G268600--Sobic005G086600 Sobic007G017500 Sobic007G017500 Sobic003G268600--Sobic007G017500 Sobic008G066401 Sobic008G066401 Sobic003G268600--Sobic008G066401 Sobic003G064200 Sobic003G064200 Sobic003G268600--Sobic003G064200 Sobic003G268600--Sobic009G145500 Sobic006G075400--Sobic007G017500 Sobic004G294400 Sobic004G294400 Sobic006G075400--Sobic004G294400 Sobic003G228900 Sobic003G228900 Sobic006G075400--Sobic003G228900 Sobic006G075400--Sobic003G043600 Sobic006G075400--Sobic003G268600 Sobic006G075400--Sobic001G330400 Sobic003G432700 Sobic003G432700 Sobic006G075400--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic006G075400--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic006G075400--Sobic001G502400 Sobic003G442100--Sobic003G268600 Sobic003G442100--Sobic001G310600 Sobic003G442100--Sobic003G043600 Sobic006G235100 Sobic006G235100 Sobic003G442100--Sobic006G235100 Sobic001G259900 Sobic001G259900 Sobic003G442100--Sobic001G259900 Sobic006G007900 Sobic006G007900 Sobic003G442100--Sobic006G007900 Sobic004G191400 Sobic004G191400 Sobic003G442100--Sobic004G191400 Sobic003G442100--Sobic006G075400 Sobic003G442100--Sobic005G086600 Sobic001G310600--Sobic003G442100 Sobic001G310600--Sobic003G043600 Sobic001G112200 Sobic001G112200 Sobic001G310600--Sobic001G112200 Sobic001G310600--Sobic006G075400 Sobic001G310600--Sobic001G502400 Sobic001G310600--Sobic001G318700 Sobic002G336600 Sobic002G336600 Sobic001G310600--Sobic002G336600 Sobic001G310600--Sobic009G184000 Sobic001G079300 Sobic001G079300 Sobic001G310600--Sobic001G079300 Sobic009G184000--Sobic001G112200 Sobic007G169700 Sobic007G169700 Sobic009G184000--Sobic007G169700 Sobic009G184000--Sobic006G235100 Sobic009G184000--Sobic001G502400 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic001G138600 Sobic001G138600 Sobic009G184000--Sobic001G138600 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100 Sobic009G145700--Sobic009G145600 Sobic009G145700--Sobic008G066401 Sobic008G066200 Sobic008G066200 Sobic009G145700--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic009G145700--Sobic006G008000 Sobic009G145700--Sobic001G112200 Sobic009G145700--Sobic003G043600 Sobic003G043500 Sobic003G043500 Sobic009G145700--Sobic003G043500 Sobic009G145700--Sobic009G184000 Sobic003G079200 Sobic003G079200 Sobic009G145700--Sobic003G079200 Sobic001G318700--Sobic001G112200 Sobic001G018300 Sobic001G018300 Sobic001G318700--Sobic001G018300 Sobic004G243100 Sobic004G243100 Sobic001G318700--Sobic004G243100 Sobic002G192000 Sobic002G192000 Sobic001G318700--Sobic002G192000 Sobic003G303100 Sobic003G303100 Sobic001G318700--Sobic003G303100 Sobic002G251000 Sobic002G251000 Sobic001G318700--Sobic002G251000 Sobic001G140900 Sobic001G140900 Sobic001G318700--Sobic001G140900 Sobic001G318700--Sobic006G075400 Sobic001G481100 Sobic001G481100 Sobic001G318700--Sobic001G481100
Octagon: transcription factors


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