Gene annotation
Transcriptome id Sobic.002G338500.1
Synonym ATSTP1, STP1, Sb02g036310,
Functional annotation sugar transporter 1 (PubMedID : 26465154)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter family protein, putative, expressed
UniProt C5XBJ4
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF124
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G11260 : sugar transporter 1
RAP-DB (Rice) LOC_Os07g37320.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a030010 , Zm00025a034851 , Zm00025a048377 , Zm00025a001328 , Zm00025a006257 , Zm00025a028431 , Zm00025a044857 , Zm00025a050081 , Zm00025a015345
Brachypodium KQK04292 , KQK22858 , KQJ95161 , KQK17831 , KQJ82916 , KQK14067 , PNT72210 , KQJ89755 , KQJ89757 , KQJ90241 , KQK15772 , KQJ93434
Barley HORVU3Hr1G102860.6 , HORVU3Hr1G102860.7 , HORVU3Hr1G102860.5 , HORVU3Hr1G102860.2 , HORVU3Hr1G102860.3 , HORVU3Hr1G102860.1 , HORVU4Hr1G067450.7 , HORVU4Hr1G067450.4 , HORVU4Hr1G067450.5 , HORVU4Hr1G067450.3 , HORVU4Hr1G067450.1 , HORVU4Hr1G067450.8 , HORVU2Hr1G041080.2 , HORVU2Hr1G041080.1 , HORVU2Hr1G041080.6 , HORVU2Hr1G041080.5 , HORVU2Hr1G064160.1 , HORVU2Hr1G064160.3 , HORVU2Hr1G064160.2 , HORVU2Hr1G064160.5 , HORVU2Hr1G064160.4 , HORVU2Hr1G064160.6 , HORVU2Hr1G064160.9 , HORVU4Hr1G067450.10 , HORVU2Hr1G064160.11 , HORVU2Hr1G064160.10 , HORVU2Hr1G064160.12 , HORVU7Hr1G069030.1 , HORVU7Hr1G069030.2 , HORVU7Hr1G069030.5 , HORVU7Hr1G069030.6 , HORVU5Hr1G054140.5 , HORVU2Hr1G041080.9 , HORVU2Hr1G041080.8 , HORVU2Hr1G041080.3 , HORVU2Hr1G041080.7 , HORVU2Hr1G041080.4 , HORVU5Hr1G054140.4 , HORVU5Hr1G054140.3 , HORVU5Hr1G054140.2 , HORVU5Hr1G054140.1
Wheat TraesCS6B02G162200 , TraesCS2A02G205500 , TraesCS4A02G066200 , TraesCS7D02G286600 , TraesCS3B02G518800 , TraesCS3D02G470200 , TraesCS3D02G470300 , TraesCS5D02G001600 , TraesCS3B02G518900 , TraesCS4D02G243100 , TraesCS4B02G243500 , TraesCS2B02G232900 , TraesCS2A02G259500 , TraesCS7A02G288800 , TraesCS2D02G264200 , TraesCS3A02G475200 , TraesCS7B02G185800 , TraesCS5B02G001000 , TraesCS2B02G282400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
2 Sobic.003G382600 ARGOS, putative, expressed -
3 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
4 Sobic.010G156500 expressed protein -
5 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
9 Sobic.005G196800 membrane protein, putative, expressed -
10 Sobic.010G043900 expressed protein -
11 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
13 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
14 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
15 Sobic.004G203700 ubiquitin family protein, putative, expressed -
16 Sobic.001G310600 expressed protein -
17 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
18 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -
20 Sobic.001G279500 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G338500 Sobic002G338500 Sobic003G043600 Sobic003G043600 Sobic002G338500--Sobic003G043600 Sobic003G382600 Sobic003G382600 Sobic002G338500--Sobic003G382600 Sobic002G055700 Sobic002G055700 Sobic002G338500--Sobic002G055700 Sobic010G156500 Sobic010G156500 Sobic002G338500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G338500--Sobic003G364300 Sobic009G145500 Sobic009G145500 Sobic002G338500--Sobic009G145500 Sobic009G145700 Sobic009G145700 Sobic002G338500--Sobic009G145700 Sobic002G353900 Sobic002G353900 Sobic002G338500--Sobic002G353900 Sobic005G196800 Sobic005G196800 Sobic002G338500--Sobic005G196800 Sobic003G043600--Sobic002G338500 Sobic003G043600--Sobic009G145500 Sobic003G268600 Sobic003G268600 Sobic003G043600--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic003G043600--Sobic006G075400 Sobic003G442100 Sobic003G442100 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic009G184000 Sobic009G184000 Sobic003G043600--Sobic009G184000 Sobic003G043600--Sobic009G145700 Sobic001G318700 Sobic001G318700 Sobic003G043600--Sobic001G318700 Sobic003G382600--Sobic002G055700 Sobic004G189400 Sobic004G189400 Sobic003G382600--Sobic004G189400 Sobic003G382600--Sobic002G338500 Sobic003G382600--Sobic002G353900 Sobic003G303100 Sobic003G303100 Sobic003G382600--Sobic003G303100 Sobic004G237800 Sobic004G237800 Sobic003G382600--Sobic004G237800 Sobic005G091500 Sobic005G091500 Sobic003G382600--Sobic005G091500 Sobic008G050600 Sobic008G050600 Sobic003G382600--Sobic008G050600 Sobic003G382600--Sobic003G043600 Sobic002G055700--Sobic003G303100 Sobic002G055700--Sobic003G382600 Sobic002G055700--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic002G055700--Sobic003G426400 Sobic002G055700--Sobic002G353900 Sobic004G148200 Sobic004G148200 Sobic002G055700--Sobic004G148200 Sobic002G055700--Sobic004G189400 Sobic002G055700--Sobic002G338500 Sobic001G367600 Sobic001G367600 Sobic002G055700--Sobic001G367600 Sobic010G156500--Sobic003G364300 Sobic010G156500--Sobic002G338500 Sobic003G364000 Sobic003G364000 Sobic010G156500--Sobic003G364000 Sobic010G156500--Sobic003G382600 Sobic005G213500 Sobic005G213500 Sobic010G156500--Sobic005G213500 Sobic001G279500 Sobic001G279500 Sobic010G156500--Sobic001G279500 Sobic002G302500 Sobic002G302500 Sobic010G156500--Sobic002G302500 Sobic003G280200 Sobic003G280200 Sobic010G156500--Sobic003G280200 Sobic009G231000 Sobic009G231000 Sobic010G156500--Sobic009G231000 Sobic003G364300--Sobic010G156500 Sobic003G364300--Sobic009G231000 Sobic003G364300--Sobic002G338500 Sobic003G364300--Sobic003G364000 Sobic007G008100 Sobic007G008100 Sobic003G364300--Sobic007G008100 Sobic002G042000 Sobic002G042000 Sobic003G364300--Sobic002G042000 Sobic003G364300--Sobic003G382600 Sobic001G054500 Sobic001G054500 Sobic003G364300--Sobic001G054500 Sobic003G364300--Sobic002G302500 Sobic009G145500--Sobic003G043600 Sobic003G073380 Sobic003G073380 Sobic009G145500--Sobic003G073380 Sobic009G145500--Sobic004G148200 Sobic001G231400 Sobic001G231400 Sobic009G145500--Sobic001G231400 Sobic009G145500--Sobic003G268600 Sobic009G145500--Sobic002G338500 Sobic006G235000 Sobic006G235000 Sobic009G145500--Sobic006G235000 Sobic009G145600 Sobic009G145600 Sobic009G145500--Sobic009G145600 Sobic006G268800 Sobic006G268800 Sobic009G145500--Sobic006G268800 Sobic009G145700--Sobic009G145600 Sobic008G066401 Sobic008G066401 Sobic009G145700--Sobic008G066401 Sobic008G066200 Sobic008G066200 Sobic009G145700--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic009G145700--Sobic006G008000 Sobic001G112200 Sobic001G112200 Sobic009G145700--Sobic001G112200 Sobic009G145700--Sobic003G043600 Sobic003G043500 Sobic003G043500 Sobic009G145700--Sobic003G043500 Sobic009G145700--Sobic009G184000 Sobic003G079200 Sobic003G079200 Sobic009G145700--Sobic003G079200 Sobic002G353900--Sobic002G055700 Sobic002G353900--Sobic003G382600 Sobic002G353900--Sobic001G367600 Sobic002G353900--Sobic002G302500 Sobic002G192000 Sobic002G192000 Sobic002G353900--Sobic002G192000 Sobic009G221400 Sobic009G221400 Sobic002G353900--Sobic009G221400 Sobic009G139400 Sobic009G139400 Sobic002G353900--Sobic009G139400 Sobic006G158600 Sobic006G158600 Sobic002G353900--Sobic006G158600 Sobic009G234100 Sobic009G234100 Sobic002G353900--Sobic009G234100 Sobic001G247300 Sobic001G247300 Sobic005G196800--Sobic001G247300 Sobic005G196800--Sobic004G237800 Sobic001G390300 Sobic001G390300 Sobic005G196800--Sobic001G390300 Sobic005G196800--Sobic002G338500 Sobic004G321300 Sobic004G321300 Sobic005G196800--Sobic004G321300 Sobic006G183400 Sobic006G183400 Sobic005G196800--Sobic006G183400 Sobic005G196800--Sobic003G382600 Sobic005G196800--Sobic003G043600 Sobic005G196800--Sobic002G055700
Octagon: transcription factors


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